Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:49 (969112): wrapper (7.7.26015): starting
00:03:49 (969112): wrapper: running run_atlas (--nthreads 9)
[2025-10-21 00:03:49] Arguments: --nthreads 9
[2025-10-21 00:03:49] Threads: 9
[2025-10-21 00:03:49] Checking for CVMFS
[2025-10-21 00:03:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:03:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:03:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:03:52] 2.13.2.0 4296 10757 206904 151945 2 310 27619241 32935936 23377 16776704 0 39926371 99.627 36526742 28233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 00:03:52] CVMFS is ok
[2025-10-21 00:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:03:52] Further information can be found at the LHC@home message board.
[2025-10-21 00:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:03:52] Checking for apptainer binary...
[2025-10-21 00:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:03:52] Running /usr/bin/apptainer --version
[2025-10-21 00:03:52] apptainer version 1.4.3-1.el9
[2025-10-21 00:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:03:52] c-8-24.aglt2.org
[2025-10-21 00:03:52] apptainer works
[2025-10-21 00:03:53] Set ATHENA_PROC_NUMBER=9
[2025-10-21 00:03:53] Set ATHENA_CORE_NUMBER=9
[2025-10-21 00:03:53] Starting ATLAS job with PandaID=6852945894
[2025-10-21 00:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 09:53:27]  *** The last 200 lines of the pilot log: ***
[2025-10-21 09:53:27] 2025-10-21 13:52:51,963 | INFO     | time since job start (35274s) is within the limit (172800.0s)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,123 | INFO     | monitor loop #2064: job 0:6852945894 is in state 'finished'
[2025-10-21 09:53:27] 2025-10-21 13:52:52,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,606 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 09:53:27] 2025-10-21 13:52:52,673 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1660749999983
[2025-10-21 09:53:27] 2025-10-21 13:52:52,692 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852945894/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,694 | INFO     | extracted standard info from prmon json
[2025-10-21 09:53:27] 2025-10-21 13:52:52,694 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 09:53:27] 2025-10-21 13:52:52,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 09:53:27] 2025-10-21 13:52:52,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 09:53:27] 2025-10-21 13:52:52,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 09:53:27] 2025-10-21 13:52:52,709 | INFO     | fitting pss+swap vs Time
[2025-10-21 09:53:27] 2025-10-21 13:52:52,710 | INFO     | sum of square deviations: 59254241903.53949
[2025-10-21 09:53:27] 2025-10-21 13:52:52,718 | INFO     | sum of deviations: 310745464177.0731
[2025-10-21 09:53:27] 2025-10-21 13:52:52,719 | INFO     | mean x: 1761037156.9496527
[2025-10-21 09:53:27] 2025-10-21 13:52:52,719 | INFO     | mean y: 2095050.8645833333
[2025-10-21 09:53:27] 2025-10-21 13:52:52,719 | INFO     | -- intersect: -9233265848.026684
[2025-10-21 09:53:27] 2025-10-21 13:52:52,719 | INFO     | intersect: -9233265848.026684
[2025-10-21 09:53:27] 2025-10-21 13:52:52,720 | INFO     | chi2: 3.9698460057581353
[2025-10-21 09:53:27] 2025-10-21 13:52:52,721 | INFO     | sum of square deviations: 57724506167.52012
[2025-10-21 09:53:27] 2025-10-21 13:52:52,729 | INFO     | sum of deviations: 347577785670.9967
[2025-10-21 09:53:27] 2025-10-21 13:52:52,729 | INFO     | mean x: 1761037004.4535902
[2025-10-21 09:53:27] 2025-10-21 13:52:52,730 | INFO     | mean y: 2098701.660245184
[2025-10-21 09:53:27] 2025-10-21 13:52:52,730 | INFO     | -- intersect: -10601670531.398575
