Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:07:37 (1785): wrapper (7.7.26015): starting
06:07:37 (1785): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 06:07:37] Arguments: --nthreads 8
[2025-10-21 06:07:37] Threads: 8
[2025-10-21 06:07:37] Checking for CVMFS
[2025-10-21 06:07:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 06:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 06:07:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 06:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 06:07:40] 2.11.2.0 28123 233064 137916 151945 1 60 24207300 25165825 4632 130560 0 109859036 99.875 70829936 4124 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-21 06:07:40] CVMFS is ok
[2025-10-21 06:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 06:07:40] Checking for apptainer binary...
[2025-10-21 06:07:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 06:07:40] Running /usr/bin/apptainer --version
[2025-10-21 06:07:40] apptainer version 1.3.2-1.el7
[2025-10-21 06:07:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 06:07:46] cg-vwn217.simple-grid.lan
[2025-10-21 06:07:46] apptainer works
[2025-10-21 06:07:46] Set ATHENA_PROC_NUMBER=8
[2025-10-21 06:07:46] Set ATHENA_CORE_NUMBER=8
[2025-10-21 06:07:47] Starting ATLAS job with PandaID=6852937345
[2025-10-21 06:07:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 10:40:23]  *** The last 200 lines of the pilot log: ***
[2025-10-21 10:40:23] 2025-10-21 08:39:45,695 | INFO     | fitting pss+swap vs Time
[2025-10-21 10:40:23] 2025-10-21 08:39:45,696 | INFO     | sum of square deviations: 5141528960.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,699 | INFO     | sum of deviations: 37555413842.000046
[2025-10-21 10:40:23] 2025-10-21 08:39:45,699 | INFO     | mean x: 1761028100.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,699 | INFO     | mean y: 2481013.2705882355
[2025-10-21 10:40:23] 2025-10-21 08:39:45,699 | INFO     | -- intersect: -12860645810.951567
[2025-10-21 10:40:23] 2025-10-21 08:39:45,699 | INFO     | intersect: -12860645810.951567
[2025-10-21 10:40:23] 2025-10-21 08:39:45,700 | INFO     | chi2: 6.5476143692475315
[2025-10-21 10:40:23] 2025-10-21 08:39:45,700 | INFO     | sum of square deviations: 4844974562.5
[2025-10-21 10:40:23] 2025-10-21 08:39:45,702 | INFO     | sum of deviations: 53999152731.999954
[2025-10-21 10:40:23] 2025-10-21 08:39:45,702 | INFO     | mean x: 1761027947.5
[2025-10-21 10:40:23] 2025-10-21 08:39:45,703 | INFO     | mean y: 2489331.2
[2025-10-21 10:40:23] 2025-10-21 08:39:45,703 | INFO     | -- intersect: -19624861829.40228
[2025-10-21 10:40:23] 2025-10-21 08:39:45,703 | INFO     | intersect: -19624861829.40228
[2025-10-21 10:40:23] 2025-10-21 08:39:45,703 | INFO     | chi2: 5.830928437546899
[2025-10-21 10:40:23] 2025-10-21 08:39:45,703 | INFO     | current chi2=5.830928437546899 (change=10.945756595970627 %)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,703 | INFO     | right removable region: 249
[2025-10-21 10:40:23] 2025-10-21 08:39:45,704 | INFO     | sum of square deviations: 4844974562.5
[2025-10-21 10:40:23] 2025-10-21 08:39:45,706 | INFO     | sum of deviations: -51432593408.999985
[2025-10-21 10:40:23] 2025-10-21 08:39:45,706 | INFO     | mean x: 1761028252.5
[2025-10-21 10:40:23] 2025-10-21 08:39:45,706 | INFO     | mean y: 2526734.632
[2025-10-21 10:40:23] 2025-10-21 08:39:45,706 | INFO     | -- intersect: 18697000549.548805
[2025-10-21 10:40:23] 2025-10-21 08:39:45,706 | INFO     | intersect: 18697000549.548805
