Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:04:44 (8919): wrapper (7.7.26015): starting
11:04:44 (8919): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 11:04:44] Arguments: --nthreads 8
[2025-10-21 11:04:44] Threads: 8
[2025-10-21 11:04:44] Checking for CVMFS
[2025-10-21 11:04:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 11:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 11:04:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 11:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 11:04:47] 2.11.2.0 23426 120132 111736 151951 2 60 20757039 25165824 4632 130560 0 38659747 99.924 16458388 2293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-21 11:04:47] CVMFS is ok
[2025-10-21 11:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 11:04:47] Checking for apptainer binary...
[2025-10-21 11:04:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 11:04:47] Running /usr/bin/apptainer --version
[2025-10-21 11:04:47] apptainer version 1.3.2-1.el7
[2025-10-21 11:04:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 11:04:50] cg-vwn332.simple-grid.lan
[2025-10-21 11:04:50] apptainer works
[2025-10-21 11:04:51] Set ATHENA_PROC_NUMBER=8
[2025-10-21 11:04:51] Set ATHENA_CORE_NUMBER=8
[2025-10-21 11:04:51] Starting ATLAS job with PandaID=6852945336
[2025-10-21 11:04:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 15:40:26]  *** The last 200 lines of the pilot log: ***
[2025-10-21 15:40:26] 2025-10-21 13:39:48,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 15:40:26] 2025-10-21 13:39:48,514 | INFO     | fitting pss+swap vs Time
[2025-10-21 15:40:26] 2025-10-21 13:39:48,515 | INFO     | sum of square deviations: 5449944045.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,517 | INFO     | sum of deviations: 16382260772.000011
[2025-10-21 15:40:26] 2025-10-21 13:39:48,517 | INFO     | mean x: 1761045943.5
[2025-10-21 15:40:26] 2025-10-21 13:39:48,517 | INFO     | mean y: 2485518.6692307694
[2025-10-21 15:40:26] 2025-10-21 13:39:48,517 | INFO     | -- intersect: -5291131010.175296
[2025-10-21 15:40:26] 2025-10-21 13:39:48,517 | INFO     | intersect: -5291131010.175296
[2025-10-21 15:40:26] 2025-10-21 13:39:48,518 | INFO     | chi2: 2.3518984026320267
[2025-10-21 15:40:26] 2025-10-21 13:39:48,518 | INFO     | sum of square deviations: 5141528960.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,527 | INFO     | sum of deviations: 33323022721.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,527 | INFO     | mean x: 1761045791.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,527 | INFO     | mean y: 2493762.466666667
[2025-10-21 15:40:26] 2025-10-21 13:39:48,528 | INFO     | -- intersect: -11411108954.304651
[2025-10-21 15:40:26] 2025-10-21 13:39:48,528 | INFO     | intersect: -11411108954.304651
[2025-10-21 15:40:26] 2025-10-21 13:39:48,528 | INFO     | chi2: 1.5789751867401884
[2025-10-21 15:40:26] 2025-10-21 13:39:48,528 | INFO     | current chi2=1.5789751867401884 (change=32.86380121806513 %)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,529 | INFO     | sum of square deviations: 4844974562.5
[2025-10-21 15:40:26] 2025-10-21 13:39:48,531 | INFO     | sum of deviations: 32748463324.500004
[2025-10-21 15:40:26] 2025-10-21 13:39:48,531 | INFO     | mean x: 1761045638.5
[2025-10-21 15:40:26] 2025-10-21 13:39:48,531 | INFO     | mean y: 2493466.98
[2025-10-21 15:40:26] 2025-10-21 13:39:48,531 | INFO     | -- intersect: -11900879349.786556
[2025-10-21 15:40:26] 2025-10-21 13:39:48,531 | INFO     | intersect: -11900879349.786556
[2025-10-21 15:40:26] 2025-10-21 13:39:48,532 | INFO     | chi2: 1.5796306088231769
