Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:14 (458863): wrapper (7.7.26015): starting
00:04:14 (458863): wrapper: running run_atlas (--nthreads 9)
[2025-10-21 00:04:15] Arguments: --nthreads 9
[2025-10-21 00:04:15] Threads: 9
[2025-10-21 00:04:15] Checking for CVMFS
[2025-10-21 00:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:04:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:04:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:04:18] 2.13.2.0 3821245 141718 329108 151945 1 491 13679659 21042177 18464 16776704 0 128006679 99.444 185530989 30272 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 00:04:18] CVMFS is ok
[2025-10-21 00:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:04:18] Further information can be found at the LHC@home message board.
[2025-10-21 00:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:04:18] Checking for apptainer binary...
[2025-10-21 00:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:04:18] Running /usr/bin/apptainer --version
[2025-10-21 00:04:18] apptainer version 1.4.2-1.el9
[2025-10-21 00:04:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:04:20] c-6-1.aglt2.org
[2025-10-21 00:04:20] apptainer works
[2025-10-21 00:04:20] Set ATHENA_PROC_NUMBER=9
[2025-10-21 00:04:20] Set ATHENA_CORE_NUMBER=9
[2025-10-21 00:04:20] Starting ATLAS job with PandaID=6852952650
[2025-10-21 00:04:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 10:39:39]  *** The last 200 lines of the pilot log: ***
[2025-10-21 10:39:39] 2025-10-21 14:38:43,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 10:39:39] 2025-10-21 14:38:43,482 | INFO     | fitting pss+swap vs Time
[2025-10-21 10:39:39] 2025-10-21 14:38:43,483 | INFO     | sum of square deviations: 73196615223.87683
[2025-10-21 10:39:39] 2025-10-21 14:38:43,502 | INFO     | sum of deviations: 806007177257.3169
[2025-10-21 10:39:39] 2025-10-21 14:38:43,503 | INFO     | mean x: 1761038634.7152104
[2025-10-21 10:39:39] 2025-10-21 14:38:43,503 | INFO     | mean y: 2347154.9449838186
[2025-10-21 10:39:39] 2025-10-21 14:38:43,503 | INFO     | -- intersect: -19389393496.812267
[2025-10-21 10:39:39] 2025-10-21 14:38:43,503 | INFO     | intersect: -19389393496.812267
[2025-10-21 10:39:39] 2025-10-21 14:38:43,516 | INFO     | chi2: 7.765072164455858
[2025-10-21 10:39:39] 2025-10-21 14:38:43,518 | INFO     | sum of square deviations: 71434642689.26927
[2025-10-21 10:39:39] 2025-10-21 14:38:43,545 | INFO     | sum of deviations: 836275289746.846
[2025-10-21 10:39:39] 2025-10-21 14:38:43,545 | INFO     | mean x: 1761038482.2202284
[2025-10-21 10:39:39] 2025-10-21 14:38:43,545 | INFO     | mean y: 2349752.96411093
[2025-10-21 10:39:39] 2025-10-21 14:38:43,545 | INFO     | -- intersect: -20613879453.643154
[2025-10-21 10:39:39] 2025-10-21 14:38:43,546 | INFO     | intersect: -20613879453.643154
[2025-10-21 10:39:39] 2025-10-21 14:38:43,547 | INFO     | chi2: 7.067590004293992
[2025-10-21 10:39:39] 2025-10-21 14:38:43,547 | INFO     | current chi2=7.067590004293992 (change=8.982301070613971 %)
[2025-10-21 10:39:39] 2025-10-21 14:38:43,547 | INFO     | right removable region: 612
[2025-10-21 10:39:39] 2025-10-21 14:38:43,552 | INFO     | sum of square deviations: 71434297308.93283
[2025-10-21 10:39:39] 2025-10-21 14:38:43,579 | INFO     | sum of deviations: 617294309376.5328
[2025-10-21 10:39:39] 2025-10-21 14:38:43,580 | INFO     | mean x: 1761038787.2251225
[2025-10-21 10:39:39] 2025-10-21 14:38:43,580 | INFO     | mean y: 2363478.8874388253
[2025-10-21 10:39:39] 2025-10-21 14:38:43,580 | INFO     | -- intersect: -15215525726.967184
[2025-10-21 10:39:39] 2025-10-21 14:38:43,580 | INFO     | intersect: -15215525726.967184