[2025-10-21 09:53:27] 2025-10-21 13:52:52,730 | INFO     | intersect: -10601670531.398575
[2025-10-21 09:53:27] 2025-10-21 13:52:52,731 | INFO     | chi2: 3.1556381329679297
[2025-10-21 09:53:27] 2025-10-21 13:52:52,731 | INFO     | current chi2=3.1556381329679297 (change=20.509809992861765 %)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,731 | INFO     | right removable region: 570
[2025-10-21 09:53:27] 2025-10-21 13:52:52,732 | INFO     | sum of square deviations: 57724348177.520164
[2025-10-21 09:53:27] 2025-10-21 13:52:52,740 | INFO     | sum of deviations: 188508533291.1928
[2025-10-21 09:53:27] 2025-10-21 13:52:52,740 | INFO     | mean x: 1761037309.4535902
[2025-10-21 09:53:27] 2025-10-21 13:52:52,740 | INFO     | mean y: 2107216.686514886
[2025-10-21 09:53:27] 2025-10-21 13:52:52,740 | INFO     | -- intersect: -5748855258.545824
[2025-10-21 09:53:27] 2025-10-21 13:52:52,740 | INFO     | intersect: -5748855258.545824
[2025-10-21 09:53:27] 2025-10-21 13:52:52,741 | INFO     | chi2: 1.5445016499550337
[2025-10-21 09:53:27] 2025-10-21 13:52:52,741 | INFO     | current chi2=1.5445016499550337 (change=61.09416718646558 %)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,742 | INFO     | sum of square deviations: 56221048041.895744
[2025-10-21 09:53:27] 2025-10-21 13:52:52,750 | INFO     | sum of deviations: 139641582236.43817
[2025-10-21 09:53:27] 2025-10-21 13:52:52,750 | INFO     | mean x: 1761037461.9558303
[2025-10-21 09:53:27] 2025-10-21 13:52:52,751 | INFO     | mean y: 2112168.8975265017
[2025-10-21 09:53:27] 2025-10-21 13:52:52,751 | INFO     | -- intersect: -4371944632.425335
[2025-10-21 09:53:27] 2025-10-21 13:52:52,751 | INFO     | intersect: -4371944632.425335
[2025-10-21 09:53:27] 2025-10-21 13:52:52,752 | INFO     | chi2: 1.2192646599719748
[2025-10-21 09:53:27] 2025-10-21 13:52:52,752 | INFO     | current chi2=1.2192646599719748 (change=21.057730174165098 %)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,752 | INFO     | left removable region: 20
[2025-10-21 09:53:27] 2025-10-21 13:52:52,753 | INFO     | sum of square deviations: 51586807505.25289
[2025-10-21 09:53:27] 2025-10-21 13:52:52,760 | INFO     | sum of deviations: 149417818428.0272
[2025-10-21 09:53:27] 2025-10-21 13:52:52,761 | INFO     | mean x: 1761037583.9436364
[2025-10-21 09:53:27] 2025-10-21 13:52:52,761 | INFO     | mean y: 2118990.9363636365
[2025-10-21 09:53:27] 2025-10-21 13:52:52,761 | INFO     | -- intersect: -5098611344.737701
[2025-10-21 09:53:27] 2025-10-21 13:52:52,761 | INFO     | intersect: -5098611344.737701
[2025-10-21 09:53:27] 2025-10-21 13:52:52,762 | INFO     | chi2: 0.33532267653981584
[2025-10-21 09:53:27] 2025-10-21 13:52:52,762 | INFO     | -- intersect: -5098611344.737701
[2025-10-21 09:53:27] 2025-10-21 13:52:52,762 | INFO     | current memory leak: 2.90 B/s (using 550 data points, chi2=0.34)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,763 | INFO     | could have reported an average CPU frequency of 2601 MHz (23 samples)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | ..............................
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . Timing measurements:
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . get job = 0 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . initial setup = 6 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . payload setup = 31 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . stage-in = 0 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . payload execution = 35147 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,764 | INFO     | . stage-out = 5 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,765 | INFO     | . log creation = 0 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,765 | INFO     | ..............................
