Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-20 23:49:22 (212697): vboxwrapper version 26210
2025-10-20 23:49:22 (212697): BOINC client version: 8.2.4
2025-10-20 23:49:22 (212697): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-20 23:49:22 (212697): Successfully copied 'init_data.xml' to the shared directory.
2025-10-20 23:49:22 (212697): Create VM. (boinc_809dc9dec5ba108e, slot#24)
2025-10-20 23:49:22 (212697): Setting Memory Size for VM. (4800MB)
2025-10-20 23:49:22 (212697): Setting CPU Count for VM. (8)
2025-10-20 23:49:22 (212697): Setting Chipset Options for VM.
2025-10-20 23:49:22 (212697): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-20 23:49:22 (212697): Setting Boot Options for VM.
2025-10-20 23:49:23 (212697): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-20 23:49:23 (212697): Enabling VM Network Access.
2025-10-20 23:49:23 (212697): Disabling USB Support for VM.
2025-10-20 23:49:23 (212697): Disabling COM Port Support for VM.
2025-10-20 23:49:23 (212697): Disabling LPT Port Support for VM.
2025-10-20 23:49:23 (212697): Disabling Audio Support for VM.
2025-10-20 23:49:23 (212697): Disabling Clipboard Support for VM.
2025-10-20 23:49:23 (212697): Disabling Drag and Drop Support for VM.
2025-10-20 23:49:23 (212697): Adding storage controller(s) to VM.
2025-10-20 23:49:23 (212697): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-20 23:49:23 (212697): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-20 23:49:23 (212697): forwarding host port 33659 to guest port 80
2025-10-20 23:49:23 (212697): Enabling remote desktop for VM.
2025-10-20 23:49:23 (212697): Required extension pack not installed, remote desktop not enabled.
2025-10-20 23:49:23 (212697): Enabling shared directory for VM.
2025-10-20 23:49:24 (212697): Starting VM using VBoxManage interface. (boinc_809dc9dec5ba108e, slot#24)
2025-10-20 23:49:25 (212697): Successfully started VM. (PID = '213212')
2025-10-20 23:49:25 (212697): Reporting VM Process ID to BOINC.
2025-10-20 23:49:25 (212697): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-20 23:49:25 (212697): Guest Log: CPUID EDX: 0x178bfbff
2025-10-20 23:49:25 (212697): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-20 23:49:25 (212697): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-20 23:49:25 (212697): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-20 23:49:25 (212697): Detected: Web Application Enabled (http://localhost:33659)
2025-10-20 23:49:25 (212697): Preference change detected
2025-10-20 23:49:25 (212697): Setting CPU throttle for VM. (50%)
2025-10-20 23:49:25 (212697): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-20 23:49:27 (212697): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-20 23:49:27 (212697): Guest Log: BIOS: Booting from Hard Disk...
2025-10-20 23:49:30 (212697): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-20 23:49:30 (212697): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-20 23:49:30 (212697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-20 23:49:37 (212697): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-20 23:49:37 (212697): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-20 23:49:42 (212697): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000104 main     Log opened 2025-10-21T03:49:40.509521000Z
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000173 main     OS Product: Linux
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000182 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000190 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000199 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000199 main     Process ID: 1360
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000199 main     Package type: LINUX_64BITS_GENERIC
2025-10-20 23:49:42 (212697): Guest Log: 00:00:00.000620 main     5.2.32 r132073 started. Verbose level = 0
2025-10-20 23:49:42 (212697): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-20 23:49:42 (212697): Guest Log: [INFO] Mounting shared directory
2025-10-20 23:49:42 (212697): Guest Log: [INFO] Checking for init_data.xml
2025-10-20 23:49:45 (212697): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-20 23:49:45 (212697): Guest Log: [INFO] Detected branch: prod
2025-10-20 23:49:45 (212697): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-20 23:49:45 (212697): Guest Log: Copying input files
2025-10-20 23:49:46 (212697): Guest Log: Copied input files into RunAtlas.
2025-10-20 23:49:46 (212697): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-20 23:49:46 (212697): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-20 23:49:46 (212697): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-20 23:49:46 (212697): Guest Log: Further information can be found at the LHC@home message board.