[2025-10-21 10:39:39] 2025-10-21 14:38:43,581 | INFO     | chi2: 4.010843511755271
[2025-10-21 10:39:39] 2025-10-21 14:38:43,582 | INFO     | current chi2=4.010843511755271 (change=48.34763377841275 %)
[2025-10-21 10:39:39] 2025-10-21 14:38:43,583 | INFO     | sum of square deviations: 69700491556.36687
[2025-10-21 10:39:39] 2025-10-21 14:38:43,705 | INFO     | sum of deviations: 488990595410.239
[2025-10-21 10:39:39] 2025-10-21 14:38:43,706 | INFO     | mean x: 1761038939.7351973
[2025-10-21 10:39:39] 2025-10-21 14:38:43,706 | INFO     | mean y: 2374756.554276316
[2025-10-21 10:39:39] 2025-10-21 14:38:43,706 | INFO     | -- intersect: -12352365654.212154
[2025-10-21 10:39:39] 2025-10-21 14:38:43,706 | INFO     | intersect: -12352365654.212154
[2025-10-21 10:39:39] 2025-10-21 14:38:43,711 | INFO     | chi2: 2.3793989296107503
[2025-10-21 10:39:39] 2025-10-21 14:38:43,711 | INFO     | current chi2=2.3793989296107503 (change=40.67584729653413 %)
[2025-10-21 10:39:39] 2025-10-21 14:38:43,712 | INFO     | sum of square deviations: 67995113271.61207
[2025-10-21 10:39:39] 2025-10-21 14:38:43,739 | INFO     | sum of deviations: 420147579020.71576
[2025-10-21 10:39:39] 2025-10-21 14:38:43,740 | INFO     | mean x: 1761039092.238806
[2025-10-21 10:39:39] 2025-10-21 14:38:43,740 | INFO     | mean y: 2380912.9950248757
[2025-10-21 10:39:39] 2025-10-21 14:38:43,740 | INFO     | -- intersect: -10879229184.621794
[2025-10-21 10:39:39] 2025-10-21 14:38:43,740 | INFO     | intersect: -10879229184.621794
[2025-10-21 10:39:39] 2025-10-21 14:38:43,741 | INFO     | chi2: 1.9889432478310085
[2025-10-21 10:39:39] 2025-10-21 14:38:43,741 | INFO     | current chi2=1.9889432478310085 (change=16.409845231107045 %)
[2025-10-21 10:39:39] 2025-10-21 14:38:43,741 | INFO     | left removable region: 30
[2025-10-21 10:39:39] 2025-10-21 14:38:43,753 | INFO     | sum of square deviations: 61136168972.32311
[2025-10-21 10:39:39] 2025-10-21 14:38:43,796 | INFO     | sum of deviations: 336775792626.39545
[2025-10-21 10:39:39] 2025-10-21 14:38:43,796 | INFO     | mean x: 1761039366.7594502
[2025-10-21 10:39:39] 2025-10-21 14:38:43,796 | INFO     | mean y: 2394540.609965636
[2025-10-21 10:39:39] 2025-10-21 14:38:43,796 | INFO     | -- intersect: -9698498376.890144
[2025-10-21 10:39:39] 2025-10-21 14:38:43,796 | INFO     | intersect: -9698498376.890144
[2025-10-21 10:39:39] 2025-10-21 14:38:43,797 | INFO     | chi2: 0.9336913541666327
[2025-10-21 10:39:39] 2025-10-21 14:38:43,797 | INFO     | -- intersect: -9698498376.890144
[2025-10-21 10:39:39] 2025-10-21 14:38:43,798 | INFO     | current memory leak: 5.51 B/s (using 582 data points, chi2=0.93)
[2025-10-21 10:39:39] 2025-10-21 14:38:43,815 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2025-10-21 10:39:39] 2025-10-21 14:38:43,815 | INFO     | ..............................
[2025-10-21 10:39:39] 2025-10-21 14:38:43,815 | INFO     | . Timing measurements:
[2025-10-21 10:39:39] 2025-10-21 14:38:43,815 | INFO     | . get job = 0 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,815 | INFO     | . initial setup = 10 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,815 | INFO     | . payload setup = 71 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,816 | INFO     | . stage-in = 0 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,816 | INFO     | . payload execution = 37734 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,816 | INFO     | . stage-out = 6 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,816 | INFO     | . log creation = 0 s
[2025-10-21 10:39:39] 2025-10-21 14:38:43,816 | INFO     | ..............................