[2025-10-21 09:53:27] 2025-10-21 13:52:52,930 | INFO     | 
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | job summary report
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | --------------------------------------------------
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | PanDA job id: 6852945894
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | task id: 46771637
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | errors: (none)
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | pilot state: finished 
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | transexitcode: 0
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | exeerrorcode: 0
[2025-10-21 09:53:27] 2025-10-21 13:52:52,931 | INFO     | exeerrordiag: 
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | exitcode: 0
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | exitmsg: OK
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | cpuconsumptiontime: 55481 s
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | nevents: 400
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | neventsw: 0
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | pid: 1001908
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | pgrp: 1001908
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | corecount: 9
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | event service: False
[2025-10-21 09:53:27] 2025-10-21 13:52:52,932 | INFO     | sizes: {0: 2348704, 1: 2348760, 2: 2348987, 3: 2348987, 14: 2349015, 24: 2349043, 25: 2349461, 35: 2349489, 35182: 2389540, 35183: 2389539, 35188: 2398593, 35191: 
[2025-10-21 09:53:27] 2025-10-21 13:52:52,933 | INFO     | --------------------------------------------------
[2025-10-21 09:53:27] 2025-10-21 13:52:52,933 | INFO     | 
[2025-10-21 09:53:27] 2025-10-21 13:52:52,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 09:53:27] 2025-10-21 13:52:53,121 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,122 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,122 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,122 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 09:53:27] 2025-10-21 13:52:53,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 09:53:27] 2025-10-21 13:52:53,124 | INFO     | job 6852945894 has completed (purged errors)
[2025-10-21 09:53:27] 2025-10-21 13:52:53,124 | INFO     | overall cleanup function is called
[2025-10-21 09:53:27] 2025-10-21 13:52:54,138 | INFO     | --- collectZombieJob: --- 10, [1001908]
[2025-10-21 09:53:27] 2025-10-21 13:52:54,138 | INFO     | zombie collector waiting for pid 1001908
[2025-10-21 09:53:27] 2025-10-21 13:52:54,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 09:53:27] 2025-10-21 13:52:54,139 | INFO     | collected zombie processes
[2025-10-21 09:53:27] 2025-10-21 13:52:54,139 | INFO     | will attempt to kill all subprocesses of pid=1001908
[2025-10-21 09:53:27] 2025-10-21 13:52:55,364 | INFO     | process IDs to be killed: [1001908] (in reverse order)
[2025-10-21 09:53:27] 2025-10-21 13:52:55,501 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 09:53:27] 2025-10-21 13:52:55,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 09:53:27] 2025-10-21 13:52:55,515 | INFO     | did not find any defunct processes belonging to 1001908
[2025-10-21 09:53:27] 2025-10-21 13:52:55,527 | INFO     | did not find any defunct processes belonging to 1001908
[2025-10-21 09:53:27] 2025-10-21 13:52:55,528 | INFO     | ready for new job
[2025-10-21 09:53:27] 2025-10-21 13:52:55,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 09:53:27] 2025-10-21 13:52:55,532 | INFO     | ***************************************
[2025-10-21 09:53:27] 2025-10-21 13:52:55,532 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 09:53:27] 2025-10-21 13:52:55,532 | INFO     | ***************************************
[2025-10-21 09:53:27] 2025-10-21 13:52:55,532 | INFO     | 
[2025-10-21 09:53:27] 2025-10-21 13:52:55,546 | INFO     | architecture information:
[2025-10-21 09:53:27] 2025-10-21 13:52:55,547 | INFO     | executing command: cat /etc/os-release
[2025-10-21 09:53:27] 2025-10-21 13:52:55,565 | INFO     | cat /etc/os-release:
[2025-10-21 09:53:27] NAME="CentOS Linux"
[2025-10-21 09:53:27] VERSION="7 (Core)"
[2025-10-21 09:53:27] ID="centos"
[2025-10-21 09:53:27] ID_LIKE="rhel fedora"
[2025-10-21 09:53:27] VERSION_ID="7"
[2025-10-21 09:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 09:53:27] ANSI_COLOR="0;31"
[2025-10-21 09:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 09:53:27] HOME_URL="https://www.centos.org/"