[2025-10-21 10:40:23] 2025-10-21 08:39:45,707 | INFO     | chi2: 1.8415240794269252
[2025-10-21 10:40:23] 2025-10-21 08:39:45,707 | INFO     | current chi2=1.8415240794269252 (change=71.87488487293795 %)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,707 | INFO     | sum of square deviations: 4560048290.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,714 | INFO     | sum of deviations: -81587954267.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,715 | INFO     | mean x: 1761028405.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,715 | INFO     | mean y: 2542747.9142857143
[2025-10-21 10:40:23] 2025-10-21 08:39:45,715 | INFO     | -- intersect: 31510697011.348186
[2025-10-21 10:40:23] 2025-10-21 08:39:45,715 | INFO     | intersect: 31510697011.348186
[2025-10-21 10:40:23] 2025-10-21 08:39:45,715 | INFO     | chi2: 1.020861046475378
[2025-10-21 10:40:23] 2025-10-21 08:39:45,716 | INFO     | current chi2=1.020861046475378 (change=44.56433896899867 %)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,716 | INFO     | sum of square deviations: 4286517580.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,718 | INFO     | sum of deviations: -77493130620.49997
[2025-10-21 10:40:23] 2025-10-21 08:39:45,718 | INFO     | mean x: 1761028557.5
[2025-10-21 10:40:23] 2025-10-21 08:39:45,718 | INFO     | mean y: 2540442.6458333335
[2025-10-21 10:40:23] 2025-10-21 08:39:45,718 | INFO     | -- intersect: 31839016903.049885
[2025-10-21 10:40:23] 2025-10-21 08:39:45,719 | INFO     | intersect: 31839016903.049885
[2025-10-21 10:40:23] 2025-10-21 08:39:45,719 | INFO     | chi2: 1.0109725890398569
[2025-10-21 10:40:23] 2025-10-21 08:39:45,719 | INFO     | current chi2=1.0109725890398569 (change=0.968638921982771 %)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,719 | INFO     | left removable region: 30
[2025-10-21 10:40:23] 2025-10-21 08:39:45,720 | INFO     | sum of square deviations: 3256879670.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,721 | INFO     | sum of deviations: -38014720539.99999
[2025-10-21 10:40:23] 2025-10-21 08:39:45,721 | INFO     | mean x: 1761028832.0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,722 | INFO     | mean y: 2536948.694063927
[2025-10-21 10:40:23] 2025-10-21 08:39:45,722 | INFO     | -- intersect: 20557493132.065308
[2025-10-21 10:40:23] 2025-10-21 08:39:45,722 | INFO     | intersect: 20557493132.065308
[2025-10-21 10:40:23] 2025-10-21 08:39:45,722 | INFO     | chi2: 0.19220116682121002
[2025-10-21 10:40:23] 2025-10-21 08:39:45,722 | INFO     | -- intersect: 20557493132.065308
[2025-10-21 10:40:23] 2025-10-21 08:39:45,722 | INFO     | current memory leak: -11.67 B/s (using 219 data points, chi2=0.19)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,723 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,723 | INFO     | ..............................
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . Timing measurements:
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . get job = 0 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . initial setup = 6 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . payload setup = 121 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . stage-in = 0 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . payload execution = 15686 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . stage-out = 3 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | . log creation = 1 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,724 | INFO     | ..............................
