Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:44 (1377125): wrapper (7.7.26015): starting
18:37:44 (1377125): wrapper: running run_atlas (--nthreads 8)
[2025-10-20 18:37:44] Arguments: --nthreads 8
[2025-10-20 18:37:44] Threads: 8
[2025-10-20 18:37:44] Checking for CVMFS
[2025-10-20 18:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 18:37:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 18:37:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 18:37:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 18:37:49] 2.13.2.0 1448902 141390 755196 151938 3 268 17198033 21551105 22034 16776704 0 109046914 99.473 144964339 28674 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-20 18:37:49] CVMFS is ok
[2025-10-20 18:37:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 18:37:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 18:37:49] Further information can be found at the LHC@home message board.
[2025-10-20 18:37:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 18:37:49] Checking for apptainer binary...
[2025-10-20 18:37:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 18:37:49] Running /usr/bin/apptainer --version
[2025-10-20 18:37:49] apptainer version 1.4.3-1.el9
[2025-10-20 18:37:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 18:37:51] c-16-30.aglt2.org
[2025-10-20 18:37:51] apptainer works
[2025-10-20 18:37:51] Set ATHENA_PROC_NUMBER=8
[2025-10-20 18:37:51] Set ATHENA_CORE_NUMBER=8
[2025-10-20 18:37:52] Starting ATLAS job with PandaID=6852938653
[2025-10-20 18:37:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 12:26:15]  *** The last 200 lines of the pilot log: ***
[2025-10-21 12:26:15] 2025-10-21 16:25:33,324 | INFO     | monitor loop #2981: job 0:6852938653 is in state 'finished'
[2025-10-21 12:26:15] 2025-10-21 16:25:33,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 12:26:15] 2025-10-21 16:25:34,630 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-21 12:26:15] 2025-10-21 16:25:34,709 | INFO     | time since job start (63942s) is within the limit (172800.0s)
[2025-10-21 12:26:15] 2025-10-21 16:25:34,763 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9948999999997
[2025-10-21 12:26:15] 2025-10-21 16:25:34,882 | INFO     | using path: /var/lib/condor/boinchome/slots/1/PanDA_Pilot-6852938653/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 12:26:15] 2025-10-21 16:25:34,883 | INFO     | extracted standard info from prmon json
[2025-10-21 12:26:15] 2025-10-21 16:25:34,883 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 12:26:15] 2025-10-21 16:25:34,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 12:26:15] 2025-10-21 16:25:34,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 12:26:15] 2025-10-21 16:25:34,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 12:26:15] 2025-10-21 16:25:35,219 | INFO     | fitting pss+swap vs Time
[2025-10-21 12:26:15] 2025-10-21 16:25:35,221 | INFO     | sum of square deviations: 352861879160.3178
[2025-10-21 12:26:15] 2025-10-21 16:25:35,266 | INFO     | sum of deviations: 1735558861358.199
[2025-10-21 12:26:15] 2025-10-21 16:25:35,266 | INFO     | mean x: 1761032060.8371646
[2025-10-21 12:26:15] 2025-10-21 16:25:35,266 | INFO     | mean y: 2052296.2835249042
[2025-10-21 12:26:15] 2025-10-21 16:25:35,266 | INFO     | -- intersect: -8659622366.887474
[2025-10-21 12:26:15] 2025-10-21 16:25:35,266 | INFO     | intersect: -8659622366.887474
[2025-10-21 12:26:15] 2025-10-21 16:25:35,268 | INFO     | chi2: 6.818764606567302
[2025-10-21 12:26:15] 2025-10-21 16:25:35,270 | INFO     | sum of square deviations: 347816918744.0214
[2025-10-21 12:26:15] 2025-10-21 16:25:35,302 | INFO     | sum of deviations: 1779972139064.4602
[2025-10-21 12:26:15] 2025-10-21 16:25:35,302 | INFO     | mean x: 1761031908.342637
[2025-10-21 12:26:15] 2025-10-21 16:25:35,302 | INFO     | mean y: 2053631.8835418671
