Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:11:09 (1436938): wrapper (7.7.26015): starting
18:11:09 (1436938): wrapper: running run_atlas (--nthreads 12)
[2025-10-20 18:11:09] Arguments: --nthreads 12
[2025-10-20 18:11:09] Threads: 12
[2025-10-20 18:11:09] Checking for CVMFS
[2025-10-20 18:11:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 18:11:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 18:11:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 18:11:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 18:11:10] 2.11.5.0 2538 43778 249988 151940 1 1006 24071652 45568001 12415 130560 0 457395009 99.878 180563242 25692 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-20 18:11:10] CVMFS is ok
[2025-10-20 18:11:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 18:11:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 18:11:10] Further information can be found at the LHC@home message board.
[2025-10-20 18:11:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 18:11:10] Checking for apptainer binary...
[2025-10-20 18:11:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 18:11:10] Running /usr/bin/apptainer --version
[2025-10-20 18:11:10] apptainer version 1.4.1-1.el9
[2025-10-20 18:11:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 18:11:10] wns0038.triumf.lcg
[2025-10-20 18:11:10] apptainer works
[2025-10-20 18:11:10] Set ATHENA_PROC_NUMBER=12
[2025-10-20 18:11:10] Set ATHENA_CORE_NUMBER=12
[2025-10-20 18:11:10] Starting ATLAS job with PandaID=6852953647
[2025-10-20 18:11:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 18:14:39]  *** The last 200 lines of the pilot log: ***
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | found no stored workdir sizes
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | will not add max space = 0 B to job metrics
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | WARNING  | wrong length of table data, x=[1761009104.0], y=[1171.0] (must be same and length>=4)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | could have reported an average CPU frequency of 2492 MHz (4 samples)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | ..............................
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | . Timing measurements:
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . get job = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . initial setup = 2 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . payload setup = 5 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . stage-in = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . payload execution = 16 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . stage-out = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . log creation = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | ..............................
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6852953647/pilotlog.txt
[2025-10-20 18:14:39] 2025-10-21 01:14:07,434 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-20 18:14:39] - Log from pilotlog.txt -
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | found no stored workdir sizes
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | will not add max space = 0 B to job metrics
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | WARNING  | wrong length of table data, x=[1761009104.0], y=[1171.0] (must be same and length>=4)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | could have reported an average CPU frequency of 2492 MHz (4 samples)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | ..............................
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | . Timing measurements:
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . get job = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . initial setup = 2 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . payload setup = 5 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . stage-in = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . payload execution = 16 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . stage-out = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . log creation = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | ..............................
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6852953647/pilotlog.txt
[2025-10-20 18:14:39] 2025-10-21 01:14:07,435 | WARNING  | 
[2025-10-20 18:14:39] [begin log extracts]
[2025-10-20 18:14:39] - Log from pilotlog.txt -
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 18:14:39] 2025-10-21 01:14:07,419 | WARNING  | found no stored workdir sizes
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | will not add max space = 0 B to job metrics
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | WARNING  | wrong length of table data, x=[1761009104.0], y=[1171.0] (must be same and length>=4)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | could have reported an average CPU frequency of 2492 MHz (4 samples)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | ..............................
[2025-10-20 18:14:39] 2025-10-21 01:14:07,420 | INFO     | . Timing measurements:
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . get job = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . initial setup = 2 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . payload setup = 5 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . stage-in = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . payload execution = 16 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . stage-out = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | . log creation = 0 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | ..............................