[2025-10-21 10:40:23] 2025-10-21 08:39:45,888 | INFO     | 
[2025-10-21 10:40:23] 2025-10-21 08:39:45,888 | INFO     | job summary report
[2025-10-21 10:40:23] 2025-10-21 08:39:45,888 | INFO     | --------------------------------------------------
[2025-10-21 10:40:23] 2025-10-21 08:39:45,888 | INFO     | PanDA job id: 6852937345
[2025-10-21 10:40:23] 2025-10-21 08:39:45,888 | INFO     | task id: 46771637
[2025-10-21 10:40:23] 2025-10-21 08:39:45,888 | INFO     | errors: (none)
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | pilot state: finished 
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | transexitcode: 0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | exeerrorcode: 0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | exeerrordiag: 
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | exitcode: 0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | exitmsg: OK
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | cpuconsumptiontime: 59483 s
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | nevents: 400
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | neventsw: 0
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | pid: 12131
[2025-10-21 10:40:23] 2025-10-21 08:39:45,889 | INFO     | pgrp: 12131
[2025-10-21 10:40:23] 2025-10-21 08:39:45,890 | INFO     | corecount: 8
[2025-10-21 10:40:23] 2025-10-21 08:39:45,890 | INFO     | event service: False
[2025-10-21 10:40:23] 2025-10-21 08:39:45,890 | INFO     | sizes: {0: 2348712, 1: 2348911, 12: 2348911, 23: 2348939, 33: 2348967, 44: 2349023, 55: 2349179, 66: 2349207, 76: 2349235, 87: 2349291, 93: 2349581, 98: 2349889, 1
[2025-10-21 10:40:23] 2025-10-21 08:39:45,890 | INFO     | --------------------------------------------------
[2025-10-21 10:40:23] 2025-10-21 08:39:45,890 | INFO     | 
[2025-10-21 10:40:23] 2025-10-21 08:39:45,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-10-21 10:40:23] 2025-10-21 08:39:46,144 | INFO     | time since job start (16098s) is within the limit (172800.0s)
[2025-10-21 10:40:23] 2025-10-21 08:39:46,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 10:40:23] 2025-10-21 08:39:46,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,149 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 10:40:23] 2025-10-21 08:39:46,149 | INFO     | job 6852937345 has completed (purged errors)
[2025-10-21 10:40:23] 2025-10-21 08:39:46,149 | INFO     | overall cleanup function is called
[2025-10-21 10:40:23] 2025-10-21 08:39:47,159 | INFO     | --- collectZombieJob: --- 10, [12131]
[2025-10-21 10:40:23] 2025-10-21 08:39:47,160 | INFO     | zombie collector waiting for pid 12131
[2025-10-21 10:40:23] 2025-10-21 08:39:47,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 10:40:23] 2025-10-21 08:39:47,160 | INFO     | collected zombie processes
[2025-10-21 10:40:23] 2025-10-21 08:39:47,160 | INFO     | will attempt to kill all subprocesses of pid=12131
[2025-10-21 10:40:23] 2025-10-21 08:39:47,271 | INFO     | process IDs to be killed: [12131] (in reverse order)
[2025-10-21 10:40:23] 2025-10-21 08:39:48,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 10:40:23] 2025-10-21 08:39:48,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 10:40:23] 2025-10-21 08:39:48,110 | INFO     | did not find any defunct processes belonging to 12131
[2025-10-21 10:40:23] 2025-10-21 08:39:48,113 | INFO     | did not find any defunct processes belonging to 12131
[2025-10-21 10:40:23] 2025-10-21 08:39:48,113 | INFO     | ready for new job
[2025-10-21 10:40:23] 2025-10-21 08:39:48,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 10:40:23] 2025-10-21 08:39:48,115 | INFO     | ***************************************
[2025-10-21 10:40:23] 2025-10-21 08:39:48,116 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 10:40:23] 2025-10-21 08:39:48,116 | INFO     | ***************************************
[2025-10-21 10:40:23] 2025-10-21 08:39:48,116 | INFO     | 
[2025-10-21 10:40:23] 2025-10-21 08:39:48,117 | INFO     | pilot is running in a VM
[2025-10-21 10:40:23] 2025-10-21 08:39:48,117 | INFO     | architecture information:
[2025-10-21 10:40:23] 2025-10-21 08:39:48,120 | INFO     | executing command: cat /etc/os-release
[2025-10-21 10:40:23] 2025-10-21 08:39:48,417 | INFO     | cat /etc/os-release:
[2025-10-21 10:40:23] NAME="CentOS Linux"
[2025-10-21 10:40:23] VERSION="7 (Core)"
[2025-10-21 10:40:23] ID="centos"
[2025-10-21 10:40:23] ID_LIKE="rhel fedora"
[2025-10-21 10:40:23] VERSION_ID="7"
[2025-10-21 10:40:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 10:40:23] ANSI_COLOR="0;31"
[2025-10-21 10:40:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 10:40:23] HOME_URL="https://www.centos.org/"