[2025-10-21 12:26:15] 2025-10-21 16:25:35,302 | INFO     | -- intersect: -9010123648.544662
[2025-10-21 12:26:15] 2025-10-21 16:25:35,302 | INFO     | intersect: -9010123648.544662
[2025-10-21 12:26:15] 2025-10-21 16:25:35,304 | INFO     | chi2: 6.1371858251984674
[2025-10-21 12:26:15] 2025-10-21 16:25:35,304 | INFO     | current chi2=6.1371858251984674 (change=9.995634410262397 %)
[2025-10-21 12:26:15] 2025-10-21 16:25:35,304 | INFO     | right removable region: 1038
[2025-10-21 12:26:15] 2025-10-21 16:25:35,306 | INFO     | sum of square deviations: 347816258115.6988
[2025-10-21 12:26:15] 2025-10-21 16:25:35,362 | INFO     | sum of deviations: 1497201890496.88
[2025-10-21 12:26:15] 2025-10-21 16:25:35,362 | INFO     | mean x: 1761032213.3416748
[2025-10-21 12:26:15] 2025-10-21 16:25:35,362 | INFO     | mean y: 2059496.552454283
[2025-10-21 12:26:15] 2025-10-21 16:25:35,363 | INFO     | -- intersect: -7578439394.801859
[2025-10-21 12:26:15] 2025-10-21 16:25:35,363 | INFO     | intersect: -7578439394.801859
[2025-10-21 12:26:15] 2025-10-21 16:25:35,364 | INFO     | chi2: 4.0834461185718265
[2025-10-21 12:26:15] 2025-10-21 16:25:35,365 | INFO     | current chi2=4.0834461185718265 (change=40.11457567197774 %)
[2025-10-21 12:26:15] 2025-10-21 16:25:35,366 | INFO     | sum of square deviations: 342818963558.5505
[2025-10-21 12:26:15] 2025-10-21 16:25:35,398 | INFO     | sum of deviations: 1345311351662.9717
[2025-10-21 12:26:15] 2025-10-21 16:25:35,398 | INFO     | mean x: 1761032365.8462281
[2025-10-21 12:26:15] 2025-10-21 16:25:35,399 | INFO     | mean y: 2064130.3771760154
[2025-10-21 12:26:15] 2025-10-21 16:25:35,399 | INFO     | -- intersect: -6908687853.196224
[2025-10-21 12:26:15] 2025-10-21 16:25:35,399 | INFO     | intersect: -6908687853.196224
[2025-10-21 12:26:15] 2025-10-21 16:25:35,400 | INFO     | chi2: 3.118775249292903
[2025-10-21 12:26:15] 2025-10-21 16:25:35,401 | INFO     | current chi2=3.118775249292903 (change=23.623940203141807 %)
[2025-10-21 12:26:15] 2025-10-21 16:25:35,401 | INFO     | left removable region: 20
[2025-10-21 12:26:15] 2025-10-21 16:25:35,402 | INFO     | sum of square deviations: 327150595468.193
[2025-10-21 12:26:15] 2025-10-21 16:25:35,434 | INFO     | sum of deviations: 1224296566257.2817
[2025-10-21 12:26:15] 2025-10-21 16:25:35,434 | INFO     | mean x: 1761032487.8605108
[2025-10-21 12:26:15] 2025-10-21 16:25:35,434 | INFO     | mean y: 2070522.4174852653
[2025-10-21 12:26:15] 2025-10-21 16:25:35,434 | INFO     | -- intersect: -6588246162.990351
[2025-10-21 12:26:15] 2025-10-21 16:25:35,434 | INFO     | intersect: -6588246162.990351
[2025-10-21 12:26:15] 2025-10-21 16:25:35,436 | INFO     | chi2: 1.972326789237371
[2025-10-21 12:26:15] 2025-10-21 16:25:35,445 | INFO     | -- intersect: -6588246162.990351
[2025-10-21 12:26:15] 2025-10-21 16:25:35,445 | INFO     | current memory leak: 3.74 B/s (using 1018 data points, chi2=1.97)
[2025-10-21 12:26:15] 2025-10-21 16:25:35,446 | INFO     | could have reported an average CPU frequency of 2899 MHz (38 samples)
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | ..............................
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | . Timing measurements:
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | . get job = 0 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | . initial setup = 11 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | . payload setup = 77 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | . stage-in = 0 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,447 | INFO     | . payload execution = 63700 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,448 | INFO     | . stage-out = 14 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,448 | INFO     | . log creation = 0 s
[2025-10-21 12:26:15] 2025-10-21 16:25:35,448 | INFO     | ..............................
