Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:41:35 (3508): wrapper (7.7.26015): starting
01:41:35 (3508): wrapper: running run_atlas (--nthreads 4)
[2025-10-21 01:41:35] Arguments: --nthreads 4
[2025-10-21 01:41:35] Threads: 4
[2025-10-21 01:41:35] Checking for CVMFS
[2025-10-21 01:42:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 01:42:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 01:42:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 01:42:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 01:42:18] 2.12.7.0 3730 0 25460 151940 3 1 3320937 4194304 0 130560 0 0 0.000 1291 56 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-21 01:42:18] CVMFS is ok
[2025-10-21 01:42:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 01:42:18] Checking for apptainer binary...
[2025-10-21 01:42:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 01:42:19] Running /usr/bin/apptainer --version
[2025-10-21 01:42:19] apptainer version 1.0.3
[2025-10-21 01:42:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 01:42:20] TeeC05
[2025-10-21 01:42:20] apptainer works
[2025-10-21 01:42:20] Set ATHENA_PROC_NUMBER=4
[2025-10-21 01:42:20] Set ATHENA_CORE_NUMBER=4
[2025-10-21 01:42:20] Starting ATLAS job with PandaID=6852950355
[2025-10-21 01:42:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 04:44:30]  *** The last 200 lines of the pilot log: ***
[2025-10-21 04:44:30] 2025-10-21 03:43:48,068 | INFO     | time since job start (10842s) is within the limit (172800.0s)
[2025-10-21 04:44:30] 2025-10-21 03:43:49,810 | INFO     | monitor loop #820: job 0:6852950355 is in state 'finished'
[2025-10-21 04:44:30] 2025-10-21 03:43:49,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,074 | INFO     | time since job start (10844s) is within the limit (172800.0s)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,862 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 04:44:30] 2025-10-21 03:43:50,863 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3090.69025
[2025-10-21 04:44:30] 2025-10-21 03:43:50,863 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6852950355/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,864 | INFO     | extracted standard info from prmon json
[2025-10-21 04:44:30] 2025-10-21 03:43:50,864 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 04:44:30] 2025-10-21 03:43:50,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 04:44:30] 2025-10-21 03:43:50,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 04:44:30] 2025-10-21 03:43:50,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 04:44:30] 2025-10-21 03:43:50,866 | INFO     | fitting pss+swap vs Time
[2025-10-21 04:44:30] 2025-10-21 03:43:50,866 | INFO     | sum of square deviations: 1719429448.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,867 | INFO     | sum of deviations: -21449011784.000004
[2025-10-21 04:44:30] 2025-10-21 03:43:50,867 | INFO     | mean x: 1761012777.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,867 | INFO     | mean y: 2408967.9943502825
[2025-10-21 04:44:30] 2025-10-21 03:43:50,867 | INFO     | -- intersect: 21970151726.839767
[2025-10-21 04:44:30] 2025-10-21 03:43:50,867 | INFO     | intersect: 21970151726.839767
[2025-10-21 04:44:30] 2025-10-21 03:43:50,867 | INFO     | chi2: 1.8189034293302657
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | sum of square deviations: 1577789583.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | sum of deviations: -20364861162.999992
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | mean x: 1761012624.5
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | mean y: 2410135.61627907
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | -- intersect: 22732169534.866123
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | intersect: 22732169534.866123
[2025-10-21 04:44:30] 2025-10-21 03:43:50,868 | INFO     | chi2: 1.8162446654328612
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | current chi2=1.8162446654328612 (change=0.14617399992387006 %)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | right removable region: 171
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | sum of square deviations: 1577789583.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | sum of deviations: -44812814055.999985
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | mean x: 1761012929.5
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | mean y: 2433714.3720930233
[2025-10-21 04:44:30] 2025-10-21 03:43:50,869 | INFO     | -- intersect: 50019207693.72934
[2025-10-21 04:44:30] 2025-10-21 03:43:50,870 | INFO     | intersect: 50019207693.72934
[2025-10-21 04:44:30] 2025-10-21 03:43:50,870 | INFO     | chi2: 0.33342383003117204
[2025-10-21 04:44:30] 2025-10-21 03:43:50,870 | INFO     | current chi2=0.33342383003117204 (change=81.66896468198198 %)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,870 | INFO     | sum of square deviations: 1444149868.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,870 | INFO     | sum of deviations: -37851549931.99999
[2025-10-21 04:44:30] 2025-10-21 03:43:50,870 | INFO     | mean x: 1761013082.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | mean y: 2425743.916167665
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | -- intersect: 46159044306.3244
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | intersect: 46159044306.3244
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | chi2: 0.31935332792285737
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | current chi2=0.31935332792285737 (change=4.2200049429578 %)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | left removable region: 20
[2025-10-21 04:44:30] 2025-10-21 03:43:50,871 | INFO     | sum of square deviations: 1067554900.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | sum of deviations: -19590269620.999996
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | mean x: 1761013204.0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | mean y: 2405560.913907285
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | -- intersect: 32318048974.195103
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | intersect: 32318048974.195103
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | chi2: 0.2310997407752299
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | -- intersect: 32318048974.195103
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | current memory leak: -18.35 B/s (using 151 data points, chi2=0.23)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | could have reported an average CPU frequency of 3024 MHz (9 samples)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | ..............................