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-20 18:14:39] 2025-10-21 01:14:07,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6852953647/pilotlog.txt
[2025-10-20 18:14:39] [end log extracts]
[2025-10-20 18:14:39] 2025-10-21 01:14:07,435 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,436 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-20 18:14:39] 2025-10-21 01:14:07,975 | INFO     | 
[2025-10-20 18:14:39] 2025-10-21 01:14:07,975 | INFO     | job summary report
[2025-10-20 18:14:39] 2025-10-21 01:14:07,975 | INFO     | --------------------------------------------------
[2025-10-20 18:14:39] 2025-10-21 01:14:07,975 | INFO     | PanDA job id: 6852953647
[2025-10-20 18:14:39] 2025-10-21 01:14:07,975 | INFO     | task id: 46771637
[2025-10-20 18:14:39] 2025-10-21 01:14:07,975 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-20 18:11:51,241 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | pilot state: failed 
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | transexitcode: 65
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | exeerrorcode: 65
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | exitcode: 65
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | cpuconsumptiontime: 18 s
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | nevents: 0
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | neventsw: 0
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | pid: 1447102
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | pgrp: 1447102
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | corecount: 12
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | event service: False
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | sizes: {0: 2348928, 4: 2349190, 10: 2349218, 25: 2376740, 28: 2376740, 153: 2376906}
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | --------------------------------------------------
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | 
[2025-10-20 18:14:39] 2025-10-21 01:14:07,976 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | job 6852953647 has completed (purged errors)
[2025-10-20 18:14:39] 2025-10-21 01:14:08,069 | INFO     | overall cleanup function is called
[2025-10-20 18:14:39] 2025-10-21 01:14:09,076 | INFO     | --- collectZombieJob: --- 10, [1447102]
[2025-10-20 18:14:39] 2025-10-21 01:14:09,076 | INFO     | zombie collector waiting for pid 1447102
[2025-10-20 18:14:39] 2025-10-21 01:14:09,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 18:14:39] 2025-10-21 01:14:09,077 | INFO     | collected zombie processes
[2025-10-20 18:14:39] 2025-10-21 01:14:09,077 | INFO     | will attempt to kill all subprocesses of pid=1447102
[2025-10-20 18:14:39] 2025-10-21 01:14:09,286 | INFO     | process IDs to be killed: [1447102] (in reverse order)
[2025-10-20 18:14:39] 2025-10-21 01:14:09,360 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 18:14:39] 2025-10-21 01:14:09,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 18:14:39] 2025-10-21 01:14:09,379 | INFO     | did not find any defunct processes belonging to 1447102
[2025-10-20 18:14:39] 2025-10-21 01:14:09,414 | INFO     | did not find any defunct processes belonging to 1447102
[2025-10-20 18:14:39] 2025-10-21 01:14:09,414 | INFO     | ready for new job
[2025-10-20 18:14:39] 2025-10-21 01:14:09,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 18:14:39] 2025-10-21 01:14:09,428 | INFO     | ***************************************
[2025-10-20 18:14:39] 2025-10-21 01:14:09,428 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 18:14:39] 2025-10-21 01:14:09,428 | INFO     | ***************************************
[2025-10-20 18:14:39] 2025-10-21 01:14:09,428 | INFO     | 
[2025-10-20 18:14:39] 2025-10-21 01:14:09,430 | INFO     | architecture information:
[2025-10-20 18:14:39] 2025-10-21 01:14:09,431 | INFO     | executing command: cat /etc/os-release
[2025-10-20 18:14:39] 2025-10-21 01:14:09,444 | INFO     | cat /etc/os-release:
[2025-10-20 18:14:39] NAME="CentOS Linux"
[2025-10-20 18:14:39] VERSION="7 (Core)"
[2025-10-20 18:14:39] ID="centos"
[2025-10-20 18:14:39] ID_LIKE="rhel fedora"
[2025-10-20 18:14:39] VERSION_ID="7"
[2025-10-20 18:14:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 18:14:39] ANSI_COLOR="0;31"
[2025-10-20 18:14:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 18:14:39] HOME_URL="https://www.centos.org/"
[2025-10-20 18:14:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 18:14:39] 