[2025-10-21 09:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 09:53:27] 
[2025-10-21 09:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 09:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 09:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 09:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 09:53:27] 
[2025-10-21 09:53:27] 2025-10-21 13:52:55,566 | INFO     | ***************************************
[2025-10-21 09:53:27] 2025-10-21 13:52:56,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 09:53:27] 2025-10-21 13:52:56,106 | INFO     | sufficient remaining disk space (75857133568 B)
[2025-10-21 09:53:27] 2025-10-21 13:52:56,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 09:53:27] 2025-10-21 13:52:56,106 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 09:53:27] 2025-10-21 13:52:56,107 | INFO     | update_server=False
[2025-10-21 09:53:27] 2025-10-21 13:52:56,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 09:53:27] 2025-10-21 13:52:56,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 09:53:27] 2025-10-21 13:52:56,107 | INFO     | aborting loop
[2025-10-21 09:53:27] 2025-10-21 13:52:56,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 09:53:27] 2025-10-21 13:52:56,525 | INFO     | all job control threads have been joined
[2025-10-21 09:53:27] 2025-10-21 13:52:56,530 | INFO     | all data control threads have been joined
[2025-10-21 09:53:27] 2025-10-21 13:52:56,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 09:53:27] 2025-10-21 13:52:57,112 | INFO     | [job] retrieve thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,113 | INFO     | [job] job monitor thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,125 | INFO     | [payload] validate_post thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,311 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,378 | INFO     | all payload control threads have been joined
[2025-10-21 09:53:27] 2025-10-21 13:52:57,531 | INFO     | [job] control thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,553 | INFO     | [data] control thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,738 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,928 | INFO     | [data] copytool_in thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,934 | INFO     | [job] validate thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:57,942 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:58,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 09:53:27] 2025-10-21 13:52:58,141 | INFO     | [payload] failed_post thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:58,158 | INFO     | [data] copytool_out thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:58,384 | INFO     | [payload] control thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:52:59,049 | INFO     | [job] queue monitor thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:53:00,858 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 09:53:27] 2025-10-21 13:53:04,233 | INFO     | [monitor] cgroup control has ended
[2025-10-21 09:53:27] 2025-10-21 13:53:04,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947561289536)>', '<ExcThread(monitor, started 139946895578880)>']
[2025-10-21 09:53:27] 2025-10-21 13:53:09,681 | INFO     | all workflow threads have been joined
[2025-10-21 09:53:27] 2025-10-21 13:53:09,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 09:53:27] 2025-10-21 13:53:09,683 | INFO     | traces error code: 0
[2025-10-21 09:53:27] 2025-10-21 13:53:09,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 09:53:27] 2025-10-21 13:53:26,283 | INFO     | PID=978290 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 09:53:27] 2025-10-21 13:53:26,283 | INFO     | .. there are 20 such processes running
[2025-10-21 09:53:27] 2025-10-21 13:53:26,283 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 09:53:27] 2025-10-21 13:53:26,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 09:53:27] 2025-10-21 13:53:26,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 09:53:27] 2025-10-21 13:53:26,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 09:53:27] 2025-10-21 13:53:26,284 | INFO     | [monitor] control thread has ended
[2025-10-21 09:53:27] 2025-10-21 13:53:26,778 [wrapper] ==== pilot stdout END ====
[2025-10-21 09:53:27] 2025-10-21 13:53:26,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 09:53:27] 2025-10-21 13:53:26,784 [wrapper] pilotpid: 978290
[2025-10-21 09:53:27] 2025-10-21 13:53:26,787 [wrapper] Pilot exit status: 0
[2025-10-21 09:53:27] 2025-10-21 13:53:26,802 [wrapper] pandaids: 6852945894
