Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:19:01 (2874854): wrapper (7.7.26015): starting
17:19:01 (2874854): wrapper: running run_atlas (--nthreads 9)
[2025-10-20 17:19:01] Arguments: --nthreads 9
[2025-10-20 17:19:01] Threads: 9
[2025-10-20 17:19:01] Checking for CVMFS
[2025-10-20 17:19:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 17:19:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 17:19:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 17:19:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 17:19:01] 2.13.1.0 5004 17730 136712 151936 0 123 20713821 40960000 15948 16776704 0 72376526 99.804 36609307 34572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 17:19:01] CVMFS is ok
[2025-10-20 17:19:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 17:19:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 17:19:01] Further information can be found at the LHC@home message board.
[2025-10-20 17:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 17:19:01] Checking for apptainer binary...
[2025-10-20 17:19:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 17:19:01] Running /usr/bin/apptainer --version
[2025-10-20 17:19:01] apptainer version 1.4.3-1.el9
[2025-10-20 17:19:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 17:19:02] c-212-12.aglt2.org
[2025-10-20 17:19:02] apptainer works
[2025-10-20 17:19:02] Set ATHENA_PROC_NUMBER=9
[2025-10-20 17:19:02] Set ATHENA_CORE_NUMBER=9
[2025-10-20 17:19:02] Starting ATLAS job with PandaID=6852937320
[2025-10-20 17:19:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 21:49:46]  *** The last 200 lines of the pilot log: ***
[2025-10-20 21:49:46] 2025-10-21 01:48:57,497 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-20 21:49:46] 2025-10-21 01:48:57,504 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3001.590854166668
[2025-10-20 21:49:46] 2025-10-21 01:48:57,520 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6852937320/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,521 | INFO     | extracted standard info from prmon json
[2025-10-20 21:49:46] 2025-10-21 01:48:57,522 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 21:49:46] 2025-10-21 01:48:57,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 21:49:46] 2025-10-21 01:48:57,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 21:49:46] 2025-10-21 01:48:57,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 21:49:46] 2025-10-21 01:48:57,526 | INFO     | fitting pss+swap vs Time
[2025-10-20 21:49:46] 2025-10-21 01:48:57,527 | INFO     | sum of square deviations: 5770506797.86415
[2025-10-20 21:49:46] 2025-10-21 01:48:57,529 | INFO     | sum of deviations: 26623478907.086826
[2025-10-20 21:49:46] 2025-10-21 01:48:57,529 | INFO     | mean x: 1761003232.0226414
[2025-10-20 21:49:46] 2025-10-21 01:48:57,529 | INFO     | mean y: 2555945.8188679246
[2025-10-20 21:49:46] 2025-10-21 01:48:57,530 | INFO     | -- intersect: -8122212648.235957
[2025-10-20 21:49:46] 2025-10-21 01:48:57,530 | INFO     | intersect: -8122212648.235957
[2025-10-20 21:49:46] 2025-10-21 01:48:57,530 | INFO     | chi2: 1.185537606184927
[2025-10-20 21:49:46] 2025-10-21 01:48:57,530 | INFO     | sum of square deviations: 5450000292.8615465
[2025-10-20 21:49:46] 2025-10-21 01:48:57,532 | INFO     | sum of deviations: 25972599448.169224
[2025-10-20 21:49:46] 2025-10-21 01:48:57,532 | INFO     | mean x: 1761003079.523077
[2025-10-20 21:49:46] 2025-10-21 01:48:57,532 | INFO     | mean y: 2555636.3884615386
[2025-10-20 21:49:46] 2025-10-21 01:48:57,532 | INFO     | -- intersect: -8389705859.698639
[2025-10-20 21:49:46] 2025-10-21 01:48:57,532 | INFO     | intersect: -8389705859.698639