[2025-10-21 10:39:39] 2025-10-21 14:38:44,408 | INFO     | PID=469325 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 10:39:39] 2025-10-21 14:38:44,413 | INFO     | .. there are 25 such processes running
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | 
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | job summary report
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | --------------------------------------------------
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | PanDA job id: 6852952650
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | task id: 46771637
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | errors: (none)
[2025-10-21 10:39:39] 2025-10-21 14:38:44,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | pilot state: finished 
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | transexitcode: 0
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | exeerrorcode: 0
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | exeerrordiag: 
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | exitcode: 0
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | exitmsg: OK
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | cpuconsumptiontime: 57162 s
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | nevents: 400
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | neventsw: 0
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | pid: 496635
[2025-10-21 10:39:39] 2025-10-21 14:38:44,433 | INFO     | pgrp: 496635
[2025-10-21 10:39:39] 2025-10-21 14:38:44,434 | INFO     | corecount: 9
[2025-10-21 10:39:39] 2025-10-21 14:38:44,434 | INFO     | event service: False
[2025-10-21 10:39:39] 2025-10-21 14:38:44,434 | INFO     | sizes: {0: 2348101, 1: 2348702, 2: 2348786, 4: 2348842, 5: 2349013, 6: 2349069, 7: 2349225, 18: 2349253, 30: 2349281, 42: 2349309, 53: 2349567, 54: 2349935, 64: 23
[2025-10-21 10:39:39] 2025-10-21 14:38:44,434 | INFO     | --------------------------------------------------
[2025-10-21 10:39:39] 2025-10-21 14:38:44,434 | INFO     | 
[2025-10-21 10:39:39] 2025-10-21 14:38:44,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 10:39:39] 2025-10-21 14:38:44,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 10:39:39] 2025-10-21 14:38:44,497 | INFO     | job 6852952650 has completed (purged errors)
[2025-10-21 10:39:39] 2025-10-21 14:38:44,498 | INFO     | overall cleanup function is called
[2025-10-21 10:39:39] 2025-10-21 14:38:45,507 | INFO     | --- collectZombieJob: --- 10, [496635]
[2025-10-21 10:39:39] 2025-10-21 14:38:45,507 | INFO     | zombie collector waiting for pid 496635
[2025-10-21 10:39:39] 2025-10-21 14:38:45,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 10:39:39] 2025-10-21 14:38:45,507 | INFO     | collected zombie processes
[2025-10-21 10:39:39] 2025-10-21 14:38:45,507 | INFO     | will attempt to kill all subprocesses of pid=496635
[2025-10-21 10:39:39] 2025-10-21 14:38:46,287 | INFO     | process IDs to be killed: [496635] (in reverse order)
[2025-10-21 10:39:39] 2025-10-21 14:38:46,402 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 10:39:39] 2025-10-21 14:38:46,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 10:39:39] 2025-10-21 14:38:46,424 | INFO     | did not find any defunct processes belonging to 496635
[2025-10-21 10:39:39] 2025-10-21 14:38:46,440 | INFO     | did not find any defunct processes belonging to 496635
[2025-10-21 10:39:39] 2025-10-21 14:38:46,440 | INFO     | ready for new job
[2025-10-21 10:39:39] 2025-10-21 14:38:46,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 10:39:39] 2025-10-21 14:38:46,452 | INFO     | ***************************************
[2025-10-21 10:39:39] 2025-10-21 14:38:46,452 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 10:39:39] 2025-10-21 14:38:46,452 | INFO     | ***************************************
[2025-10-21 10:39:39] 2025-10-21 14:38:46,453 | INFO     | 
[2025-10-21 10:39:39] 2025-10-21 14:38:46,467 | INFO     | architecture information:
[2025-10-21 10:39:39] 2025-10-21 14:38:46,472 | INFO     | executing command: cat /etc/os-release
[2025-10-21 10:39:39] 2025-10-21 14:38:46,516 | INFO     | cat /etc/os-release:
[2025-10-21 10:39:39] NAME="CentOS Linux"
[2025-10-21 10:39:39] VERSION="7 (Core)"
[2025-10-21 10:39:39] ID="centos"
[2025-10-21 10:39:39] ID_LIKE="rhel fedora"
[2025-10-21 10:39:39] VERSION_ID="7"
[2025-10-21 10:39:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 10:39:39] ANSI_COLOR="0;31"
[2025-10-21 10:39:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 10:39:39] HOME_URL="https://www.centos.org/"
