Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:03:04 (1915589): wrapper (7.7.26015): starting
00:03:04 (1915589): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 00:03:04] Arguments: --nthreads 3
[2025-10-21 00:03:04] Threads: 3
[2025-10-21 00:03:04] Checking for CVMFS
[2025-10-21 00:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:03:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:03:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:03:07] 2.9.2.0 1915784 0 30028 151936 3 1 30030673 36864001 0 130560 0 0 0.000 1291 2459 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 00:03:07] CVMFS is ok
[2025-10-21 00:03:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:03:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:03:07] Further information can be found at the LHC@home message board.
[2025-10-21 00:03:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:03:07] Checking for apptainer binary...
[2025-10-21 00:03:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:03:07] Running /usr/bin/apptainer --version
[2025-10-21 00:03:07] apptainer version 1.4.1-1.1
[2025-10-21 00:03:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:03:07] thA367
[2025-10-21 00:03:07] apptainer works
[2025-10-21 00:03:07] Set ATHENA_PROC_NUMBER=3
[2025-10-21 00:03:07] Set ATHENA_CORE_NUMBER=3
[2025-10-21 00:03:07] Starting ATLAS job with PandaID=6852940946
[2025-10-21 00:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 01:31:47]  *** The last 200 lines of the pilot log: ***
[2025-10-21 01:31:47] ]
[2025-10-21 01:31:47] 2025-10-20 23:31:04,687 | INFO     | transferring file log.46771637._051068.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6852940946/log.46771637._051068.job.log.tgz.1 to /local/data/boinc/
[2025-10-21 01:31:47] 2025-10-20 23:31:04,687 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6852940946/log.46771637._051068.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0510
[2025-10-21 01:31:47] 2025-10-20 23:31:04,701 | INFO     | adding to output.list: log.46771637._051068.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/28/log.46771637._051068.job.log.tg
[2025-10-21 01:31:47] 2025-10-20 23:31:04,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-21 01:31:47] 2025-10-20 23:31:04,701 | INFO     | summary of transferred files:
[2025-10-21 01:31:47] 2025-10-20 23:31:04,701 | INFO     |  -- lfn=log.46771637._051068.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 01:31:47] 2025-10-20 23:31:04,701 | INFO     | stage-out finished correctly
[2025-10-21 01:31:47] 2025-10-20 23:31:04,802 | INFO     | monitor loop #406: job 0:6852940946 is in state 'finished'
[2025-10-21 01:31:47] 2025-10-20 23:31:04,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 01:31:47] 2025-10-20 23:31:06,396 | INFO     | time since job start (5269s) is within the limit (172800.0s)
[2025-10-21 01:31:47] 2025-10-20 23:31:07,307 | INFO     | monitor loop #407: job 0:6852940946 is in state 'finished'
[2025-10-21 01:31:47] 2025-10-20 23:31:07,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 01:31:47] 2025-10-20 23:31:08,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 01:31:47] 2025-10-20 23:31:08,403 | INFO     | time since job start (5271s) is within the limit (172800.0s)
[2025-10-21 01:31:47] 2025-10-20 23:31:09,810 | INFO     | monitor loop #408: job 0:6852940946 is in state 'finished'
[2025-10-21 01:31:47] 2025-10-20 23:31:09,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 01:31:47] 2025-10-20 23:31:10,409 | INFO     | time since job start (5273s) is within the limit (172800.0s)
[2025-10-21 01:31:47] 2025-10-20 23:31:10,792 | INFO     | job 6852940946 has state=finished
[2025-10-21 01:31:47] 2025-10-20 23:31:10,792 | INFO     | preparing for final server update for job 6852940946 in state='finished'
[2025-10-21 01:31:47] 2025-10-20 23:31:10,793 | INFO     | this job has now completed (state=finished)
[2025-10-21 01:31:47] 2025-10-20 23:31:10,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 01:31:47] 2025-10-20 23:31:10,793 | INFO     | log transfer has been attempted: DONE
[2025-10-21 01:31:47] 2025-10-20 23:31:10,793 | INFO     | job 6852940946 has finished - writing final server update