[2025-10-21 10:40:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 10:40:23] 
[2025-10-21 10:40:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 10:40:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 10:40:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 10:40:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 10:40:23] 
[2025-10-21 10:40:23] 2025-10-21 08:39:48,417 | INFO     | ***************************************
[2025-10-21 10:40:23] 2025-10-21 08:39:48,921 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-10-21 10:40:23] 2025-10-21 08:39:49,120 | INFO     | sufficient remaining disk space (495482568704 B)
[2025-10-21 10:40:23] 2025-10-21 08:39:49,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 10:40:23] 2025-10-21 08:39:49,121 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 10:40:23] 2025-10-21 08:39:49,121 | INFO     | update_server=False
[2025-10-21 10:40:23] 2025-10-21 08:39:49,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 10:40:23] 2025-10-21 08:39:49,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 10:40:23] 2025-10-21 08:39:49,122 | INFO     | aborting loop
[2025-10-21 10:40:23] 2025-10-21 08:39:49,732 | INFO     | all payload control threads have been joined
[2025-10-21 10:40:23] 2025-10-21 08:39:49,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 10:40:23] 2025-10-21 08:39:50,127 | INFO     | [job] retrieve thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,128 | INFO     | [job] job monitor thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,182 | INFO     | all data control threads have been joined
[2025-10-21 10:40:23] 2025-10-21 08:39:50,206 | INFO     | all job control threads have been joined
[2025-10-21 10:40:23] 2025-10-21 08:39:50,535 | INFO     | [job] validate thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,738 | INFO     | [payload] control thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,787 | INFO     | [data] copytool_in thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,804 | INFO     | [payload] failed_post thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,849 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:50,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 10:40:23] 2025-10-21 08:39:51,186 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:51,189 | INFO     | [data] control thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:51,213 | INFO     | [job] control thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:51,306 | INFO     | [payload] validate_post thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:51,613 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:51,912 | INFO     | [job] queue monitor thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:51,951 | INFO     | [data] copytool_out thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:52,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 10:40:23] 2025-10-21 08:39:56,134 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:39:56,176 | INFO     | [monitor] cgroup control has ended
[2025-10-21 10:40:23] 2025-10-21 08:39:59,444 | INFO     | job.realtimelogging is not enabled
[2025-10-21 10:40:23] 2025-10-21 08:40:00,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 10:40:23] 2025-10-21 08:40:00,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001374807872)>', '<ExcThread(monitor, started 140000918214400)>']
[2025-10-21 10:40:23] 2025-10-21 08:40:05,991 | INFO     | all workflow threads have been joined
[2025-10-21 10:40:23] 2025-10-21 08:40:05,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 10:40:23] 2025-10-21 08:40:05,992 | INFO     | traces error code: 0
[2025-10-21 10:40:23] 2025-10-21 08:40:05,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 10:40:23] 2025-10-21 08:40:19,373 | INFO     | PID=5535 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-21 10:40:23] 2025-10-21 08:40:19,373 | INFO     | .. there are 9 such processes running
[2025-10-21 10:40:23] 2025-10-21 08:40:19,374 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 10:40:23] 2025-10-21 08:40:19,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 10:40:23] 2025-10-21 08:40:19,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 10:40:23] 2025-10-21 08:40:19,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 10:40:23] 2025-10-21 08:40:19,375 | INFO     | [monitor] control thread has ended
[2025-10-21 10:40:23] 2025-10-21 08:40:19,714 [wrapper] ==== pilot stdout END ====
[2025-10-21 10:40:23] 2025-10-21 08:40:19,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 10:40:23] 2025-10-21 08:40:19,876 [wrapper] pilotpid: 5535
[2025-10-21 10:40:23] 2025-10-21 08:40:19,954 [wrapper] Pilot exit status: 0
