Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:19:36 (4037551): wrapper (7.7.26015): starting
05:19:36 (4037551): wrapper: running run_atlas (--nthreads 2)
[2025-10-21 05:19:36] Arguments: --nthreads 2
[2025-10-21 05:19:36] Threads: 2
[2025-10-21 05:19:36] Checking for CVMFS
[2025-10-21 05:19:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 05:19:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 05:19:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 05:19:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 05:19:37] 2.9.2.0 4008214 136 49868 151945 3 56 28674010 36864001 0 130560 0 76879 99.963 9387 2025 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 05:19:37] CVMFS is ok
[2025-10-21 05:19:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 05:19:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 05:19:37] Further information can be found at the LHC@home message board.
[2025-10-21 05:19:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 05:19:37] Checking for apptainer binary...
[2025-10-21 05:19:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 05:19:37] Running /usr/bin/apptainer --version
[2025-10-21 05:19:37] apptainer version 1.4.1-1.1
[2025-10-21 05:19:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 05:19:37] madmaxA275
[2025-10-21 05:19:37] apptainer works
[2025-10-21 05:19:37] Set ATHENA_PROC_NUMBER=2
[2025-10-21 05:19:37] Set ATHENA_CORE_NUMBER=2
[2025-10-21 05:19:37] Starting ATLAS job with PandaID=6852947708
[2025-10-21 05:19:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 07:40:08]  *** The last 200 lines of the pilot log: ***
[2025-10-21 07:40:08] 2025-10-21 05:39:26,173 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 07:40:08] 2025-10-21 05:39:26,173 | INFO     | update_server=False
[2025-10-21 07:40:08] 2025-10-21 05:39:26,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 07:40:08] 2025-10-21 05:39:26,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 07:40:08] 2025-10-21 05:39:26,173 | INFO     | aborting loop
[2025-10-21 07:40:08] 2025-10-21 05:39:26,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 07:40:08] 2025-10-21 05:39:26,572 | INFO     | all job control threads have been joined
[2025-10-21 07:40:08] 2025-10-21 05:39:26,798 | INFO     | all data control threads have been joined
[2025-10-21 07:40:08] 2025-10-21 05:39:26,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 07:40:08] 2025-10-21 05:39:27,179 | INFO     | [job] retrieve thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:27,179 | INFO     | [job] job monitor thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:27,179 | INFO     | [job] queue monitor thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:27,332 | INFO     | [payload] validate_post thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:27,409 | INFO     | all payload control threads have been joined
[2025-10-21 07:40:08] 2025-10-21 05:39:27,463 | INFO     | [payload] failed_post thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:27,573 | INFO     | [job] control thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:27,804 | INFO     | [data] control thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,006 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,121 | INFO     | [data] copytool_in thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,415 | INFO     | [payload] control thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,480 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,524 | INFO     | [job] validate thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,579 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:28,828 | INFO     | [data] copytool_out thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:29,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 07:40:08] 2025-10-21 05:39:33,681 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 07:40:08] 2025-10-21 05:39:55,876 | INFO     | PID=4041258 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 07:40:08] 2025-10-21 05:39:55,877 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 07:40:08] 2025-10-21 05:39:55,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 07:40:08] 2025-10-21 05:39:55,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 07:40:08] 2025-10-21 05:40:01,762 | INFO     | [monitor] cgroup control has ended
[2025-10-21 07:40:08] 2025-10-21 05:40:03,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802182178624)>', '<ExcThread(monitor, started 139801160304384)>']
[2025-10-21 07:40:08] 2025-10-21 05:40:03,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 07:40:08] 2025-10-21 05:40:03,915 | INFO     | [monitor] control thread has ended
[2025-10-21 07:40:08] 2025-10-21 05:40:08,588 | INFO     | all workflow threads have been joined
[2025-10-21 07:40:08] 2025-10-21 05:40:08,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 07:40:08] 2025-10-21 05:40:08,589 | INFO     | traces error code: 0
[2025-10-21 07:40:08] 2025-10-21 05:40:08,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 07:40:08] 2025-10-21 05:40:08,631 [wrapper] ==== pilot stdout END ====