[2025-10-20 21:49:46] 2025-10-21 01:48:57,533 | INFO     | chi2: 1.1859180467653403
[2025-10-20 21:49:46] 2025-10-21 01:48:57,533 | INFO     | current chi2=1.1859180467653403 (change=-0.0320901318042177 %)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,533 | INFO     | right removable region: 259
[2025-10-20 21:49:46] 2025-10-21 01:48:57,533 | INFO     | sum of square deviations: 5449996632.8615465
[2025-10-20 21:49:46] 2025-10-21 01:48:57,535 | INFO     | sum of deviations: -7529397621.169232
[2025-10-20 21:49:46] 2025-10-21 01:48:57,536 | INFO     | mean x: 1761003384.523077
[2025-10-20 21:49:46] 2025-10-21 01:48:57,537 | INFO     | mean y: 2572037.3615384614
[2025-10-20 21:49:46] 2025-10-21 01:48:57,537 | INFO     | -- intersect: 2435471649.509953
[2025-10-20 21:49:46] 2025-10-21 01:48:57,537 | INFO     | intersect: 2435471649.509953
[2025-10-20 21:49:46] 2025-10-21 01:48:57,537 | INFO     | chi2: 0.010725388405335181
[2025-10-20 21:49:46] 2025-10-21 01:48:57,537 | INFO     | current chi2=0.010725388405335181 (change=99.09531436629416 %)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,538 | INFO     | sum of square deviations: 5141579717.858824
[2025-10-20 21:49:46] 2025-10-21 01:48:57,539 | INFO     | sum of deviations: -6945008424.552942
[2025-10-20 21:49:46] 2025-10-21 01:48:57,539 | INFO     | mean x: 1761003537.0235295
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | mean y: 2571744.925490196
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | -- intersect: 2381253992.682046
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | intersect: 2381253992.682046
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | chi2: 0.010501759508685779
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | current chi2=0.010501759508685779 (change=2.085042407771093 %)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | left removable region: 20
[2025-10-20 21:49:46] 2025-10-21 01:48:57,540 | INFO     | sum of square deviations: 4233207733.849374
[2025-10-20 21:49:46] 2025-10-21 01:48:57,542 | INFO     | sum of deviations: -4397476919.778243
[2025-10-20 21:49:46] 2025-10-21 01:48:57,542 | INFO     | mean x: 1761003659.0251045
[2025-10-20 21:49:46] 2025-10-21 01:48:57,542 | INFO     | mean y: 2570326.129707113
[2025-10-20 21:49:46] 2025-10-21 01:48:57,542 | INFO     | -- intersect: 1831909549.0282066
[2025-10-20 21:49:46] 2025-10-21 01:48:57,542 | INFO     | intersect: 1831909549.0282066
[2025-10-20 21:49:46] 2025-10-21 01:48:57,543 | INFO     | chi2: 0.009220419512694459
[2025-10-20 21:49:46] 2025-10-21 01:48:57,543 | INFO     | -- intersect: 1831909549.0282066
[2025-10-20 21:49:46] 2025-10-21 01:48:57,543 | INFO     | current memory leak: -1.04 B/s (using 239 data points, chi2=0.01)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | could have reported an average CPU frequency of 3010 MHz (12 samples)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | ..............................
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . Timing measurements:
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . get job = 0 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . initial setup = 2 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . payload setup = 5 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . stage-in = 0 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . payload execution = 16146 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . stage-out = 2 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | . log creation = 0 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,544 | INFO     | ..............................