[2025-10-21 10:39:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 10:39:39] 
[2025-10-21 10:39:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 10:39:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 10:39:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 10:39:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 10:39:39] 
[2025-10-21 10:39:39] 2025-10-21 14:38:46,517 | INFO     | ***************************************
[2025-10-21 10:39:39] 2025-10-21 14:38:47,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 10:39:39] 2025-10-21 14:38:47,070 | INFO     | sufficient remaining disk space (52404682752 B)
[2025-10-21 10:39:39] 2025-10-21 14:38:47,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 10:39:39] 2025-10-21 14:38:47,071 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 10:39:39] 2025-10-21 14:38:47,071 | INFO     | update_server=False
[2025-10-21 10:39:39] 2025-10-21 14:38:47,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 10:39:39] 2025-10-21 14:38:47,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 10:39:39] 2025-10-21 14:38:47,453 | INFO     | all job control threads have been joined
[2025-10-21 10:39:39] 2025-10-21 14:38:47,516 | INFO     | all data control threads have been joined
[2025-10-21 10:39:39] 2025-10-21 14:38:47,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 10:39:39] 2025-10-21 14:38:47,822 | INFO     | aborting loop
[2025-10-21 10:39:39] 2025-10-21 14:38:48,077 | INFO     | [job] retrieve thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:48,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 10:39:39] 2025-10-21 14:38:48,325 | INFO     | [payload] failed_post thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:48,459 | INFO     | [job] control thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:48,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:48,579 | INFO     | all payload control threads have been joined
[2025-10-21 10:39:39] 2025-10-21 14:38:48,588 | INFO     | [data] control thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:48,828 | INFO     | [job] job monitor thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,016 | INFO     | [payload] validate_post thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 10:39:39] 2025-10-21 14:38:49,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,253 | INFO     | [job] validate thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,442 | INFO     | [data] copytool_in thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,462 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,472 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:49,585 | INFO     | [payload] control thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:50,163 | INFO     | [data] copytool_out thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:50,176 | INFO     | [job] queue monitor thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:38:51,221 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 10:39:39] 2025-10-21 14:39:20,299 | INFO     | PID=469325 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 10:39:39] 2025-10-21 14:39:20,300 | INFO     | .. there are 25 such processes running
[2025-10-21 10:39:39] 2025-10-21 14:39:20,300 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 10:39:39] 2025-10-21 14:39:20,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 10:39:39] 2025-10-21 14:39:20,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 10:39:39] 2025-10-21 14:39:30,772 | INFO     | [monitor] cgroup control has ended
[2025-10-21 10:39:39] 2025-10-21 14:39:32,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022130767680)>', '<ExcThread(monitor, started 140021327701760)>']
[2025-10-21 10:39:39] 2025-10-21 14:39:33,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 10:39:39] 2025-10-21 14:39:33,391 | INFO     | [monitor] control thread has ended
[2025-10-21 10:39:39] 2025-10-21 14:39:37,721 | INFO     | all workflow threads have been joined
[2025-10-21 10:39:39] 2025-10-21 14:39:37,721 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 10:39:39] 2025-10-21 14:39:37,721 | INFO     | traces error code: 0
[2025-10-21 10:39:39] 2025-10-21 14:39:37,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 10:39:39] 2025-10-21 14:39:37,984 [wrapper] ==== pilot stdout END ====
[2025-10-21 10:39:39] 2025-10-21 14:39:37,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 10:39:39] 2025-10-21 14:39:37,992 [wrapper] pilotpid: 469325
[2025-10-21 10:39:39] 2025-10-21 14:39:37,995 [wrapper] Pilot exit status: 0