[2025-10-20 18:14:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 18:14:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 18:14:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 18:14:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 18:14:39] 
[2025-10-20 18:14:39] 2025-10-21 01:14:09,444 | INFO     | ***************************************
[2025-10-20 18:14:39] 2025-10-21 01:14:09,950 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-20 18:14:39] 2025-10-21 01:14:09,994 | INFO     | sufficient remaining disk space (2020146675712 B)
[2025-10-20 18:14:39] 2025-10-21 01:14:09,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 18:14:39] 2025-10-21 01:14:09,995 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 18:14:39] 2025-10-21 01:14:09,995 | INFO     | update_server=False
[2025-10-20 18:14:39] 2025-10-21 01:14:09,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 18:14:39] 2025-10-21 01:14:09,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 18:14:39] 2025-10-21 01:14:09,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 18:14:39] 2025-10-21 01:14:10,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 18:14:39] 2025-10-21 01:14:10,024 | INFO     | aborting loop
[2025-10-20 18:14:39] 2025-10-21 01:14:10,346 | INFO     | all job control threads have been joined
[2025-10-20 18:14:39] 2025-10-21 01:14:10,720 | INFO     | all data control threads have been joined
[2025-10-20 18:14:39] 2025-10-21 01:14:11,001 | INFO     | [job] retrieve thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,029 | INFO     | [job] job monitor thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,249 | INFO     | all payload control threads have been joined
[2025-10-20 18:14:39] 2025-10-21 01:14:11,278 | INFO     | [payload] failed_post thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,353 | INFO     | [job] control thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,559 | INFO     | [data] copytool_in thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,674 | INFO     | [payload] validate_post thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,726 | INFO     | [data] control thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,903 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:11,937 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:12,003 | INFO     | [data] copytool_out thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:12,112 | INFO     | [job] validate thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:12,250 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:12,255 | INFO     | [payload] control thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:12,323 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:12,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 18:14:39] 2025-10-21 01:14:13,522 | INFO     | [job] queue monitor thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:14,004 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 18:14:39] 2025-10-21 01:14:19,257 | INFO     | [monitor] cgroup control has ended
[2025-10-20 18:14:39] 2025-10-21 01:14:20,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209728374592)>', '<ExcThread(monitor, started 140209173804800)>']
[2025-10-20 18:14:39] 2025-10-21 01:14:25,356 | INFO     | all workflow threads have been joined
[2025-10-20 18:14:39] 2025-10-21 01:14:25,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 18:14:39] 2025-10-21 01:14:25,357 | INFO     | traces error code: 0
[2025-10-20 18:14:39] 2025-10-21 01:14:25,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 18:14:39] 2025-10-21 01:14:39,428 | INFO     | PID=1440578 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 18:14:39] 2025-10-21 01:14:39,429 | INFO     | .. there are 14 such processes running
[2025-10-20 18:14:39] 2025-10-21 01:14:39,429 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 18:14:39] 2025-10-21 01:14:39,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 18:14:39] 2025-10-21 01:14:39,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 18:14:39] 2025-10-21 01:14:39,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 18:14:39] 2025-10-21 01:14:39,430 | CRITICAL | thread 'MainThread' is not alive
[2025-10-20 18:14:39] 2025-10-21 01:14:39,430 | INFO     | [monitor] control thread has ended
[2025-10-20 18:14:39] 2025-10-21 01:14:39,580 [wrapper] ==== pilot stdout END ====
[2025-10-20 18:14:39] 2025-10-21 01:14:39,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 18:14:39] 2025-10-21 01:14:39,585 [wrapper] pilotpid: 1440578
[2025-10-20 18:14:39] 2025-10-21 01:14:39,587 [wrapper] Pilot exit status: 0