[2025-10-20 21:49:46] 2025-10-21 01:48:57,641 | INFO     | 
[2025-10-20 21:49:46] 2025-10-21 01:48:57,645 | INFO     | job summary report
[2025-10-20 21:49:46] 2025-10-21 01:48:57,645 | INFO     | --------------------------------------------------
[2025-10-20 21:49:46] 2025-10-21 01:48:57,676 | INFO     | PanDA job id: 6852937320
[2025-10-20 21:49:46] 2025-10-21 01:48:57,676 | INFO     | task id: 46771637
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | errors: (none)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | pilot state: finished 
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | transexitcode: 0
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | exeerrorcode: 0
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | exeerrordiag: 
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | exitcode: 0
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | exitmsg: OK
[2025-10-20 21:49:46] 2025-10-21 01:48:57,677 | INFO     | cpuconsumptiontime: 38485 s
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | nevents: 400
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | neventsw: 0
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | pid: 2907547
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | pgrp: 2907547
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | corecount: 9
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | event service: False
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | sizes: {0: 2348882, 5: 2349144, 11: 2349200, 16156: 2381146, 16159: 2390144, 16160: 2390200, 16169: 2390522}
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | --------------------------------------------------
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | 
[2025-10-20 21:49:46] 2025-10-21 01:48:57,678 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-20 21:49:46] 2025-10-21 01:48:57,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 21:49:46] 2025-10-21 01:48:57,734 | INFO     | job 6852937320 has completed (purged errors)
[2025-10-20 21:49:46] 2025-10-21 01:48:57,734 | INFO     | overall cleanup function is called
[2025-10-20 21:49:46] 2025-10-21 01:48:57,785 | INFO     | PID=2882141 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-20 21:49:46] 2025-10-21 01:48:57,786 | INFO     | .. there are 20 such processes running
[2025-10-20 21:49:46] 2025-10-21 01:48:58,746 | INFO     | --- collectZombieJob: --- 10, [2907547]
[2025-10-20 21:49:46] 2025-10-21 01:48:58,747 | INFO     | zombie collector waiting for pid 2907547
[2025-10-20 21:49:46] 2025-10-21 01:48:58,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 21:49:46] 2025-10-21 01:48:58,747 | INFO     | collected zombie processes
[2025-10-20 21:49:46] 2025-10-21 01:48:58,747 | INFO     | will attempt to kill all subprocesses of pid=2907547
[2025-10-20 21:49:46] 2025-10-21 01:48:59,186 | INFO     | process IDs to be killed: [2907547] (in reverse order)
[2025-10-20 21:49:46] 2025-10-21 01:48:59,317 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 21:49:46] 2025-10-21 01:48:59,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 21:49:46] 2025-10-21 01:48:59,341 | INFO     | did not find any defunct processes belonging to 2907547
[2025-10-20 21:49:46] 2025-10-21 01:48:59,359 | INFO     | did not find any defunct processes belonging to 2907547
[2025-10-20 21:49:46] 2025-10-21 01:48:59,359 | INFO     | ready for new job
[2025-10-20 21:49:46] 2025-10-21 01:48:59,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 21:49:46] 2025-10-21 01:48:59,362 | INFO     | ***************************************
[2025-10-20 21:49:46] 2025-10-21 01:48:59,362 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 21:49:46] 2025-10-21 01:48:59,362 | INFO     | ***************************************
[2025-10-20 21:49:46] 2025-10-21 01:48:59,362 | INFO     | 
[2025-10-20 21:49:46] 2025-10-21 01:48:59,367 | INFO     | architecture information:
[2025-10-20 21:49:46] 2025-10-21 01:48:59,368 | INFO     | executing command: cat /etc/os-release
[2025-10-20 21:49:46] 2025-10-21 01:48:59,391 | INFO     | cat /etc/os-release:
[2025-10-20 21:49:46] NAME="CentOS Linux"
[2025-10-20 21:49:46] VERSION="7 (Core)"
[2025-10-20 21:49:46] ID="centos"
[2025-10-20 21:49:46] ID_LIKE="rhel fedora"
[2025-10-20 21:49:46] VERSION_ID="7"
[2025-10-20 21:49:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 21:49:46] ANSI_COLOR="0;31"
[2025-10-20 21:49:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 21:49:46] HOME_URL="https://www.centos.org/"
[2025-10-20 21:49:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 21:49:46] 