[2025-10-21 15:40:26] 2025-10-21 13:39:48,532 | INFO     | current chi2=1.5796306088231769 (change=-0.0415093339333303 %)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,532 | INFO     | right removable region: 249
[2025-10-21 15:40:26] 2025-10-21 13:39:48,533 | INFO     | sum of square deviations: 5141528960.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,535 | INFO     | sum of deviations: -28162051414.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,535 | INFO     | mean x: 1761046096.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,535 | INFO     | mean y: 2507391.4156862744
[2025-10-21 15:40:26] 2025-10-21 13:39:48,535 | INFO     | -- intersect: 9648406711.211792
[2025-10-21 15:40:26] 2025-10-21 13:39:48,535 | INFO     | intersect: 9648406711.211792
[2025-10-21 15:40:26] 2025-10-21 13:39:48,536 | INFO     | chi2: 0.8234055681872299
[2025-10-21 15:40:26] 2025-10-21 13:39:48,536 | INFO     | current chi2=0.8234055681872299 (change=64.9897475475237 %)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,536 | INFO     | sum of square deviations: 4844974562.5
[2025-10-21 15:40:26] 2025-10-21 13:39:48,539 | INFO     | sum of deviations: -31097622398.5
[2025-10-21 15:40:26] 2025-10-21 13:39:48,539 | INFO     | mean x: 1761046248.5
[2025-10-21 15:40:26] 2025-10-21 13:39:48,539 | INFO     | mean y: 2508880.124
[2025-10-21 15:40:26] 2025-10-21 13:39:48,539 | INFO     | -- intersect: 11305839899.862041
[2025-10-21 15:40:26] 2025-10-21 13:39:48,539 | INFO     | intersect: 11305839899.862041
[2025-10-21 15:40:26] 2025-10-21 13:39:48,540 | INFO     | chi2: 0.8034885921471914
[2025-10-21 15:40:26] 2025-10-21 13:39:48,540 | INFO     | current chi2=0.8034885921471914 (change=2.4188536985348255 %)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,540 | INFO     | left removable region: 20
[2025-10-21 15:40:26] 2025-10-21 13:39:48,541 | INFO     | sum of square deviations: 3723716330.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,542 | INFO     | sum of deviations: -11720020340.999998
[2025-10-21 15:40:26] 2025-10-21 13:39:48,543 | INFO     | mean x: 1761046218.0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,543 | INFO     | mean y: 2517100.445414847
[2025-10-21 15:40:26] 2025-10-21 13:39:48,543 | INFO     | -- intersect: 5545231869.054311
[2025-10-21 15:40:26] 2025-10-21 13:39:48,543 | INFO     | intersect: 5545231869.054311
[2025-10-21 15:40:26] 2025-10-21 13:39:48,543 | INFO     | chi2: 0.012782102580312127
[2025-10-21 15:40:26] 2025-10-21 13:39:48,544 | INFO     | -- intersect: 5545231869.054311
[2025-10-21 15:40:26] 2025-10-21 13:39:48,544 | INFO     | current memory leak: -3.15 B/s (using 229 data points, chi2=0.01)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,545 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,551 | INFO     | ..............................
[2025-10-21 15:40:26] 2025-10-21 13:39:48,551 | INFO     | . Timing measurements:
[2025-10-21 15:40:26] 2025-10-21 13:39:48,551 | INFO     | . get job = 0 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,551 | INFO     | . initial setup = 12 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,552 | INFO     | . payload setup = 102 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,552 | INFO     | . stage-in = 0 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,552 | INFO     | . payload execution = 15862 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,552 | INFO     | . stage-out = 4 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,552 | INFO     | . log creation = 1 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,552 | INFO     | ..............................