[2025-10-21 10:39:39] 2025-10-21 14:39:38,038 [wrapper] pandaids: 6852952650
[2025-10-21 10:39:39] 2025-10-21 14:39:38,205 [wrapper] cleanup supervisor_pilot 2069425 469326
[2025-10-21 10:39:39] 2025-10-21 14:39:38,242 [wrapper] Test setup, not cleaning
[2025-10-21 10:39:39] 2025-10-21 14:39:38,268 [wrapper] apfmon messages muted
[2025-10-21 10:39:39] 2025-10-21 14:39:38,353 [wrapper] ==== wrapper stdout END ====
[2025-10-21 10:39:39] 2025-10-21 14:39:38,372 [wrapper] ==== wrapper stderr END ====
[2025-10-21 10:39:39]  *** Error codes and diagnostics ***
[2025-10-21 10:39:39]     "exeErrorCode": 0,
[2025-10-21 10:39:39]     "exeErrorDiag": "",
[2025-10-21 10:39:39]     "pilotErrorCode": 0,
[2025-10-21 10:39:39]     "pilotErrorDiag": "",
[2025-10-21 10:39:39]  *** Listing of results directory ***
[2025-10-21 10:39:39] total 441764
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 19:45 queuedata.json
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 19:48 pilot3.tar.gz
[2025-10-21 10:39:39] -rwx------. 1 boincer umatlas     36292 Oct 20 19:48 runpilot2-wrapper.sh
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 10:39:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:04 run_atlas
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:04 job.xml
[2025-10-21 10:39:39] -rw-r--r--. 2 boincer umatlas 231244823 Oct 21 00:04 EVNT.46771634._002194.pool.root.1
[2025-10-21 10:39:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 00:04 shared
[2025-10-21 10:39:39] -rw-r--r--. 2 boincer umatlas    569673 Oct 21 00:04 input.tar.gz
[2025-10-21 10:39:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:04 boinc_lockfile
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas      2559 Oct 21 00:04 pandaJob.out
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas    978830 Oct 21 00:06 agis_schedconf.cvmfs.json
[2025-10-21 10:39:39] drwx------. 5 boincer umatlas      4096 Oct 21 00:06 pilot3
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas      6656 Oct 21 10:30 init_data.xml
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas 207342191 Oct 21 10:36 HITS.46771637._055961.pool.root.1
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas       531 Oct 21 10:36 boinc_task_state.xml
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas      1050 Oct 21 10:38 memory_monitor_summary.json
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas   1560740 Oct 21 10:38 agis_ddmendpoints.agis.ALL.json
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas    726300 Oct 21 10:38 log.46771637._055961.job.log.tgz.1
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas        95 Oct 21 10:38 pilot_heartbeat.json
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas      7830 Oct 21 10:38 heartbeat.json
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas        28 Oct 21 10:39 wrapper_checkpoint.txt
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas      4823 Oct 21 10:39 pilotlog.txt
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas   4208906 Oct 21 10:39 log.46771637._055961.job.log.1
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas       357 Oct 21 10:39 output.list
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas       620 Oct 21 10:39 runtime_log
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas   4956160 Oct 21 10:39 result.tar.gz
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas       658 Oct 21 10:39 Z8lLDmXnEV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyC0NDmANXOOm.diag
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas      8689 Oct 21 10:39 runtime_log.err
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 10:39 boinc_mmap_file
[2025-10-21 10:39:39] -rw-r--r--. 1 boincer umatlas     21137 Oct 21 10:39 stderr.txt
[2025-10-21 10:39:39] HITS file was successfully produced:
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas 207342191 Oct 21 10:36 shared/HITS.pool.root.1
[2025-10-21 10:39:39]  *** Contents of shared directory: ***
[2025-10-21 10:39:39] total 433736
[2025-10-21 10:39:39] -rw-r--r--. 2 boincer umatlas 231244823 Oct 21 00:04 ATLAS.root_0
[2025-10-21 10:39:39] -rw-r--r--. 2 boincer umatlas    569673 Oct 21 00:04 input.tar.gz
[2025-10-21 10:39:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas 207342191 Oct 21 10:36 HITS.pool.root.1
[2025-10-21 10:39:39] -rw-------. 1 boincer umatlas   4956160 Oct 21 10:39 result.tar.gz
10:39:41 (458863): run_atlas exited; CPU time 58209.975993
10:39:41 (458863): called boinc_finish(0)

</stderr_txt>
]]>

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