[2025-10-20 21:49:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 21:49:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 21:49:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 21:49:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 21:49:46] 
[2025-10-20 21:49:46] 2025-10-21 01:48:59,391 | INFO     | ***************************************
[2025-10-20 21:49:46] 2025-10-21 01:48:59,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-20 21:49:46] 2025-10-21 01:48:59,920 | INFO     | sufficient remaining disk space (127836094464 B)
[2025-10-20 21:49:46] 2025-10-21 01:48:59,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 21:49:46] 2025-10-21 01:48:59,920 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 21:49:46] 2025-10-21 01:48:59,921 | INFO     | update_server=False
[2025-10-20 21:49:46] 2025-10-21 01:48:59,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 21:49:46] 2025-10-21 01:48:59,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 21:49:46] 2025-10-21 01:48:59,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 21:49:46] 2025-10-21 01:48:59,922 | INFO     | aborting loop
[2025-10-20 21:49:46] 2025-10-21 01:49:00,013 | INFO     | all data control threads have been joined
[2025-10-20 21:49:46] 2025-10-21 01:49:00,791 | INFO     | all job control threads have been joined
[2025-10-20 21:49:46] 2025-10-21 01:49:00,925 | INFO     | [job] retrieve thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:00,926 | INFO     | [job] job monitor thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,019 | INFO     | [data] control thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 21:49:46] 2025-10-21 01:49:01,420 | INFO     | [job] validate thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,422 | INFO     | all payload control threads have been joined
[2025-10-20 21:49:46] 2025-10-21 01:49:01,503 | INFO     | [payload] failed_post thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,796 | INFO     | [job] control thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,890 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,894 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:01,944 | INFO     | [payload] validate_post thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:02,202 | INFO     | [data] copytool_in thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:02,274 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:02,427 | INFO     | [payload] control thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:02,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 21:49:46] 2025-10-21 01:49:03,045 | INFO     | [data] copytool_out thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:03,653 | INFO     | [job] queue monitor thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:03,928 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 21:49:46] 2025-10-21 01:49:11,939 [wrapper] supervise_pilot (15 min periods counter: 19)
[2025-10-20 21:49:46] 2025-10-21 01:49:30,212 | INFO     | PID=2882141 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 21:49:46] 2025-10-21 01:49:30,213 | INFO     | .. there are 21 such processes running
[2025-10-20 21:49:46] 2025-10-21 01:49:30,213 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 21:49:46] 2025-10-21 01:49:30,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 21:49:46] 2025-10-21 01:49:30,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 21:49:46] 2025-10-21 01:49:40,023 | INFO     | [monitor] cgroup control has ended
[2025-10-20 21:49:46] 2025-10-21 01:49:41,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193873520448)>', '<ExcThread(monitor, started 140193159964416)>']
[2025-10-20 21:49:46] 2025-10-21 01:49:42,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 21:49:46] 2025-10-21 01:49:42,272 | INFO     | [monitor] control thread has ended
[2025-10-20 21:49:46] 2025-10-21 01:49:46,292 | INFO     | all workflow threads have been joined
[2025-10-20 21:49:46] 2025-10-21 01:49:46,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 21:49:46] 2025-10-21 01:49:46,292 | INFO     | traces error code: 0
[2025-10-20 21:49:46] 2025-10-21 01:49:46,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 21:49:46] 2025-10-21 01:49:46,544 [wrapper] ==== pilot stdout END ====
[2025-10-20 21:49:46] 2025-10-21 01:49:46,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 21:49:46] 2025-10-21 01:49:46,554 [wrapper] pilotpid: 2882141
[2025-10-20 21:49:46] 2025-10-21 01:49:46,558 [wrapper] Pilot exit status: 0
[2025-10-20 21:49:46] 2025-10-21 01:49:46,573 [wrapper] pandaids: 6852937320
[2025-10-20 21:49:46] 2025-10-21 01:49:46,653 [wrapper] cleanup supervisor_pilot 3694424 2882142