[2025-10-20 18:14:39] 2025-10-21 01:14:39,597 [wrapper] pandaids: 6852953647
[2025-10-20 18:14:39] 2025-10-21 01:14:39,634 [wrapper] cleanup supervisor_pilot 1440584 1440579
[2025-10-20 18:14:39] 2025-10-21 01:14:39,636 [wrapper] Test setup, not cleaning
[2025-10-20 18:14:39] 2025-10-21 01:14:39,640 [wrapper] apfmon messages muted
[2025-10-20 18:14:39] 2025-10-21 01:14:39,642 [wrapper] ==== wrapper stdout END ====
[2025-10-20 18:14:39] 2025-10-21 01:14:39,644 [wrapper] ==== wrapper stderr END ====
[2025-10-20 18:14:39]  *** Error codes and diagnostics ***
[2025-10-20 18:14:39]     "exeErrorCode": 65,
[2025-10-20 18:14:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-20 18:14:39]     "pilotErrorCode": 1305,
[2025-10-20 18:14:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-20 18:14:39]  *** Listing of results directory ***
[2025-10-20 18:14:39] total 226488
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc    557409 Oct 20 16:48 pilot3.tar.gz
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc      5112 Oct 20 16:57 queuedata.json
[2025-10-20 18:14:39] -rwx------. 1 boinc boinc     36292 Oct 20 17:03 runpilot2-wrapper.sh
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc       100 Oct 20 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 18:14:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 20 18:11 run_atlas
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc       105 Oct 20 18:11 job.xml
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc      6594 Oct 20 18:11 init_data.xml
[2025-10-20 18:14:39] -rw-r--r--. 2 boinc boinc 227818875 Oct 20 18:11 EVNT.46771634._002210.pool.root.1
[2025-10-20 18:14:39] -rw-r--r--. 2 boinc boinc    569678 Oct 20 18:11 input.tar.gz
[2025-10-20 18:14:39] -rw-r--r--. 2 boinc boinc     15120 Oct 20 18:11 start_atlas.sh
[2025-10-20 18:14:39] drwxrwx--x. 2 boinc boinc      4096 Oct 20 18:11 shared
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc         0 Oct 20 18:11 boinc_lockfile
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc      2560 Oct 20 18:11 pandaJob.out
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc    978838 Oct 20 18:11 agis_schedconf.cvmfs.json
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc   1560740 Oct 20 18:11 agis_ddmendpoints.agis.ALL.json
[2025-10-20 18:14:39] drwx------. 5 boinc boinc      4096 Oct 20 18:11 pilot3
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc       523 Oct 20 18:11 boinc_task_state.xml
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc       971 Oct 20 18:11 memory_monitor_summary.json
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc     20910 Oct 20 18:11 log.46771637._056369.job.log.tgz.1
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc      8400 Oct 20 18:14 heartbeat.json
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc        22 Oct 20 18:14 wrapper_checkpoint.txt
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc      8192 Oct 20 18:14 boinc_mmap_file
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc       893 Oct 20 18:14 pilotlog.txt
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc        95 Oct 20 18:14 pilot_heartbeat.json
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc     82918 Oct 20 18:14 log.46771637._056369.job.log.1
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc       188 Oct 20 18:14 output.list
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc       620 Oct 20 18:14 runtime_log
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc    122880 Oct 20 18:14 result.tar.gz
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc       645 Oct 20 18:14 uLyKDmL1EV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPJ0NDmJjuj5m.diag
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc      8528 Oct 20 18:14 runtime_log.err
[2025-10-20 18:14:39] -rw-r--r--. 1 boinc boinc     21613 Oct 20 18:14 stderr.txt
[2025-10-20 18:14:39] No HITS result produced
[2025-10-20 18:14:39]  *** Contents of shared directory: ***
[2025-10-20 18:14:39] total 223176
[2025-10-20 18:14:39] -rw-r--r--. 2 boinc boinc 227818875 Oct 20 18:11 ATLAS.root_0
[2025-10-20 18:14:39] -rw-r--r--. 2 boinc boinc    569678 Oct 20 18:11 input.tar.gz
[2025-10-20 18:14:39] -rw-r--r--. 2 boinc boinc     15120 Oct 20 18:11 start_atlas.sh
[2025-10-20 18:14:39] -rw-------. 1 boinc boinc    122880 Oct 20 18:14 result.tar.gz
18:14:41 (1436938): run_atlas exited; CPU time 21.586245
18:14:41 (1436938): called boinc_finish(0)

</stderr_txt>
]]>

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