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | . Timing measurements:
[2025-10-21 04:44:30] 2025-10-21 03:43:50,872 | INFO     | . get job = 0 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | . initial setup = 12 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | . payload setup = 6 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | . stage-in = 0 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | . payload execution = 10781 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | . stage-out = 6 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | . log creation = 0 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,873 | INFO     | ..............................
[2025-10-21 04:44:30] 2025-10-21 03:43:50,921 | INFO     | 
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | job summary report
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | --------------------------------------------------
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | PanDA job id: 6852950355
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | task id: 46771637
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | errors: (none)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | pilot state: finished 
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | transexitcode: 0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | exeerrorcode: 0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | exeerrordiag: 
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | exitcode: 0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | exitmsg: OK
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | cpuconsumptiontime: 41463 s
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | nevents: 400
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | neventsw: 0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | pid: 14274
[2025-10-21 04:44:30] 2025-10-21 03:43:50,922 | INFO     | pgrp: 14274
[2025-10-21 04:44:30] 2025-10-21 03:43:50,923 | INFO     | corecount: 4
[2025-10-21 04:44:30] 2025-10-21 03:43:50,923 | INFO     | event service: False
[2025-10-21 04:44:30] 2025-10-21 03:43:50,923 | INFO     | sizes: {0: 2348930, 3: 2349192, 11: 2349220, 10791: 2378189, 10799: 2387241, 10831: 2387443}
[2025-10-21 04:44:30] 2025-10-21 03:43:50,923 | INFO     | --------------------------------------------------
[2025-10-21 04:44:30] 2025-10-21 03:43:50,923 | INFO     | 
[2025-10-21 04:44:30] 2025-10-21 03:43:50,923 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-21 04:44:30] 2025-10-21 03:43:50,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | job 6852950355 has completed (purged errors)
[2025-10-21 04:44:30] 2025-10-21 03:43:50,936 | INFO     | overall cleanup function is called
[2025-10-21 04:44:30] 2025-10-21 03:43:51,943 | INFO     | --- collectZombieJob: --- 10, [14274]
[2025-10-21 04:44:30] 2025-10-21 03:43:51,944 | INFO     | zombie collector waiting for pid 14274
[2025-10-21 04:44:30] 2025-10-21 03:43:51,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 04:44:30] 2025-10-21 03:43:51,944 | INFO     | collected zombie processes
[2025-10-21 04:44:30] 2025-10-21 03:43:51,944 | INFO     | will attempt to kill all subprocesses of pid=14274
[2025-10-21 04:44:30] 2025-10-21 03:43:52,008 | INFO     | process IDs to be killed: [14274] (in reverse order)
[2025-10-21 04:44:30] 2025-10-21 03:43:52,037 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 04:44:30] 2025-10-21 03:43:52,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 04:44:30] 2025-10-21 03:43:52,040 | INFO     | did not find any defunct processes belonging to 14274
[2025-10-21 04:44:30] 2025-10-21 03:43:52,041 | INFO     | did not find any defunct processes belonging to 14274
[2025-10-21 04:44:30] 2025-10-21 03:43:52,042 | INFO     | ready for new job
[2025-10-21 04:44:30] 2025-10-21 03:43:52,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 04:44:30] 2025-10-21 03:43:52,043 | INFO     | ***************************************
[2025-10-21 04:44:30] 2025-10-21 03:43:52,043 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 04:44:30] 2025-10-21 03:43:52,043 | INFO     | ***************************************
[2025-10-21 04:44:30] 2025-10-21 03:43:52,043 | INFO     | 
[2025-10-21 04:44:30] 2025-10-21 03:43:52,064 | INFO     | architecture information:
[2025-10-21 04:44:30] 2025-10-21 03:43:52,064 | INFO     | executing command: cat /etc/os-release
[2025-10-21 04:44:30] 2025-10-21 03:43:52,072 | INFO     | cat /etc/os-release:
[2025-10-21 04:44:30] NAME="CentOS Linux"
[2025-10-21 04:44:30] VERSION="7 (Core)"
[2025-10-21 04:44:30] ID="centos"