[2025-10-21 15:40:26] 2025-10-21 13:39:48,745 | INFO     | 
[2025-10-21 15:40:26] 2025-10-21 13:39:48,745 | INFO     | job summary report
[2025-10-21 15:40:26] 2025-10-21 13:39:48,745 | INFO     | --------------------------------------------------
[2025-10-21 15:40:26] 2025-10-21 13:39:48,745 | INFO     | PanDA job id: 6852945336
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | task id: 46771637
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | errors: (none)
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | pilot state: finished 
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | transexitcode: 0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | exeerrorcode: 0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | exeerrordiag: 
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | exitcode: 0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | exitmsg: OK
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | cpuconsumptiontime: 61062 s
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | nevents: 400
[2025-10-21 15:40:26] 2025-10-21 13:39:48,746 | INFO     | neventsw: 0
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | pid: 19328
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | pgrp: 19328
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | corecount: 8
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | event service: False
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | sizes: {0: 2348102, 1: 2348788, 2: 2348987, 13: 2348987, 23: 2349043, 34: 2349071, 45: 2349227, 56: 2349255, 66: 2349283, 77: 2349311, 88: 2349367, 94: 2349937, 98
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | --------------------------------------------------
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | 
[2025-10-21 15:40:26] 2025-10-21 13:39:48,747 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-10-21 15:40:26] 2025-10-21 13:39:49,025 | INFO     | time since job start (16265s) is within the limit (172800.0s)
[2025-10-21 15:40:26] 2025-10-21 13:39:49,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 15:40:26] 2025-10-21 13:39:49,392 | INFO     | job 6852945336 has completed (purged errors)
[2025-10-21 15:40:26] 2025-10-21 13:39:49,392 | INFO     | overall cleanup function is called
[2025-10-21 15:40:26] 2025-10-21 13:39:50,401 | INFO     | --- collectZombieJob: --- 10, [19328]
[2025-10-21 15:40:26] 2025-10-21 13:39:50,401 | INFO     | zombie collector waiting for pid 19328
[2025-10-21 15:40:26] 2025-10-21 13:39:50,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 15:40:26] 2025-10-21 13:39:50,401 | INFO     | collected zombie processes
[2025-10-21 15:40:26] 2025-10-21 13:39:50,402 | INFO     | will attempt to kill all subprocesses of pid=19328
[2025-10-21 15:40:26] 2025-10-21 13:39:50,540 | INFO     | process IDs to be killed: [19328] (in reverse order)
[2025-10-21 15:40:26] 2025-10-21 13:39:51,390 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 15:40:26] 2025-10-21 13:39:51,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 15:40:26] 2025-10-21 13:39:51,393 | INFO     | did not find any defunct processes belonging to 19328
[2025-10-21 15:40:26] 2025-10-21 13:39:51,396 | INFO     | did not find any defunct processes belonging to 19328
[2025-10-21 15:40:26] 2025-10-21 13:39:51,396 | INFO     | ready for new job
[2025-10-21 15:40:26] 2025-10-21 13:39:51,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 15:40:26] 2025-10-21 13:39:51,398 | INFO     | ***************************************
[2025-10-21 15:40:26] 2025-10-21 13:39:51,398 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 15:40:26] 2025-10-21 13:39:51,398 | INFO     | ***************************************
[2025-10-21 15:40:26] 2025-10-21 13:39:51,399 | INFO     | 
[2025-10-21 15:40:26] 2025-10-21 13:39:51,399 | INFO     | pilot is running in a VM
[2025-10-21 15:40:26] 2025-10-21 13:39:51,399 | INFO     | architecture information:
[2025-10-21 15:40:26] 2025-10-21 13:39:51,413 | INFO     | executing command: cat /etc/os-release
[2025-10-21 15:40:26] 2025-10-21 13:39:51,622 | INFO     | cat /etc/os-release:
[2025-10-21 15:40:26] NAME="CentOS Linux"
[2025-10-21 15:40:26] VERSION="7 (Core)"
[2025-10-21 15:40:26] ID="centos"
[2025-10-21 15:40:26] ID_LIKE="rhel fedora"
[2025-10-21 15:40:26] VERSION_ID="7"
[2025-10-21 15:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 15:40:26] ANSI_COLOR="0;31"
[2025-10-21 15:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 15:40:26] HOME_URL="https://www.centos.org/"
[2025-10-21 15:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 15:40:26] 