[2025-10-21 12:26:15] 2025-10-21 16:25:36,537 | INFO     | 
[2025-10-21 12:26:15] 2025-10-21 16:25:36,537 | INFO     | job summary report
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | --------------------------------------------------
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | PanDA job id: 6852938653
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | task id: 46771637
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | errors: (none)
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | pilot state: finished 
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | transexitcode: 0
[2025-10-21 12:26:15] 2025-10-21 16:25:36,538 | INFO     | exeerrorcode: 0
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | exeerrordiag: 
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | exitcode: 0
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | exitmsg: OK
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | cpuconsumptiontime: 82691 s
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | nevents: 400
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | neventsw: 0
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | pid: 1405688
[2025-10-21 12:26:15] 2025-10-21 16:25:36,539 | INFO     | pgrp: 1405688
[2025-10-21 12:26:15] 2025-10-21 16:25:36,540 | INFO     | corecount: 8
[2025-10-21 12:26:15] 2025-10-21 16:25:36,540 | INFO     | event service: False
[2025-10-21 12:26:15] 2025-10-21 16:25:36,540 | INFO     | sizes: {0: 2348052, 1: 2348664, 2: 2348748, 4: 2348804, 5: 2349003, 6: 2349031, 17: 2349187, 30: 2349215, 41: 2349243, 53: 2349271, 56: 2349561, 64: 2349869, 63781
[2025-10-21 12:26:15] 2025-10-21 16:25:36,540 | INFO     | --------------------------------------------------
[2025-10-21 12:26:15] 2025-10-21 16:25:36,540 | INFO     | 
[2025-10-21 12:26:15] 2025-10-21 16:25:36,540 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/1
[2025-10-21 12:26:15] 2025-10-21 16:25:36,721 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 12:26:15] 2025-10-21 16:25:36,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 12:26:15] 2025-10-21 16:25:36,725 | INFO     | job 6852938653 has completed (purged errors)
[2025-10-21 12:26:15] 2025-10-21 16:25:36,725 | INFO     | overall cleanup function is called
[2025-10-21 12:26:15] 2025-10-21 16:25:37,734 | INFO     | --- collectZombieJob: --- 10, [1405688]
[2025-10-21 12:26:15] 2025-10-21 16:25:37,734 | INFO     | zombie collector waiting for pid 1405688
[2025-10-21 12:26:15] 2025-10-21 16:25:37,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 12:26:15] 2025-10-21 16:25:37,735 | INFO     | collected zombie processes
[2025-10-21 12:26:15] 2025-10-21 16:25:37,735 | INFO     | will attempt to kill all subprocesses of pid=1405688
[2025-10-21 12:26:15] 2025-10-21 16:25:39,024 | INFO     | process IDs to be killed: [1405688] (in reverse order)
[2025-10-21 12:26:15] 2025-10-21 16:25:39,206 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 12:26:15] 2025-10-21 16:25:39,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 12:26:15] 2025-10-21 16:25:39,353 | INFO     | did not find any defunct processes belonging to 1405688
[2025-10-21 12:26:15] 2025-10-21 16:25:39,497 | INFO     | did not find any defunct processes belonging to 1405688
[2025-10-21 12:26:15] 2025-10-21 16:25:39,497 | INFO     | ready for new job
[2025-10-21 12:26:15] 2025-10-21 16:25:39,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 12:26:15] 2025-10-21 16:25:39,514 | INFO     | ***************************************
[2025-10-21 12:26:15] 2025-10-21 16:25:39,514 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 12:26:15] 2025-10-21 16:25:39,514 | INFO     | ***************************************
[2025-10-21 12:26:15] 2025-10-21 16:25:39,515 | INFO     | 
[2025-10-21 12:26:15] 2025-10-21 16:25:39,544 | INFO     | architecture information:
[2025-10-21 12:26:15] 2025-10-21 16:25:39,566 | INFO     | executing command: cat /etc/os-release
[2025-10-21 12:26:15] 2025-10-21 16:25:39,731 | INFO     | cat /etc/os-release:
[2025-10-21 12:26:15] NAME="CentOS Linux"
[2025-10-21 12:26:15] VERSION="7 (Core)"
[2025-10-21 12:26:15] ID="centos"
[2025-10-21 12:26:15] ID_LIKE="rhel fedora"
[2025-10-21 12:26:15] VERSION_ID="7"
[2025-10-21 12:26:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 12:26:15] ANSI_COLOR="0;31"
[2025-10-21 12:26:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 12:26:15] HOME_URL="https://www.centos.org/"
[2025-10-21 12:26:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 12:26:15] 