[2025-10-21 09:53:27] 2025-10-21 13:53:27,093 [wrapper] cleanup supervisor_pilot 2202119 978291
[2025-10-21 09:53:27] 2025-10-21 13:53:27,098 [wrapper] Test setup, not cleaning
[2025-10-21 09:53:27] 2025-10-21 13:53:27,119 [wrapper] apfmon messages muted
[2025-10-21 09:53:27] 2025-10-21 13:53:27,132 [wrapper] ==== wrapper stdout END ====
[2025-10-21 09:53:27] 2025-10-21 13:53:27,167 [wrapper] ==== wrapper stderr END ====
[2025-10-21 09:53:27]  *** Error codes and diagnostics ***
[2025-10-21 09:53:27]     "exeErrorCode": 0,
[2025-10-21 09:53:27]     "exeErrorDiag": "",
[2025-10-21 09:53:27]     "pilotErrorCode": 0,
[2025-10-21 09:53:27]     "pilotErrorDiag": "",
[2025-10-21 09:53:27]  *** Listing of results directory ***
[2025-10-21 09:53:27] total 438376
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 17:57 pilot3.tar.gz
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 17:57 queuedata.json
[2025-10-21 09:53:27] -rwx------. 1 boincer umatlas     36292 Oct 20 18:01 runpilot2-wrapper.sh
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 09:53:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:03 run_atlas
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:03 job.xml
[2025-10-21 09:53:27] -rw-r--r--. 2 boincer umatlas 228444594 Oct 21 00:03 EVNT.46771634._002101.pool.root.1
[2025-10-21 09:53:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:03 start_atlas.sh
[2025-10-21 09:53:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 00:03 shared
[2025-10-21 09:53:27] -rw-r--r--. 2 boincer umatlas    569678 Oct 21 00:03 input.tar.gz
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:03 boinc_lockfile
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 00:03 pandaJob.out
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas    978830 Oct 21 00:04 agis_schedconf.cvmfs.json
[2025-10-21 09:53:27] drwx------. 5 boincer umatlas      4096 Oct 21 00:04 pilot3
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas      6658 Oct 21 09:49 init_data.xml
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas 206477268 Oct 21 09:51 HITS.46771637._053028.pool.root.1
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas       531 Oct 21 09:51 boinc_task_state.xml
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas      1042 Oct 21 09:52 memory_monitor_summary.json
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas   1560740 Oct 21 09:52 agis_ddmendpoints.agis.ALL.json
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas    748068 Oct 21 09:52 log.46771637._053028.job.log.tgz.1
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas        95 Oct 21 09:52 pilot_heartbeat.json
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas      7826 Oct 21 09:52 heartbeat.json
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 09:53 boinc_mmap_file
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas        28 Oct 21 09:53 wrapper_checkpoint.txt
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas       822 Oct 21 09:53 pilotlog.txt
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas   4291442 Oct 21 09:53 log.46771637._053028.job.log.1
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas       357 Oct 21 09:53 output.list
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas       620 Oct 21 09:53 runtime_log
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas   5058560 Oct 21 09:53 result.tar.gz
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas      8694 Oct 21 09:53 runtime_log.err
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas       657 Oct 21 09:53 oEaLDmE7CV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOkzNDmKnUtym.diag
[2025-10-21 09:53:27] -rw-r--r--. 1 boincer umatlas     21249 Oct 21 09:53 stderr.txt
[2025-10-21 09:53:27] HITS file was successfully produced:
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas 206477268 Oct 21 09:51 shared/HITS.pool.root.1
[2025-10-21 09:53:27]  *** Contents of shared directory: ***
[2025-10-21 09:53:27] total 430252
[2025-10-21 09:53:27] -rw-r--r--. 2 boincer umatlas 228444594 Oct 21 00:03 ATLAS.root_0
[2025-10-21 09:53:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:03 start_atlas.sh
[2025-10-21 09:53:27] -rw-r--r--. 2 boincer umatlas    569678 Oct 21 00:03 input.tar.gz
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas 206477268 Oct 21 09:51 HITS.pool.root.1
[2025-10-21 09:53:27] -rw-------. 1 boincer umatlas   5058560 Oct 21 09:53 result.tar.gz
09:53:29 (969112): run_atlas exited; CPU time 56568.028889
09:53:29 (969112): called boinc_finish(0)

</stderr_txt>
]]>

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