[2025-10-21 15:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 15:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 15:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 15:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 15:40:26] 
[2025-10-21 15:40:26] 2025-10-21 13:39:51,622 | INFO     | ***************************************
[2025-10-21 15:40:26] 2025-10-21 13:39:52,125 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-10-21 15:40:26] 2025-10-21 13:39:52,305 | INFO     | sufficient remaining disk space (495813918720 B)
[2025-10-21 15:40:26] 2025-10-21 13:39:52,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 15:40:26] 2025-10-21 13:39:52,305 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 15:40:26] 2025-10-21 13:39:52,306 | INFO     | update_server=False
[2025-10-21 15:40:26] 2025-10-21 13:39:52,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 15:40:26] 2025-10-21 13:39:52,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 15:40:26] 2025-10-21 13:39:52,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 15:40:26] 2025-10-21 13:39:52,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:40:26] 2025-10-21 13:39:52,320 | INFO     | aborting loop
[2025-10-21 15:40:26] 2025-10-21 13:39:52,391 | INFO     | all data control threads have been joined
[2025-10-21 15:40:26] 2025-10-21 13:39:53,311 | INFO     | [job] retrieve thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:53,326 | INFO     | [job] job monitor thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:53,397 | INFO     | [data] control thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:53,630 | INFO     | all payload control threads have been joined
[2025-10-21 15:40:26] 2025-10-21 13:39:53,701 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:53,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:40:26] 2025-10-21 13:39:53,779 | INFO     | [payload] failed_post thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:53,806 | INFO     | [job] validate thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:53,868 | INFO     | all job control threads have been joined
[2025-10-21 15:40:26] 2025-10-21 13:39:54,103 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,104 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,138 | INFO     | [payload] validate_post thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,158 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,316 | INFO     | [data] copytool_out thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,362 | INFO     | [data] copytool_in thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,636 | INFO     | [payload] control thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,772 | INFO     | [job] queue monitor thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:54,874 | INFO     | [job] control thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:39:56,320 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 15:40:26] 2025-10-21 13:40:11,545 | INFO     | [monitor] cgroup control has ended
[2025-10-21 15:40:26] 2025-10-21 13:40:12,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442622474048)>', '<ExcThread(monitor, started 140441731196672)>']
[2025-10-21 15:40:26] 2025-10-21 13:40:17,244 | INFO     | all workflow threads have been joined
[2025-10-21 15:40:26] 2025-10-21 13:40:17,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 15:40:26] 2025-10-21 13:40:17,245 | INFO     | traces error code: 0
[2025-10-21 15:40:26] 2025-10-21 13:40:17,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 15:40:26] 2025-10-21 13:40:22,228 | INFO     | PID=12696 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 15:40:26] 2025-10-21 13:40:22,228 | INFO     | .. there are 9 such processes running
[2025-10-21 15:40:26] 2025-10-21 13:40:22,236 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 15:40:26] 2025-10-21 13:40:22,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 15:40:26] 2025-10-21 13:40:22,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 15:40:26] 2025-10-21 13:40:22,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 15:40:26] 2025-10-21 13:40:22,237 | INFO     | [monitor] control thread has ended
[2025-10-21 15:40:26] 2025-10-21 13:40:22,581 [wrapper] ==== pilot stdout END ====
[2025-10-21 15:40:26] 2025-10-21 13:40:22,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 15:40:26] 2025-10-21 13:40:22,722 [wrapper] pilotpid: 12696
[2025-10-21 15:40:26] 2025-10-21 13:40:22,786 [wrapper] Pilot exit status: 0
[2025-10-21 15:40:26] 2025-10-21 13:40:23,201 [wrapper] pandaids: 6852945336
[2025-10-21 15:40:26] 2025-10-21 13:40:23,879 [wrapper] cleanup supervisor_pilot 32064 12697