[2025-10-21 04:44:30] ID_LIKE="rhel fedora"
[2025-10-21 04:44:30] VERSION_ID="7"
[2025-10-21 04:44:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 04:44:30] ANSI_COLOR="0;31"
[2025-10-21 04:44:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 04:44:30] HOME_URL="https://www.centos.org/"
[2025-10-21 04:44:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 04:44:30] 
[2025-10-21 04:44:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 04:44:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 04:44:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 04:44:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 04:44:30] 
[2025-10-21 04:44:30] 2025-10-21 03:43:52,072 | INFO     | ***************************************
[2025-10-21 04:44:30] 2025-10-21 03:43:52,576 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-21 04:44:30] 2025-10-21 03:43:52,589 | INFO     | sufficient remaining disk space (432474685440 B)
[2025-10-21 04:44:30] 2025-10-21 03:43:52,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 04:44:30] 2025-10-21 03:43:52,590 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 04:44:30] 2025-10-21 03:43:52,590 | INFO     | update_server=False
[2025-10-21 04:44:30] 2025-10-21 03:43:52,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 04:44:30] 2025-10-21 03:43:52,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 04:44:30] 2025-10-21 03:43:52,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 04:44:30] 2025-10-21 03:43:52,759 | INFO     | all data control threads have been joined
[2025-10-21 04:44:30] 2025-10-21 03:43:53,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 04:44:30] 2025-10-21 03:43:53,319 | INFO     | aborting loop
[2025-10-21 04:44:30] 2025-10-21 03:43:53,481 | INFO     | all payload control threads have been joined
[2025-10-21 04:44:30] 2025-10-21 03:43:53,596 | INFO     | [job] retrieve thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:53,596 | INFO     | [job] queue monitor thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:53,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:53,765 | INFO     | [data] control thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:53,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 04:44:30] 2025-10-21 03:43:54,164 | INFO     | all job control threads have been joined
[2025-10-21 04:44:30] 2025-10-21 03:43:54,201 | INFO     | [data] copytool_in thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,270 | INFO     | [payload] failed_post thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,325 | INFO     | [job] job monitor thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,336 | INFO     | [job] validate thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,487 | INFO     | [payload] control thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,715 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,783 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:54,952 | INFO     | [payload] validate_post thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:55,170 | INFO     | [job] control thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:56,022 | INFO     | [data] copytool_out thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:43:56,597 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 04:44:30] 2025-10-21 03:44:23,188 | INFO     | PID=7887 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-21 04:44:30] 2025-10-21 03:44:23,189 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 04:44:30] 2025-10-21 03:44:23,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 04:44:30] 2025-10-21 03:44:23,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 04:44:30] 2025-10-21 03:44:23,786 | INFO     | [monitor] cgroup control has ended
[2025-10-21 04:44:30] 2025-10-21 03:44:25,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329377875776)>', '<ExcThread(monitor, started 140328728262400)>']
[2025-10-21 04:44:30] 2025-10-21 03:44:25,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 04:44:30] 2025-10-21 03:44:25,200 | INFO     | [monitor] control thread has ended
[2025-10-21 04:44:30] 2025-10-21 03:44:30,151 | INFO     | all workflow threads have been joined
[2025-10-21 04:44:30] 2025-10-21 03:44:30,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 04:44:30] 2025-10-21 03:44:30,152 | INFO     | traces error code: 0
[2025-10-21 04:44:30] 2025-10-21 03:44:30,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 04:44:30] 2025-10-21 03:44:30,248 [wrapper] ==== pilot stdout END ====