[2025-10-21 12:26:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 12:26:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 12:26:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 12:26:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 12:26:15] 
[2025-10-21 12:26:15] 2025-10-21 16:25:39,732 | INFO     | ***************************************
[2025-10-21 12:26:15] 2025-10-21 16:25:40,236 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/1
[2025-10-21 12:26:15] 2025-10-21 16:25:40,347 | INFO     | sufficient remaining disk space (1827162554368 B)
[2025-10-21 12:26:15] 2025-10-21 16:25:40,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 12:26:15] 2025-10-21 16:25:40,347 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 12:26:15] 2025-10-21 16:25:40,347 | INFO     | update_server=False
[2025-10-21 12:26:15] 2025-10-21 16:25:40,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 12:26:15] 2025-10-21 16:25:40,349 | INFO     | all data control threads have been joined
[2025-10-21 12:26:15] 2025-10-21 16:25:40,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 12:26:15] 2025-10-21 16:25:40,352 | INFO     | aborting loop
[2025-10-21 12:26:15] 2025-10-21 16:25:40,519 | INFO     | all job control threads have been joined
[2025-10-21 12:26:15] 2025-10-21 16:25:40,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 12:26:15] 2025-10-21 16:25:41,353 | INFO     | [job] retrieve thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:41,354 | INFO     | [data] control thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:41,367 | INFO     | [job] job monitor thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:41,497 | INFO     | [payload] validate_post thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:41,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 12:26:15] 2025-10-21 16:25:41,514 | INFO     | all payload control threads have been joined
[2025-10-21 12:26:15] 2025-10-21 16:25:41,527 | INFO     | [job] control thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:41,609 | INFO     | [job] validate thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:41,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,277 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,380 | INFO     | [payload] failed_post thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,426 | INFO     | [data] copytool_in thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,491 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,511 | INFO     | [job] queue monitor thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,520 | INFO     | [payload] control thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,777 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:42,819 | INFO     | [data] copytool_out thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:25:43,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 12:26:15] 2025-10-21 16:25:47,475 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 12:26:15] 2025-10-21 16:26:08,235 | INFO     | [monitor] cgroup control has ended
[2025-10-21 12:26:15] 2025-10-21 16:26:08,461 | INFO     | PID=1387589 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 12:26:15] 2025-10-21 16:26:08,461 | INFO     | .. there are 21 such processes running
[2025-10-21 12:26:15] 2025-10-21 16:26:08,462 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 12:26:15] 2025-10-21 16:26:08,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 12:26:15] 2025-10-21 16:26:08,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 12:26:15] 2025-10-21 16:26:09,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479527487296)>', '<ExcThread(monitor, started 140479052117760)>']
[2025-10-21 12:26:15] 2025-10-21 16:26:10,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 12:26:15] 2025-10-21 16:26:10,479 | INFO     | [monitor] control thread has ended
[2025-10-21 12:26:15] 2025-10-21 16:26:14,630 | INFO     | all workflow threads have been joined
[2025-10-21 12:26:15] 2025-10-21 16:26:14,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 12:26:15] 2025-10-21 16:26:14,631 | INFO     | traces error code: 0
[2025-10-21 12:26:15] 2025-10-21 16:26:14,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 12:26:15] 2025-10-21 16:26:14,801 [wrapper] ==== pilot stdout END ====
[2025-10-21 12:26:15] 2025-10-21 16:26:14,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 12:26:15] 2025-10-21 16:26:14,808 [wrapper] pilotpid: 1387589
[2025-10-21 12:26:15] 2025-10-21 16:26:14,811 [wrapper] Pilot exit status: 0
[2025-10-21 12:26:15] 2025-10-21 16:26:14,849 [wrapper] pandaids: 6852938653
[2025-10-21 12:26:15] 2025-10-21 16:26:15,009 [wrapper] cleanup supervisor_pilot 4158949 1387590