[2025-10-21 15:40:26] 2025-10-21 13:40:23,982 [wrapper] Test setup, not cleaning
[2025-10-21 15:40:26] 2025-10-21 13:40:24,097 [wrapper] apfmon messages muted
[2025-10-21 15:40:26] 2025-10-21 13:40:24,188 [wrapper] ==== wrapper stdout END ====
[2025-10-21 15:40:26] 2025-10-21 13:40:24,292 [wrapper] ==== wrapper stderr END ====
[2025-10-21 15:40:26]  *** Error codes and diagnostics ***
[2025-10-21 15:40:26]     "exeErrorCode": 0,
[2025-10-21 15:40:26]     "exeErrorDiag": "",
[2025-10-21 15:40:26]     "pilotErrorCode": 0,
[2025-10-21 15:40:26]     "pilotErrorDiag": "",
[2025-10-21 15:40:26]  *** Listing of results directory ***
[2025-10-21 15:40:26] total 439120
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-21 15:40:26] -rwx------. 1 boinc boinc     36292 Oct 20 23:47 runpilot2-wrapper.sh
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc      5112 Oct 20 23:47 queuedata.json
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc       100 Oct 21 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 15:40:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct 21 11:04 run_atlas
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc       105 Oct 21 11:04 job.xml
[2025-10-21 15:40:26] -rw-r--r--. 2 boinc boinc 229864969 Oct 21 11:04 EVNT.46771634._002087.pool.root.1
[2025-10-21 15:40:26] -rw-r--r--. 2 boinc boinc     15120 Oct 21 11:04 start_atlas.sh
[2025-10-21 15:40:26] drwxrwx--x. 2 boinc boinc        68 Oct 21 11:04 shared
[2025-10-21 15:40:26] -rw-r--r--. 2 boinc boinc    569673 Oct 21 11:04 input.tar.gz
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc      6390 Oct 21 11:04 init_data.xml
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc         0 Oct 21 11:04 boinc_lockfile
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc      2559 Oct 21 11:04 pandaJob.out
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc    978830 Oct 21 11:08 agis_schedconf.cvmfs.json
[2025-10-21 15:40:26] drwx------. 5 boinc boinc      4096 Oct 21 11:08 pilot3
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc 210575797 Oct 21 15:36 HITS.46771637._052678.pool.root.1
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc       531 Oct 21 15:37 boinc_task_state.xml
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc      1018 Oct 21 15:37 memory_monitor_summary.json
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc   1560740 Oct 21 15:38 agis_ddmendpoints.agis.ALL.json
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc    490197 Oct 21 15:38 log.46771637._052678.job.log.tgz.1
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc      7788 Oct 21 15:39 heartbeat.json
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc      8192 Oct 21 15:39 boinc_mmap_file
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc        28 Oct 21 15:40 wrapper_checkpoint.txt
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc        95 Oct 21 15:40 pilot_heartbeat.json
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc       820 Oct 21 15:40 pilotlog.txt
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc   2176922 Oct 21 15:40 log.46771637._052678.job.log.1
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc       357 Oct 21 15:40 output.list
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc       620 Oct 21 15:40 runtime_log
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc   2682880 Oct 21 15:40 result.tar.gz
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc       657 Oct 21 15:40 UUyMDmOuCV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxfzNDmUfIWqn.diag
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc      8717 Oct 21 15:40 runtime_log.err
[2025-10-21 15:40:26] -rw-r--r--. 1 boinc boinc     20562 Oct 21 15:40 stderr.txt
[2025-10-21 15:40:26] HITS file was successfully produced:
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc 210575797 Oct 21 15:36 shared/HITS.pool.root.1
[2025-10-21 15:40:26]  *** Contents of shared directory: ***
[2025-10-21 15:40:26] total 433320
[2025-10-21 15:40:26] -rw-r--r--. 2 boinc boinc 229864969 Oct 21 11:04 ATLAS.root_0
[2025-10-21 15:40:26] -rw-r--r--. 2 boinc boinc     15120 Oct 21 11:04 start_atlas.sh
[2025-10-21 15:40:26] -rw-r--r--. 2 boinc boinc    569673 Oct 21 11:04 input.tar.gz
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc 210575797 Oct 21 15:36 HITS.pool.root.1
[2025-10-21 15:40:26] -rw-------. 1 boinc boinc   2682880 Oct 21 15:40 result.tar.gz
15:40:28 (8919): run_atlas exited; CPU time 61271.893142
15:40:28 (8919): called boinc_finish(0)

</stderr_txt>
]]>

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