Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:42 (4008019): wrapper (7.7.26015): starting
03:02:42 (4008019): wrapper: running run_atlas (--nthreads 2)
[2025-10-21 03:02:42] Arguments: --nthreads 2
[2025-10-21 03:02:42] Threads: 2
[2025-10-21 03:02:42] Checking for CVMFS
[2025-10-21 03:02:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 03:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 03:02:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 03:02:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 03:02:45] 2.9.2.0 4008214 0 29956 151940 4 1 28625423 36864000 0 130560 0 0 0.000 1291 28065 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 03:02:45] CVMFS is ok
[2025-10-21 03:02:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 03:02:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 03:02:45] Further information can be found at the LHC@home message board.
[2025-10-21 03:02:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 03:02:45] Checking for apptainer binary...
[2025-10-21 03:02:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 03:02:45] Running /usr/bin/apptainer --version
[2025-10-21 03:02:45] apptainer version 1.4.1-1.1
[2025-10-21 03:02:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 03:02:46] madmaxA275
[2025-10-21 03:02:46] apptainer works
[2025-10-21 03:02:47] Set ATHENA_PROC_NUMBER=2
[2025-10-21 03:02:47] Set ATHENA_CORE_NUMBER=2
[2025-10-21 03:02:47] Starting ATLAS job with PandaID=6852947725
[2025-10-21 03:02:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 05:19:32]  *** The last 200 lines of the pilot log: ***
[2025-10-21 05:19:32] 2025-10-21 03:19:01,571 | INFO     | did not find any defunct processes belonging to 4018687
[2025-10-21 05:19:32] 2025-10-21 03:19:01,572 | INFO     | did not find any defunct processes belonging to 4018687
[2025-10-21 05:19:32] 2025-10-21 03:19:01,572 | INFO     | ready for new job
[2025-10-21 05:19:32] 2025-10-21 03:19:01,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 05:19:32] 2025-10-21 03:19:01,573 | INFO     | ***************************************
[2025-10-21 05:19:32] 2025-10-21 03:19:01,573 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 05:19:32] 2025-10-21 03:19:01,573 | INFO     | ***************************************
[2025-10-21 05:19:32] 2025-10-21 03:19:01,573 | INFO     | 
[2025-10-21 05:19:32] 2025-10-21 03:19:01,573 | INFO     | architecture information:
[2025-10-21 05:19:32] 2025-10-21 03:19:01,573 | INFO     | executing command: cat /etc/os-release
[2025-10-21 05:19:32] 2025-10-21 03:19:01,581 | INFO     | cat /etc/os-release:
[2025-10-21 05:19:32] NAME="CentOS Linux"
[2025-10-21 05:19:32] VERSION="7 (Core)"
[2025-10-21 05:19:32] ID="centos"
[2025-10-21 05:19:32] ID_LIKE="rhel fedora"
[2025-10-21 05:19:32] VERSION_ID="7"
[2025-10-21 05:19:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 05:19:32] ANSI_COLOR="0;31"
[2025-10-21 05:19:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 05:19:32] HOME_URL="https://www.centos.org/"
[2025-10-21 05:19:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 05:19:32] 
[2025-10-21 05:19:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 05:19:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 05:19:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 05:19:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 05:19:32] 
[2025-10-21 05:19:32] 2025-10-21 03:19:01,581 | INFO     | ***************************************
[2025-10-21 05:19:32] 2025-10-21 03:19:02,085 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 05:19:32] 2025-10-21 03:19:02,117 | INFO     | sufficient remaining disk space (256401997824 B)
[2025-10-21 05:19:32] 2025-10-21 03:19:02,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 05:19:32] 2025-10-21 03:19:02,118 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 05:19:32] 2025-10-21 03:19:02,119 | INFO     | update_server=False
[2025-10-21 05:19:32] 2025-10-21 03:19:02,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 05:19:32] 2025-10-21 03:19:02,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 05:19:32] 2025-10-21 03:19:02,163 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 05:19:32] 2025-10-21 03:19:02,163 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 05:19:32] 2025-10-21 03:19:02,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 05:19:32] 2025-10-21 03:19:02,164 | INFO     | will abort loop