[2025-10-21 12:26:15] 2025-10-21 16:26:15,068 [wrapper] Test setup, not cleaning
[2025-10-21 12:26:15] 2025-10-21 16:26:15,104 [wrapper] apfmon messages muted
[2025-10-21 12:26:15] 2025-10-21 16:26:15,122 [wrapper] ==== wrapper stdout END ====
[2025-10-21 12:26:15] 2025-10-21 16:26:15,126 [wrapper] ==== wrapper stderr END ====
[2025-10-21 12:26:15]  *** Error codes and diagnostics ***
[2025-10-21 12:26:15]     "exeErrorCode": 0,
[2025-10-21 12:26:15]     "exeErrorDiag": "",
[2025-10-21 12:26:15]     "pilotErrorCode": 0,
[2025-10-21 12:26:15]     "pilotErrorDiag": "",
[2025-10-21 12:26:15]  *** Listing of results directory ***
[2025-10-21 12:26:15] total 445256
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 16:52 pilot3.tar.gz
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 17:19 queuedata.json
[2025-10-21 12:26:15] -rwx------. 1 boincer umatlas     36292 Oct 20 17:20 runpilot2-wrapper.sh
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas       100 Oct 20 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 12:26:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 18:37 run_atlas
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas       105 Oct 20 18:37 job.xml
[2025-10-21 12:26:15] -rw-r--r--. 2 boincer umatlas 228303454 Oct 20 18:37 EVNT.46771634._000458.pool.root.1
[2025-10-21 12:26:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 18:37 start_atlas.sh
[2025-10-21 12:26:15] drwxrwx--x. 2 boincer umatlas        68 Oct 20 18:37 shared
[2025-10-21 12:26:15] -rw-r--r--. 2 boincer umatlas    569679 Oct 20 18:37 input.tar.gz
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas         0 Oct 20 18:37 boinc_lockfile
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas      2560 Oct 20 18:37 pandaJob.out
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas    978846 Oct 20 18:39 agis_schedconf.cvmfs.json
[2025-10-21 12:26:15] drwx------. 5 boincer umatlas      4096 Oct 20 18:39 pilot3
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas      6550 Oct 21 12:22 init_data.xml
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas 208133464 Oct 21 12:24 HITS.46771637._049804.pool.root.1
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas       531 Oct 21 12:24 boinc_task_state.xml
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas      1037 Oct 21 12:24 memory_monitor_summary.json
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas   1560740 Oct 21 12:25 agis_ddmendpoints.agis.ALL.json
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas   1021039 Oct 21 12:25 log.46771637._049804.job.log.tgz.1
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas      7820 Oct 21 12:25 heartbeat.json
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas        95 Oct 21 12:26 pilot_heartbeat.json
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 12:26 boinc_mmap_file
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas        28 Oct 21 12:26 wrapper_checkpoint.txt
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas      4837 Oct 21 12:26 pilotlog.txt
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas   6782072 Oct 21 12:26 log.46771637._049804.job.log.1
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas       357 Oct 21 12:26 output.list
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas       620 Oct 21 12:26 runtime_log
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas   7823360 Oct 21 12:26 result.tar.gz
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas      8853 Oct 21 12:26 runtime_log.err
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas       658 Oct 21 12:26 O3mMDmXTCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxgdMDmTeyASm.diag
[2025-10-21 12:26:15] -rw-r--r--. 1 boincer umatlas     21300 Oct 21 12:26 stderr.txt
[2025-10-21 12:26:15] HITS file was successfully produced:
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas 208133464 Oct 21 12:24 shared/HITS.pool.root.1
[2025-10-21 12:26:15]  *** Contents of shared directory: ***
[2025-10-21 12:26:15] total 434432
[2025-10-21 12:26:15] -rw-r--r--. 2 boincer umatlas 228303454 Oct 20 18:37 ATLAS.root_0
[2025-10-21 12:26:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 18:37 start_atlas.sh
[2025-10-21 12:26:15] -rw-r--r--. 2 boincer umatlas    569679 Oct 20 18:37 input.tar.gz
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas 208133464 Oct 21 12:24 HITS.pool.root.1
[2025-10-21 12:26:15] -rw-------. 1 boincer umatlas   7823360 Oct 21 12:26 result.tar.gz
12:26:17 (1377125): run_atlas exited; CPU time 85435.914369
12:26:17 (1377125): called boinc_finish(0)

</stderr_txt>
]]>

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