[2025-10-20 21:49:46] 2025-10-21 01:49:46,656 [wrapper] Test setup, not cleaning
[2025-10-20 21:49:46] 2025-10-21 01:49:46,660 [wrapper] apfmon messages muted
[2025-10-20 21:49:46] 2025-10-21 01:49:46,663 [wrapper] ==== wrapper stdout END ====
[2025-10-20 21:49:46] 2025-10-21 01:49:46,665 [wrapper] ==== wrapper stderr END ====
[2025-10-20 21:49:46]  *** Error codes and diagnostics ***
[2025-10-20 21:49:46]     "exeErrorCode": 0,
[2025-10-20 21:49:46]     "exeErrorDiag": "",
[2025-10-20 21:49:46]     "pilotErrorCode": 0,
[2025-10-20 21:49:46]     "pilotErrorDiag": "",
[2025-10-20 21:49:46]  *** Listing of results directory ***
[2025-10-20 21:49:46] total 433776
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 16:52 pilot3.tar.gz
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 17:13 queuedata.json
[2025-10-20 21:49:46] -rwx------. 1 boincer umatlas     36292 Oct 20 17:16 runpilot2-wrapper.sh
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas       100 Oct 20 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 21:49:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 17:19 run_atlas
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas       105 Oct 20 17:19 job.xml
[2025-10-20 21:49:46] -rw-r--r--. 2 boincer umatlas 227213574 Oct 20 17:19 EVNT.46771634._001268.pool.root.1
[2025-10-20 21:49:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 17:19 start_atlas.sh
[2025-10-20 21:49:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 17:19 shared
[2025-10-20 21:49:46] -rw-r--r--. 2 boincer umatlas    569695 Oct 20 17:19 input.tar.gz
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas         0 Oct 20 17:19 boinc_lockfile
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas      2561 Oct 20 17:19 pandaJob.out
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas    978846 Oct 20 17:19 agis_schedconf.cvmfs.json
[2025-10-20 21:49:46] drwx------. 5 boincer umatlas      4096 Oct 20 17:19 pilot3
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas 207803236 Oct 20 21:48 HITS.46771637._049295.pool.root.1
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas       530 Oct 20 21:48 boinc_task_state.xml
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas      1041 Oct 20 21:48 memory_monitor_summary.json
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas   1560740 Oct 20 21:48 agis_ddmendpoints.agis.ALL.json
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas    511957 Oct 20 21:48 log.46771637._049295.job.log.tgz.1
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas      6947 Oct 20 21:48 init_data.xml
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas      7781 Oct 20 21:48 heartbeat.json
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas        95 Oct 20 21:49 pilot_heartbeat.json
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas        28 Oct 20 21:49 wrapper_checkpoint.txt
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 21:49 boinc_mmap_file
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas      4825 Oct 20 21:49 pilotlog.txt
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas   2120376 Oct 20 21:49 log.46771637._049295.job.log.1
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas       357 Oct 20 21:49 output.list
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas       620 Oct 20 21:49 runtime_log
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas   2652160 Oct 20 21:49 result.tar.gz
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas      8704 Oct 20 21:49 runtime_log.err
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas       656 Oct 20 21:49 ITsMDmQQCV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf8yNDmJLDycm.diag
[2025-10-20 21:49:46] -rw-r--r--. 1 boincer umatlas     21246 Oct 20 21:49 stderr.txt
[2025-10-20 21:49:46] HITS file was successfully produced:
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas 207803236 Oct 20 21:48 shared/HITS.pool.root.1
[2025-10-20 21:49:46]  *** Contents of shared directory: ***
[2025-10-20 21:49:46] total 428000
[2025-10-20 21:49:46] -rw-r--r--. 2 boincer umatlas 227213574 Oct 20 17:19 ATLAS.root_0
[2025-10-20 21:49:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 17:19 start_atlas.sh
[2025-10-20 21:49:46] -rw-r--r--. 2 boincer umatlas    569695 Oct 20 17:19 input.tar.gz
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas 207803236 Oct 20 21:48 HITS.pool.root.1
[2025-10-20 21:49:46] -rw-------. 1 boincer umatlas   2652160 Oct 20 21:49 result.tar.gz
21:49:48 (2874854): run_atlas exited; CPU time 39022.297136
21:49:48 (2874854): called boinc_finish(0)

</stderr_txt>
]]>

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