[2025-10-21 05:19:32] 2025-10-21 03:19:02,713 | INFO     | all payload control threads have been joined
[2025-10-21 05:19:32] 2025-10-21 03:19:03,049 | INFO     | all data control threads have been joined
[2025-10-21 05:19:32] 2025-10-21 03:19:03,125 | INFO     | [job] retrieve thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,125 | INFO     | [job] queue monitor thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 05:19:32] 2025-10-21 03:19:03,170 | INFO     | [job] job monitor thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,514 | INFO     | [payload] validate_post thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,591 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,658 | INFO     | all job control threads have been joined
[2025-10-21 05:19:32] 2025-10-21 03:19:03,708 | INFO     | [data] copytool_in thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,719 | INFO     | [payload] control thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,877 | INFO     | [job] validate thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:03,924 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:04,055 | INFO     | [data] control thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:04,061 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:04,600 | INFO     | [payload] failed_post thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:04,664 | INFO     | [job] control thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:05,154 | INFO     | [data] copytool_out thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:05,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 05:19:32] 2025-10-21 03:19:09,539 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:12,398 | INFO     | job.realtimelogging is not enabled
[2025-10-21 05:19:32] 2025-10-21 03:19:13,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 05:19:32] 2025-10-21 03:19:13,862 | INFO     | [monitor] cgroup control has ended
[2025-10-21 05:19:32] 2025-10-21 03:19:15,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460862809920)>', '<ExcThread(monitor, started 140460370675456)>']
[2025-10-21 05:19:32] 2025-10-21 03:19:20,590 | INFO     | all workflow threads have been joined
[2025-10-21 05:19:32] 2025-10-21 03:19:20,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 05:19:32] 2025-10-21 03:19:20,592 | INFO     | traces error code: 0
[2025-10-21 05:19:32] 2025-10-21 03:19:20,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 05:19:32] 2025-10-21 03:19:32,156 | INFO     | PID=4012271 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 05:19:32] 2025-10-21 03:19:32,157 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 05:19:32] 2025-10-21 03:19:32,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 05:19:32] 2025-10-21 03:19:32,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 05:19:32] 2025-10-21 03:19:32,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 05:19:32] 2025-10-21 03:19:32,157 | INFO     | [monitor] control thread has ended
[2025-10-21 05:19:32] 2025-10-21 03:19:32,196 [wrapper] ==== pilot stdout END ====
[2025-10-21 05:19:32] 2025-10-21 03:19:32,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 05:19:32] 2025-10-21 03:19:32,201 [wrapper] pilotpid: 4012271
[2025-10-21 05:19:32] 2025-10-21 03:19:32,203 [wrapper] Pilot exit status: 0
[2025-10-21 05:19:32] 2025-10-21 03:19:32,208 [wrapper] pandaids: 6852947725
[2025-10-21 05:19:32] 2025-10-21 03:19:32,220 [wrapper] cleanup supervisor_pilot 4035101 4012272
[2025-10-21 05:19:32] 2025-10-21 03:19:32,223 [wrapper] Test setup, not cleaning
[2025-10-21 05:19:32] 2025-10-21 03:19:32,226 [wrapper] apfmon messages muted
[2025-10-21 05:19:32] 2025-10-21 03:19:32,227 [wrapper] ==== wrapper stdout END ====
[2025-10-21 05:19:32] 2025-10-21 03:19:32,229 [wrapper] ==== wrapper stderr END ====
[2025-10-21 05:19:32]  *** Error codes and diagnostics ***
[2025-10-21 05:19:32]     "exeErrorCode": 0,