[2025-10-21 10:40:23] 2025-10-21 08:40:20,357 [wrapper] pandaids: 6852937345
[2025-10-21 10:40:23] 2025-10-21 08:40:21,203 [wrapper] cleanup supervisor_pilot  6721 5536
[2025-10-21 10:40:23] 2025-10-21 08:40:21,306 [wrapper] Test setup, not cleaning
[2025-10-21 10:40:23] 2025-10-21 08:40:21,338 [wrapper] apfmon messages muted
[2025-10-21 10:40:23] 2025-10-21 08:40:21,382 [wrapper] ==== wrapper stdout END ====
[2025-10-21 10:40:23] 2025-10-21 08:40:21,426 [wrapper] ==== wrapper stderr END ====
[2025-10-21 10:40:23]  *** Error codes and diagnostics ***
[2025-10-21 10:40:23]     "exeErrorCode": 0,
[2025-10-21 10:40:23]     "exeErrorDiag": "",
[2025-10-21 10:40:23]     "pilotErrorCode": 0,
[2025-10-21 10:40:23]     "pilotErrorDiag": "",
[2025-10-21 10:40:23]  *** Listing of results directory ***
[2025-10-21 10:40:23] total 432732
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc      5112 Oct 20 23:13 queuedata.json
[2025-10-21 10:40:23] -rwx------. 1 boinc boinc     36292 Oct 20 23:16 runpilot2-wrapper.sh
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc       100 Oct 21 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 10:40:23] -rwxr-xr-x. 1 boinc boinc      7986 Oct 21 06:07 run_atlas
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc       105 Oct 21 06:07 job.xml
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc      6390 Oct 21 06:07 init_data.xml
[2025-10-21 10:40:23] -rw-r--r--. 2 boinc boinc 227619290 Oct 21 06:07 EVNT.46771634._001291.pool.root.1
[2025-10-21 10:40:23] -rw-r--r--. 2 boinc boinc     15120 Oct 21 06:07 start_atlas.sh
[2025-10-21 10:40:23] drwxrwx--x. 2 boinc boinc        68 Oct 21 06:07 shared
[2025-10-21 10:40:23] -rw-r--r--. 2 boinc boinc    569683 Oct 21 06:07 input.tar.gz
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc         0 Oct 21 06:07 boinc_lockfile
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc      2561 Oct 21 06:07 pandaJob.out
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc    978830 Oct 21 06:11 agis_schedconf.cvmfs.json
[2025-10-21 10:40:23] drwx------. 5 boinc boinc      4096 Oct 21 06:11 pilot3
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc 206366313 Oct 21 10:36 HITS.46771637._049320.pool.root.1
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc       531 Oct 21 10:36 boinc_task_state.xml
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc      1016 Oct 21 10:38 memory_monitor_summary.json
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc   1560740 Oct 21 10:38 agis_ddmendpoints.agis.ALL.json
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc    475814 Oct 21 10:38 log.46771637._049320.job.log.tgz.1
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc      7785 Oct 21 10:39 heartbeat.json
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc        95 Oct 21 10:40 pilot_heartbeat.json
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc       819 Oct 21 10:40 pilotlog.txt
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc      8192 Oct 21 10:40 boinc_mmap_file
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc        28 Oct 21 10:40 wrapper_checkpoint.txt
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc   2145134 Oct 21 10:40 log.46771637._049320.job.log.1
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc       357 Oct 21 10:40 output.list
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc       620 Oct 21 10:40 runtime_log
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc   2641920 Oct 21 10:40 result.tar.gz
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc      8717 Oct 21 10:40 runtime_log.err
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc       657 Oct 21 10:40 NY4MDmQQCV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq8yNDmd2bpfm.diag
[2025-10-21 10:40:23] -rw-r--r--. 1 boinc boinc     20620 Oct 21 10:40 stderr.txt
[2025-10-21 10:40:23] HITS file was successfully produced:
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc 206366313 Oct 21 10:36 shared/HITS.pool.root.1
[2025-10-21 10:40:23]  *** Contents of shared directory: ***
[2025-10-21 10:40:23] total 426976
[2025-10-21 10:40:23] -rw-r--r--. 2 boinc boinc 227619290 Oct 21 06:07 ATLAS.root_0
[2025-10-21 10:40:23] -rw-r--r--. 2 boinc boinc     15120 Oct 21 06:07 start_atlas.sh
[2025-10-21 10:40:23] -rw-r--r--. 2 boinc boinc    569683 Oct 21 06:07 input.tar.gz
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc 206366313 Oct 21 10:36 HITS.pool.root.1
[2025-10-21 10:40:23] -rw-------. 1 boinc boinc   2641920 Oct 21 10:40 result.tar.gz
10:40:24 (1785): run_atlas exited; CPU time 59704.608684
10:40:24 (1785): called boinc_finish(0)

</stderr_txt>
]]>

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