2025-10-20 23:49:54 (212697): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-20 23:49:54 (212697): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-20 23:49:54 (212697): Guest Log: 2.6.3.0 1637 0 32204 151945 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-20 23:49:55 (212697): Guest Log: copied the webapp to /var/www
2025-10-20 23:49:55 (212697): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-20 23:49:55 (212697): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-20 23:49:55 (212697): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-20 23:49:55 (212697): Guest Log:  *** Starting ATLAS job. (PandaID=6852940872 taskID=46771637) ***
2025-10-21 00:11:01 (212697): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 00:11:21 (212697): VM state change detected. (old = 'paused', new = 'running')
2025-10-21 00:55:57 (212697): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 00:56:17 (212697): VM state change detected. (old = 'paused', new = 'running')
2025-10-21 00:57:07 (212697): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 00:57:28 (212697): VM state change detected. (old = 'paused', new = 'running')
2025-10-21 00:58:46 (212697): Guest Log:  *** Job finished ***
2025-10-21 00:58:46 (212697): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:33,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:33,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:36,790 | INFO     | [monitor] cgroup control has ended
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:37,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554007701312)>', '<ExcThread(monitor, started 140553190627072)>']
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:38,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:38,061 | INFO     | [monitor] control thread has ended
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,217 | INFO     | all workflow threads have been joined
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,217 | INFO     | end of generic workflow (traces error code: 0)
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,217 | INFO     | traces error code: 0
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,327 [wrapper] ==== pilot stdout END ====
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,331 [wrapper] ==== wrapper stdout RESUME ====
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,336 [wrapper] pilotpid: 6067
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,339 [wrapper] Pilot exit status: 0
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,396 [wrapper] pandaids: 6852940872
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,424 [wrapper] cleanup supervisor_pilot 31654 6068
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,428 [wrapper] Test setup, not cleaning
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,431 [wrapper] apfmon messages muted
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,434 [wrapper] ==== wrapper stdout END ====
2025-10-21 00:58:46 (212697): Guest Log: 2025-10-21 04:57:42,438 [wrapper] ==== wrapper stderr END ====
2025-10-21 00:58:46 (212697): Guest Log:  *** Error codes and diagnostics ***
2025-10-21 00:58:46 (212697): Guest Log:     "exeErrorCode": 0,
2025-10-21 00:58:46 (212697): Guest Log:     "exeErrorDiag": "",
2025-10-21 00:58:46 (212697): Guest Log:     "pilotErrorCode": 0,
2025-10-21 00:58:46 (212697): Guest Log:     "pilotErrorDiag": "",
2025-10-21 00:58:46 (212697): Guest Log:  *** Listing of results directory ***
2025-10-21 00:58:46 (212697): Guest Log: total 205856
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 20 20:52 pilot3.tar.gz
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 20 21:28 queuedata.json
2025-10-21 00:58:46 (212697): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 20 21:31 runpilot2-wrapper.sh
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas    569690 Oct 21 03:49 input.tar.gz
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas      6499 Oct 21 03:49 init_data.xml
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 21 03:49 start_atlas.sh
2025-10-21 00:58:46 (212697): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 21 03:49 EVNT.46771634._002043.pool.root.1 -> /data/./ATLAS.root_0
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Oct 21 03:49 pandaJob.out
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas    978830 Oct 21 03:50 agis_schedconf.cvmfs.json
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 21 03:50 agis_ddmendpoints.agis.ALL.json
2025-10-21 00:58:46 (212697): Guest Log: drwx------. 5 atlas atlas      4096 Oct 21 03:50 pilot3
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas 205259874 Oct 21 04:56 HITS.46771637._050994.pool.root.1
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas      1029 Oct 21 04:56 memory_monitor_summary.json
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas    308380 Oct 21 04:56 log.46771637._050994.job.log.tgz.1
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas      7801 Oct 21 04:57 heartbeat.json
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas        95 Oct 21 04:57 pilot_heartbeat.json
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas      5063 Oct 21 04:57 pilotlog.txt
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas    542662 Oct 21 04:57 log.46771637._050994.job.log.1
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas       357 Oct 21 04:57 output.list
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 21 04:57 runtime_log
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas    870400 Oct 21 04:57 result.tar.gz
2025-10-21 00:58:46 (212697): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct 21 04:57 runtime_log.err
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas       655 Oct 21 04:57 5CdNDmleCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwpdMDmM8dnXo.diag
2025-10-21 00:58:46 (212697): Guest Log: Looking for outputfile HITS.46771637._050994.pool.root.1
2025-10-21 00:58:46 (212697): Guest Log: HITS file was successfully produced
2025-10-21 00:58:46 (212697): Guest Log: -rw-------. 1 atlas atlas 205259874 Oct 21 04:56 /home/atlas/RunAtlas/HITS.46771637._050994.pool.root.1
2025-10-21 00:58:47 (212697): Guest Log: Successfully finished the ATLAS job!
2025-10-21 00:58:47 (212697): Guest Log: Copying the results back to the shared directory!
2025-10-21 00:58:47 (212697): Guest Log:  *** Contents of shared directory: ***
2025-10-21 00:58:47 (212697): Guest Log: total 223512
2025-10-21 00:58:47 (212697): Guest Log: -rw-r--r--. 1 root root 227399442 Oct 21 03:49 ATLAS.root_0
2025-10-21 00:58:47 (212697): Guest Log: -rw-r--r--. 1 root root      6499 Oct 21 03:49 init_data.xml
2025-10-21 00:58:47 (212697): Guest Log: -rw-r--r--. 1 root root    569690 Oct 21 03:49 input.tar.gz
2025-10-21 00:58:47 (212697): Guest Log: -rw-r--r--. 1 root root    870400 Oct 21  2025 result.tar.gz
2025-10-21 00:58:47 (212697): Guest Log: -rw-r--r--. 1 root root     15120 Oct 21 03:49 start_atlas.sh
2025-10-21 00:58:47 (212697): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-21 00:58:47 (212697): VM Completion File Detected.
2025-10-21 00:58:47 (212697): Powering off VM.
2025-10-21 00:58:47 (212697): Successfully stopped VM.
2025-10-21 00:58:47 (212697): Deregistering VM. (boinc_809dc9dec5ba108e, slot#24)
2025-10-21 00:58:47 (212697): Removing network bandwidth throttle group from VM.
2025-10-21 00:58:47 (212697): Removing VM from VirtualBox.
2025-10-21 00:58:53 (212697): called boinc_finish(0)

</stderr_txt>
]]>

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