[2025-10-21 01:31:47] 2025-10-20 23:31:10,793 | INFO     | total number of processed events: 400 (read)
[2025-10-21 01:31:47] 2025-10-20 23:31:10,794 | INFO     | executing command: lscpu
[2025-10-21 01:31:47] 2025-10-20 23:31:10,810 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 01:31:47] 2025-10-20 23:31:12,315 | INFO     | monitor loop #409: job 0:6852940946 is in state 'finished'
[2025-10-21 01:31:47] 2025-10-20 23:31:12,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 01:31:47] 2025-10-20 23:31:12,414 | INFO     | time since job start (5275s) is within the limit (172800.0s)
[2025-10-21 01:31:47] 2025-10-20 23:31:14,418 | INFO     | time since job start (5277s) is within the limit (172800.0s)
[2025-10-21 01:31:47] 2025-10-20 23:31:14,819 | INFO     | monitor loop #410: job 0:6852940946 is in state 'finished'
[2025-10-21 01:31:47] 2025-10-20 23:31:14,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,365 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 01:31:47] 2025-10-20 23:31:15,366 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3681.8424166666664
[2025-10-21 01:31:47] 2025-10-20 23:31:15,367 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6852940946/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,368 | INFO     | extracted standard info from prmon json
[2025-10-21 01:31:47] 2025-10-20 23:31:15,368 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 01:31:47] 2025-10-20 23:31:15,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 01:31:47] 2025-10-20 23:31:15,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 01:31:47] 2025-10-20 23:31:15,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | fitting pss+swap vs Time
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | sum of square deviations: 152858680.0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | sum of deviations: 1375241217.9999998
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | mean x: 1761000502.0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | mean y: 2354799.911392405
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | -- intersect: -15841040388.82824
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | intersect: -15841040388.82824
[2025-10-21 01:31:47] 2025-10-20 23:31:15,369 | INFO     | chi2: 0.002230411012236505
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | -- intersect: -15841040388.82824
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | current memory leak: 9.00 B/s (using 79 data points, chi2=0.00)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | could have reported an average CPU frequency of 3903 MHz (6 samples)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | ..............................
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . Timing measurements:
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . get job = 0 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . initial setup = 1 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . payload setup = 3 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . stage-in = 0 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . payload execution = 5246 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . stage-out = 0 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | . log creation = 0 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,370 | INFO     | ..............................
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | 
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | job summary report
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | --------------------------------------------------
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | PanDA job id: 6852940946
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | task id: 46771637
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | errors: (none)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | pilot state: finished 
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | transexitcode: 0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | exeerrorcode: 0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | exeerrordiag: 
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | exitcode: 0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | exitmsg: OK