[2025-10-21 04:44:30] 2025-10-21 03:44:30,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 04:44:30] 2025-10-21 03:44:30,252 [wrapper] pilotpid: 7887
[2025-10-21 04:44:30] 2025-10-21 03:44:30,254 [wrapper] Pilot exit status: 0
[2025-10-21 04:44:30] 2025-10-21 03:44:30,284 [wrapper] pandaids: 6852950355
[2025-10-21 04:44:30] 2025-10-21 03:44:30,301 [wrapper] cleanup supervisor_pilot   33658 7888
[2025-10-21 04:44:30] 2025-10-21 03:44:30,303 [wrapper] Test setup, not cleaning
[2025-10-21 04:44:30] 2025-10-21 03:44:30,305 [wrapper] apfmon messages muted
[2025-10-21 04:44:30] 2025-10-21 03:44:30,307 [wrapper] ==== wrapper stdout END ====
[2025-10-21 04:44:30] 2025-10-21 03:44:30,309 [wrapper] ==== wrapper stderr END ====
[2025-10-21 04:44:30]  *** Error codes and diagnostics ***
[2025-10-21 04:44:30]     "exeErrorCode": 0,
[2025-10-21 04:44:30]     "exeErrorDiag": "",
[2025-10-21 04:44:30]     "pilotErrorCode": 0,
[2025-10-21 04:44:30]     "pilotErrorDiag": "",
[2025-10-21 04:44:30]  *** Listing of results directory ***
[2025-10-21 04:44:30] total 434404
[2025-10-21 04:44:30] -rw-r--r-- 1 m m    557409 Oct 20 23:52 pilot3.tar.gz
[2025-10-21 04:44:30] -rw-r--r-- 1 m m      5112 Oct 21 00:42 queuedata.json
[2025-10-21 04:44:30] -rwx------ 1 m m     36292 Oct 21 00:43 runpilot2-wrapper.sh
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m       100 Oct 21 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 04:44:30] -rwxr-xr-x 1 m m      7986 Oct 21 01:41 run_atlas
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m       105 Oct 21 01:41 job.xml
[2025-10-21 04:44:30] -rw-r--r-- 2 m m     15120 Oct 21 01:41 start_atlas.sh
[2025-10-21 04:44:30] drwxrwx--x 2 m m      4096 Oct 21 01:41 shared
[2025-10-21 04:44:30] -rw-r--r-- 2 m m    569676 Oct 21 01:41 input.tar.gz
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m      5963 Oct 21 01:41 init_data.xml
[2025-10-21 04:44:30] -rw-r--r-- 2 m m 227703255 Oct 21 01:41 EVNT.46771634._002188.pool.root.1
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m         0 Oct 21 01:41 boinc_lockfile
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m      2560 Oct 21 01:42 pandaJob.out
[2025-10-21 04:44:30] -rw------- 1 m m    978838 Oct 21 01:42 agis_schedconf.cvmfs.json
[2025-10-21 04:44:30] drwx------ 5 m m      4096 Oct 21 01:43 pilot3
[2025-10-21 04:44:30] -rw------- 1 m m 209469385 Oct 21 04:42 HITS.46771637._055830.pool.root.1
[2025-10-21 04:44:30] -rw------- 1 m m      1015 Oct 21 04:43 memory_monitor_summary.json
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m       530 Oct 21 04:43 boinc_task_state.xml
[2025-10-21 04:44:30] -rw------- 1 m m   1560740 Oct 21 04:43 agis_ddmendpoints.agis.ALL.json
[2025-10-21 04:44:30] -rw------- 1 m m    357964 Oct 21 04:43 log.46771637._055830.job.log.tgz.1
[2025-10-21 04:44:30] -rw------- 1 m m      7775 Oct 21 04:43 heartbeat.json
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m      8192 Oct 21 04:44 boinc_mmap_file
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m        28 Oct 21 04:44 wrapper_checkpoint.txt
[2025-10-21 04:44:30] -rw------- 1 m m        95 Oct 21 04:44 pilot_heartbeat.json
[2025-10-21 04:44:30] -rw------- 1 m m      4745 Oct 21 04:44 pilotlog.txt
[2025-10-21 04:44:30] -rw------- 1 m m   1516360 Oct 21 04:44 log.46771637._055830.job.log.1
[2025-10-21 04:44:30] -rw------- 1 m m       357 Oct 21 04:44 output.list
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m       620 Oct 21 04:44 runtime_log
[2025-10-21 04:44:30] -rw------- 1 m m   1894400 Oct 21 04:44 result.tar.gz
[2025-10-21 04:44:30] -rw------- 1 m m       639 Oct 21 04:44 v6LKDmdiEV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrB0NDmTpsC0m.diag
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m      8618 Oct 21 04:44 runtime_log.err
[2025-10-21 04:44:30] -rw-rw-r-- 1 m m     20757 Oct 21 04:44 stderr.txt
[2025-10-21 04:44:30] HITS file was successfully produced:
[2025-10-21 04:44:30] -rw------- 1 m m 209469385 Oct 21 04:42 shared/HITS.pool.root.1
[2025-10-21 04:44:30]  *** Contents of shared directory: ***
[2025-10-21 04:44:30] total 429364
[2025-10-21 04:44:30] -rw-r--r-- 2 m m     15120 Oct 21 01:41 start_atlas.sh
[2025-10-21 04:44:30] -rw-r--r-- 2 m m    569676 Oct 21 01:41 input.tar.gz
[2025-10-21 04:44:30] -rw-r--r-- 2 m m 227703255 Oct 21 01:41 ATLAS.root_0
[2025-10-21 04:44:30] -rw------- 1 m m 209469385 Oct 21 04:42 HITS.pool.root.1
[2025-10-21 04:44:30] -rw------- 1 m m   1894400 Oct 21 04:44 result.tar.gz
04:44:31 (3508): run_atlas exited; CPU time 41561.871530
04:44:31 (3508): called boinc_finish(0)

</stderr_txt>
]]>

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