[2025-10-21 05:19:32]     "exeErrorDiag": "",
[2025-10-21 05:19:32]     "pilotErrorCode": 0,
[2025-10-21 05:19:32]     "pilotErrorDiag": "",
[2025-10-21 05:19:32]  *** Listing of results directory ***
[2025-10-21 05:19:32] total 432164
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc    557409 Oct 20 23:57 pilot3.tar.gz
[2025-10-21 05:19:32] -rwx------ 1 boinc boinc     36292 Oct 21 00:34 runpilot2-wrapper.sh
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc      5112 Oct 21 00:34 queuedata.json
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc       100 Oct 21 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 05:19:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 03:02 run_atlas
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc       105 Oct 21 03:02 job.xml
[2025-10-21 05:19:32] -rw-r--r-- 2 boinc boinc 226018198 Oct 21 03:02 EVNT.46771634._002137.pool.root.1
[2025-10-21 05:19:32] -rw-r--r-- 2 boinc boinc    569668 Oct 21 03:02 input.tar.gz
[2025-10-21 05:19:32] -rw-r--r-- 2 boinc boinc     15120 Oct 21 03:02 start_atlas.sh
[2025-10-21 05:19:32] drwxrwx--x 2 boinc boinc      4096 Oct 21 03:02 shared
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc         0 Oct 21 03:02 boinc_setup_complete
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc      6208 Oct 21 03:02 init_data.xml
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc         0 Oct 21 03:02 boinc_lockfile
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc      2558 Oct 21 03:02 pandaJob.out
[2025-10-21 05:19:32] -rw------- 1 boinc boinc    978838 Oct 21 03:03 agis_schedconf.cvmfs.json
[2025-10-21 05:19:32] -rw------- 1 boinc boinc   1560740 Oct 21 03:03 agis_ddmendpoints.agis.ALL.json
[2025-10-21 05:19:32] drwx------ 5 boinc boinc      4096 Oct 21 03:03 pilot3
[2025-10-21 05:19:32] -rw------- 1 boinc boinc 209731710 Oct 21 05:18 HITS.46771637._053910.pool.root.1
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc       529 Oct 21 05:18 boinc_task_state.xml
[2025-10-21 05:19:32] -rw------- 1 boinc boinc        95 Oct 21 05:18 pilot_heartbeat.json
[2025-10-21 05:19:32] -rw------- 1 boinc boinc      1024 Oct 21 05:18 memory_monitor_summary.json
[2025-10-21 05:19:32] -rw------- 1 boinc boinc    271349 Oct 21 05:18 log.46771637._053910.job.log.tgz.1
[2025-10-21 05:19:32] -rw------- 1 boinc boinc      7751 Oct 21 05:19 heartbeat.json
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc        27 Oct 21 05:19 wrapper_checkpoint.txt
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc      8192 Oct 21 05:19 boinc_mmap_file
[2025-10-21 05:19:32] -rw------- 1 boinc boinc       747 Oct 21 05:19 pilotlog.txt
[2025-10-21 05:19:32] -rw------- 1 boinc boinc   1171810 Oct 21 05:19 log.46771637._053910.job.log.1
[2025-10-21 05:19:32] -rw------- 1 boinc boinc       357 Oct 21 05:19 output.list
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc       620 Oct 21 05:19 runtime_log
[2025-10-21 05:19:32] -rw------- 1 boinc boinc   1464320 Oct 21 05:19 result.tar.gz
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc      8797 Oct 21 05:19 runtime_log.err
[2025-10-21 05:19:32] -rw------- 1 boinc boinc       663 Oct 21 05:19 3TIKDmSdDV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNtzNDmZv31Ho.diag
[2025-10-21 05:19:32] -rw-r--r-- 1 boinc boinc     10072 Oct 21 05:19 stderr.txt
[2025-10-21 05:19:32] HITS file was successfully produced:
[2025-10-21 05:19:32] -rw------- 1 boinc boinc 209731710 Oct 21 05:18 shared/HITS.pool.root.1
[2025-10-21 05:19:32]  *** Contents of shared directory: ***
[2025-10-21 05:19:32] total 427560
[2025-10-21 05:19:32] -rw-r--r-- 2 boinc boinc 226018198 Oct 21 03:02 ATLAS.root_0
[2025-10-21 05:19:32] -rw-r--r-- 2 boinc boinc    569668 Oct 21 03:02 input.tar.gz
[2025-10-21 05:19:32] -rw-r--r-- 2 boinc boinc     15120 Oct 21 03:02 start_atlas.sh
[2025-10-21 05:19:32] -rw------- 1 boinc boinc 209731710 Oct 21 05:18 HITS.pool.root.1
[2025-10-21 05:19:32] -rw------- 1 boinc boinc   1464320 Oct 21 05:19 result.tar.gz
05:19:33 (4008019): run_atlas exited; CPU time 15846.359847
05:19:33 (4008019): called boinc_finish(0)

</stderr_txt>
]]>

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