[2025-10-21 07:40:08] 2025-10-21 05:40:08,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 07:40:08] 2025-10-21 05:40:08,636 [wrapper] pilotpid: 4041258
[2025-10-21 07:40:08] 2025-10-21 05:40:08,639 [wrapper] Pilot exit status: 0
[2025-10-21 07:40:08] 2025-10-21 05:40:08,644 [wrapper] pandaids: 6852947708
[2025-10-21 07:40:08] 2025-10-21 05:40:08,657 [wrapper] cleanup supervisor_pilot 4064554 4041259
[2025-10-21 07:40:08] 2025-10-21 05:40:08,659 [wrapper] Test setup, not cleaning
[2025-10-21 07:40:08] 2025-10-21 05:40:08,661 [wrapper] apfmon messages muted
[2025-10-21 07:40:08] 2025-10-21 05:40:08,663 [wrapper] ==== wrapper stdout END ====
[2025-10-21 07:40:08] 2025-10-21 05:40:08,665 [wrapper] ==== wrapper stderr END ====
[2025-10-21 07:40:08]  *** Error codes and diagnostics ***
[2025-10-21 07:40:08]     "exeErrorCode": 0,
[2025-10-21 07:40:08]     "exeErrorDiag": "",
[2025-10-21 07:40:08]     "pilotErrorCode": 0,
[2025-10-21 07:40:08]     "pilotErrorDiag": "",
[2025-10-21 07:40:08]  *** Listing of results directory ***
[2025-10-21 07:40:08] total 438176
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc    557409 Oct 20 23:57 pilot3.tar.gz
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc      5112 Oct 21 00:28 queuedata.json
[2025-10-21 07:40:08] -rwx------ 1 boinc boinc     36292 Oct 21 00:33 runpilot2-wrapper.sh
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc       100 Oct 21 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 07:40:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 05:19 run_atlas
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc       105 Oct 21 05:19 job.xml
[2025-10-21 07:40:08] -rw-r--r-- 2 boinc boinc 229823874 Oct 21 05:19 EVNT.46771634._002136.pool.root.1
[2025-10-21 07:40:08] -rw-r--r-- 2 boinc boinc    569681 Oct 21 05:19 input.tar.gz
[2025-10-21 07:40:08] -rw-r--r-- 2 boinc boinc     15120 Oct 21 05:19 start_atlas.sh
[2025-10-21 07:40:08] drwxrwx--x 2 boinc boinc      4096 Oct 21 05:19 shared
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc         0 Oct 21 05:19 boinc_setup_complete
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc      6208 Oct 21 05:19 init_data.xml
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc         0 Oct 21 05:19 boinc_lockfile
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc      2560 Oct 21 05:19 pandaJob.out
[2025-10-21 07:40:08] -rw------- 1 boinc boinc    978830 Oct 21 05:19 agis_schedconf.cvmfs.json
[2025-10-21 07:40:08] -rw------- 1 boinc boinc   1560740 Oct 21 05:19 agis_ddmendpoints.agis.ALL.json
[2025-10-21 07:40:08] drwx------ 5 boinc boinc      4096 Oct 21 05:19 pilot3
[2025-10-21 07:40:08] -rw------- 1 boinc boinc 212008518 Oct 21 07:38 HITS.46771637._053893.pool.root.1
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc       530 Oct 21 07:38 boinc_task_state.xml
[2025-10-21 07:40:08] -rw------- 1 boinc boinc      1016 Oct 21 07:39 memory_monitor_summary.json
[2025-10-21 07:40:08] -rw------- 1 boinc boinc    284145 Oct 21 07:39 log.46771637._053893.job.log.tgz.1
[2025-10-21 07:40:08] -rw------- 1 boinc boinc      7763 Oct 21 07:39 heartbeat.json
[2025-10-21 07:40:08] -rw------- 1 boinc boinc        95 Oct 21 07:39 pilot_heartbeat.json
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc      8192 Oct 21 07:39 boinc_mmap_file
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc        27 Oct 21 07:39 wrapper_checkpoint.txt
[2025-10-21 07:40:08] -rw------- 1 boinc boinc      4752 Oct 21 07:40 pilotlog.txt
[2025-10-21 07:40:08] -rw------- 1 boinc boinc   1199379 Oct 21 07:40 log.46771637._053893.job.log.1
[2025-10-21 07:40:08] -rw------- 1 boinc boinc       357 Oct 21 07:40 output.list
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc       620 Oct 21 07:40 runtime_log
[2025-10-21 07:40:08] -rw------- 1 boinc boinc   1505280 Oct 21 07:40 result.tar.gz
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc      8797 Oct 21 07:40 runtime_log.err
[2025-10-21 07:40:08] -rw------- 1 boinc boinc       663 Oct 21 07:40 07ONDmTcDV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmR5dMDmxJaEXo.diag
[2025-10-21 07:40:08] -rw-r--r-- 1 boinc boinc      7517 Oct 21 07:40 stderr.txt
[2025-10-21 07:40:08] HITS file was successfully produced:
[2025-10-21 07:40:08] -rw------- 1 boinc boinc 212008518 Oct 21 07:38 shared/HITS.pool.root.1
[2025-10-21 07:40:08]  *** Contents of shared directory: ***
[2025-10-21 07:40:08] total 433536
[2025-10-21 07:40:08] -rw-r--r-- 2 boinc boinc 229823874 Oct 21 05:19 ATLAS.root_0
[2025-10-21 07:40:08] -rw-r--r-- 2 boinc boinc    569681 Oct 21 05:19 input.tar.gz
[2025-10-21 07:40:08] -rw-r--r-- 2 boinc boinc     15120 Oct 21 05:19 start_atlas.sh
[2025-10-21 07:40:08] -rw------- 1 boinc boinc 212008518 Oct 21 07:38 HITS.pool.root.1
[2025-10-21 07:40:08] -rw------- 1 boinc boinc   1505280 Oct 21 07:40 result.tar.gz
07:40:09 (4037551): run_atlas exited; CPU time 16326.941462
07:40:09 (4037551): called boinc_finish(0)

</stderr_txt>
]]>

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