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | cpuconsumptiontime: 15137 s
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | nevents: 400
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | neventsw: 0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | pid: 1926313
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | pgrp: 1926313
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | corecount: 3
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | event service: False
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | sizes: {0: 2348935, 3: 2349197, 11: 2349225, 5252: 2375894, 5253: 2384953, 5257: 2384953, 5264: 2385275}
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | --------------------------------------------------
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | 
[2025-10-21 01:31:47] 2025-10-20 23:31:15,401 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 01:31:47] 2025-10-20 23:31:15,415 | INFO     | job 6852940946 has completed (purged errors)
[2025-10-21 01:31:47] 2025-10-20 23:31:15,415 | INFO     | overall cleanup function is called
[2025-10-21 01:31:47] 2025-10-20 23:31:16,421 | INFO     | --- collectZombieJob: --- 10, [1926313]
[2025-10-21 01:31:47] 2025-10-20 23:31:16,421 | INFO     | zombie collector waiting for pid 1926313
[2025-10-21 01:31:47] 2025-10-20 23:31:16,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 01:31:47] 2025-10-20 23:31:16,422 | INFO     | collected zombie processes
[2025-10-21 01:31:47] 2025-10-20 23:31:16,422 | INFO     | will attempt to kill all subprocesses of pid=1926313
[2025-10-21 01:31:47] 2025-10-20 23:31:16,464 | INFO     | process IDs to be killed: [1926313] (in reverse order)
[2025-10-21 01:31:47] 2025-10-20 23:31:16,490 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 01:31:47] 2025-10-20 23:31:16,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 01:31:47] 2025-10-20 23:31:16,491 | INFO     | did not find any defunct processes belonging to 1926313
[2025-10-21 01:31:47] 2025-10-20 23:31:16,492 | INFO     | did not find any defunct processes belonging to 1926313
[2025-10-21 01:31:47] 2025-10-20 23:31:16,492 | INFO     | ready for new job
[2025-10-21 01:31:47] 2025-10-20 23:31:16,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 01:31:47] 2025-10-20 23:31:16,493 | INFO     | ***************************************
[2025-10-21 01:31:47] 2025-10-20 23:31:16,493 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 01:31:47] 2025-10-20 23:31:16,493 | INFO     | ***************************************
[2025-10-21 01:31:47] 2025-10-20 23:31:16,493 | INFO     | 
[2025-10-21 01:31:47] 2025-10-20 23:31:16,494 | INFO     | architecture information:
[2025-10-21 01:31:47] 2025-10-20 23:31:16,494 | INFO     | executing command: cat /etc/os-release
[2025-10-21 01:31:47] 2025-10-20 23:31:16,503 | INFO     | cat /etc/os-release:
[2025-10-21 01:31:47] NAME="CentOS Linux"
[2025-10-21 01:31:47] VERSION="7 (Core)"
[2025-10-21 01:31:47] ID="centos"
[2025-10-21 01:31:47] ID_LIKE="rhel fedora"
[2025-10-21 01:31:47] VERSION_ID="7"
[2025-10-21 01:31:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 01:31:47] ANSI_COLOR="0;31"
[2025-10-21 01:31:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 01:31:47] HOME_URL="https://www.centos.org/"
[2025-10-21 01:31:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 01:31:47] 
[2025-10-21 01:31:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 01:31:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 01:31:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 01:31:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 01:31:47] 
[2025-10-21 01:31:47] 2025-10-20 23:31:16,503 | INFO     | ***************************************
[2025-10-21 01:31:47] 2025-10-20 23:31:17,006 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 01:31:47] 2025-10-20 23:31:17,019 | INFO     | sufficient remaining disk space (275349766144 B)
[2025-10-21 01:31:47] 2025-10-20 23:31:17,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 01:31:47] 2025-10-20 23:31:17,020 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 01:31:47] 2025-10-20 23:31:17,020 | INFO     | update_server=False
[2025-10-21 01:31:47] 2025-10-20 23:31:17,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 01:31:47] 2025-10-20 23:31:17,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 01:31:47] 2025-10-20 23:31:17,323 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 01:31:47] 2025-10-20 23:31:17,323 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 01:31:47] 2025-10-20 23:31:17,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 01:31:47] 2025-10-20 23:31:17,323 | INFO     | will abort loop
[2025-10-21 01:31:47] 2025-10-20 23:31:17,553 | INFO     | all data control threads have been joined
[2025-10-21 01:31:47] 2025-10-20 23:31:17,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 01:31:47] 2025-10-20 23:31:17,939 | INFO     | all payload control threads have been joined
[2025-10-21 01:31:47] 2025-10-20 23:31:18,021 | INFO     | [job] queue monitor thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,025 | INFO     | [job] retrieve thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,329 | INFO     | [job] job monitor thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,345 | INFO     | all job control threads have been joined
[2025-10-21 01:31:47] 2025-10-20 23:31:18,546 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,559 | INFO     | [data] control thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 01:31:47] 2025-10-20 23:31:18,744 | INFO     | [data] copytool_in thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,896 | INFO     | [payload] failed_post thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,945 | INFO     | [payload] control thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:18,971 | INFO     | [job] validate thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:19,029 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:19,088 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:19,351 | INFO     | [job] control thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:19,493 | INFO     | [payload] validate_post thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:19,752 | INFO     | [data] copytool_out thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:22,689 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:23,215 | INFO     | [monitor] cgroup control has ended
[2025-10-21 01:31:47] 2025-10-20 23:31:27,191 | INFO     | job.realtimelogging is not enabled
[2025-10-21 01:31:47] 2025-10-20 23:31:28,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 01:31:47] 2025-10-20 23:31:28,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567128217408)>', '<ExcThread(monitor, started 140566310393600)>']
[2025-10-21 01:31:47] 2025-10-20 23:31:33,852 | INFO     | all workflow threads have been joined
[2025-10-21 01:31:47] 2025-10-20 23:31:33,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 01:31:47] 2025-10-20 23:31:33,852 | INFO     | traces error code: 0
[2025-10-21 01:31:47] 2025-10-20 23:31:33,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 01:31:47] 2025-10-20 23:31:47,540 | INFO     | PID=1919854 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 01:31:47] 2025-10-20 23:31:47,541 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 01:31:47] 2025-10-20 23:31:47,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 01:31:47] 2025-10-20 23:31:47,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 01:31:47] 2025-10-20 23:31:47,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 01:31:47] 2025-10-20 23:31:47,541 | CRITICAL | thread 'MainThread' is not alive
[2025-10-21 01:31:47] 2025-10-20 23:31:47,541 | INFO     | [monitor] control thread has ended
[2025-10-21 01:31:47] 2025-10-20 23:31:47,588 [wrapper] ==== pilot stdout END ====
[2025-10-21 01:31:47] 2025-10-20 23:31:47,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 01:31:47] 2025-10-20 23:31:47,593 [wrapper] pilotpid: 1919854
[2025-10-21 01:31:47] 2025-10-20 23:31:47,596 [wrapper] Pilot exit status: 0
[2025-10-21 01:31:47] 2025-10-20 23:31:47,603 [wrapper] pandaids: 6852940946
[2025-10-21 01:31:47] 2025-10-20 23:31:47,621 [wrapper] cleanup supervisor_pilot 1939237 1919855
[2025-10-21 01:31:47] 2025-10-20 23:31:47,623 [wrapper] Test setup, not cleaning
[2025-10-21 01:31:47] 2025-10-20 23:31:47,626 [wrapper] apfmon messages muted
[2025-10-21 01:31:47] 2025-10-20 23:31:47,628 [wrapper] ==== wrapper stdout END ====
[2025-10-21 01:31:47] 2025-10-20 23:31:47,631 [wrapper] ==== wrapper stderr END ====
[2025-10-21 01:31:47]  *** Error codes and diagnostics ***
[2025-10-21 01:31:47]     "exeErrorCode": 0,
[2025-10-21 01:31:47]     "exeErrorDiag": "",
[2025-10-21 01:31:47]     "pilotErrorCode": 0,
[2025-10-21 01:31:47]     "pilotErrorDiag": "",
[2025-10-21 01:31:47]  *** Listing of results directory ***
[2025-10-21 01:31:47] total 432676
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc      5112 Oct 20 23:28 queuedata.json
[2025-10-21 01:31:47] -rwx------ 1 boinc boinc     36292 Oct 20 23:31 runpilot2-wrapper.sh
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc       100 Oct 21 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 01:31:47] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 00:03 run_atlas
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc       105 Oct 21 00:03 job.xml
[2025-10-21 01:31:47] -rw-r--r-- 2 boinc boinc 229828203 Oct 21 00:03 EVNT.46771634._002046.pool.root.1
[2025-10-21 01:31:47] -rw-r--r-- 2 boinc boinc    569688 Oct 21 00:03 input.tar.gz
[2025-10-21 01:31:47] -rw-r--r-- 2 boinc boinc     15120 Oct 21 00:03 start_atlas.sh
[2025-10-21 01:31:47] drwxrwx--x 2 boinc boinc      4096 Oct 21 00:03 shared
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc         0 Oct 21 00:03 boinc_setup_complete
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc      6447 Oct 21 00:03 init_data.xml
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc         0 Oct 21 00:03 boinc_lockfile
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc      2561 Oct 21 00:03 pandaJob.out
[2025-10-21 01:31:47] -rw------- 1 boinc boinc    978846 Oct 21 00:03 agis_schedconf.cvmfs.json
[2025-10-21 01:31:47] -rw------- 1 boinc boinc   1560740 Oct 21 00:03 agis_ddmendpoints.agis.ALL.json
[2025-10-21 01:31:47] drwx------ 5 boinc boinc      4096 Oct 21 00:03 pilot3
[2025-10-21 01:31:47] -rw------- 1 boinc boinc 207281624 Oct 21 01:30 HITS.46771637._051068.pool.root.1
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc       529 Oct 21 01:30 boinc_task_state.xml
[2025-10-21 01:31:47] -rw------- 1 boinc boinc      1014 Oct 21 01:31 memory_monitor_summary.json
[2025-10-21 01:31:47] -rw------- 1 boinc boinc    250916 Oct 21 01:31 log.46771637._051068.job.log.tgz.1
[2025-10-21 01:31:47] -rw------- 1 boinc boinc      7745 Oct 21 01:31 heartbeat.json
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc        27 Oct 21 01:31 wrapper_checkpoint.txt
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc      8192 Oct 21 01:31 boinc_mmap_file
[2025-10-21 01:31:47] -rw------- 1 boinc boinc        95 Oct 21 01:31 pilot_heartbeat.json
[2025-10-21 01:31:47] -rw------- 1 boinc boinc       817 Oct 21 01:31 pilotlog.txt
[2025-10-21 01:31:47] -rw------- 1 boinc boinc    772141 Oct 21 01:31 log.46771637._051068.job.log.1
[2025-10-21 01:31:47] -rw------- 1 boinc boinc       357 Oct 21 01:31 output.list
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc       620 Oct 21 01:31 runtime_log
[2025-10-21 01:31:47] -rw------- 1 boinc boinc   1044480 Oct 21 01:31 result.tar.gz
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc      8777 Oct 21 01:31 runtime_log.err
[2025-10-21 01:31:47] -rw------- 1 boinc boinc       658 Oct 21 01:31 7bgNDmleCV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHTzNDmsUBaSm.diag
[2025-10-21 01:31:47] -rw-r--r-- 1 boinc boinc     22299 Oct 21 01:31 stderr.txt
[2025-10-21 01:31:47] HITS file was successfully produced:
[2025-10-21 01:31:47] -rw------- 1 boinc boinc 207281624 Oct 21 01:30 shared/HITS.pool.root.1
[2025-10-21 01:31:47]  *** Contents of shared directory: ***
[2025-10-21 01:31:47] total 428472
[2025-10-21 01:31:47] -rw-r--r-- 2 boinc boinc 229828203 Oct 21 00:03 ATLAS.root_0
[2025-10-21 01:31:47] -rw-r--r-- 2 boinc boinc    569688 Oct 21 00:03 input.tar.gz
[2025-10-21 01:31:47] -rw-r--r-- 2 boinc boinc     15120 Oct 21 00:03 start_atlas.sh
[2025-10-21 01:31:47] -rw------- 1 boinc boinc 207281624 Oct 21 01:30 HITS.pool.root.1
[2025-10-21 01:31:47] -rw------- 1 boinc boinc   1044480 Oct 21 01:31 result.tar.gz
01:31:49 (1915589): run_atlas exited; CPU time 15156.214712
01:31:49 (1915589): called boinc_finish(0)

</stderr_txt>
]]>

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