Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:19:22 (2896915): wrapper (7.7.26015): starting
17:19:22 (2896915): wrapper: running run_atlas (--nthreads 9)
[2025-10-20 17:19:22] Arguments: --nthreads 9
[2025-10-20 17:19:22] Threads: 9
[2025-10-20 17:19:22] Checking for CVMFS
[2025-10-20 17:19:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 17:19:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 17:19:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 17:19:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 17:19:23] 2.13.1.0 5004 17731 137716 151936 0 291 20713884 40960000 16527 16776704 0 72434518 99.804 36609317 34571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 17:19:23] CVMFS is ok
[2025-10-20 17:19:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 17:19:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 17:19:23] Further information can be found at the LHC@home message board.
[2025-10-20 17:19:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 17:19:23] Checking for apptainer binary...
[2025-10-20 17:19:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 17:19:23] Running /usr/bin/apptainer --version
[2025-10-20 17:19:23] apptainer version 1.4.3-1.el9
[2025-10-20 17:19:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 17:19:23] c-212-12.aglt2.org
[2025-10-20 17:19:23] apptainer works
[2025-10-20 17:19:23] Set ATHENA_PROC_NUMBER=9
[2025-10-20 17:19:23] Set ATHENA_CORE_NUMBER=9
[2025-10-20 17:19:23] Starting ATLAS job with PandaID=6852935708
[2025-10-20 17:19:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 20:02:59]  *** The last 200 lines of the pilot log: ***
[2025-10-20 20:02:59] 2025-10-21 00:02:14,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 20:02:59] 2025-10-21 00:02:14,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 20:02:59] 2025-10-21 00:02:14,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 20:02:59] 2025-10-21 00:02:14,636 | INFO     | fitting pss+swap vs Time
[2025-10-20 20:02:59] 2025-10-21 00:02:14,636 | INFO     | sum of square deviations: 1270060931.9937544
[2025-10-20 20:02:59] 2025-10-21 00:02:14,637 | INFO     | sum of deviations: -1218074356.7062435
[2025-10-20 20:02:59] 2025-10-21 00:02:14,637 | INFO     | mean x: 1761000053.50625
[2025-10-20 20:02:59] 2025-10-21 00:02:14,637 | INFO     | mean y: 2535685.20625
[2025-10-20 20:02:59] 2025-10-21 00:02:14,637 | INFO     | -- intersect: 1691453872.7509985
[2025-10-20 20:02:59] 2025-10-21 00:02:14,637 | INFO     | intersect: 1691453872.7509985
[2025-10-20 20:02:59] 2025-10-21 00:02:14,638 | INFO     | chi2: 1.9661265609210052
[2025-10-20 20:02:59] 2025-10-21 00:02:14,638 | INFO     | sum of square deviations: 1154663510.0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,639 | INFO     | sum of deviations: 9643189269.999996
[2025-10-20 20:02:59] 2025-10-21 00:02:14,639 | INFO     | mean x: 1760999901.0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,639 | INFO     | mean y: 2549677.4903225806
[2025-10-20 20:02:59] 2025-10-21 00:02:14,643 | INFO     | -- intersect: -14704466871.24798
[2025-10-20 20:02:59] 2025-10-21 00:02:14,643 | INFO     | intersect: -14704466871.24798
[2025-10-20 20:02:59] 2025-10-21 00:02:14,643 | INFO     | chi2: 1.182740416699522
[2025-10-20 20:02:59] 2025-10-21 00:02:14,643 | INFO     | current chi2=1.182740416699522 (change=39.844136170690696 %)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,644 | INFO     | sum of square deviations: 1046484737.5
[2025-10-20 20:02:59] 2025-10-21 00:02:14,644 | INFO     | sum of deviations: 9473113035.000004
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | mean x: 1760999748.5
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | mean y: 2549437.64
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | -- intersect: -15938580971.963398
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | intersect: -15938580971.963398
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | chi2: 1.1838009071307818
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | current chi2=1.1838009071307818 (change=-0.08966383631492204 %)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | right removable region: 149
[2025-10-20 20:02:59] 2025-10-21 00:02:14,645 | INFO     | sum of square deviations: 1154672416.9935462
[2025-10-20 20:02:59] 2025-10-21 00:02:14,646 | INFO     | sum of deviations: -19856435239.090324
[2025-10-20 20:02:59] 2025-10-21 00:02:14,646 | INFO     | mean x: 1761000206.0064516
[2025-10-20 20:02:59] 2025-10-21 00:02:14,646 | INFO     | mean y: 2559854.0903225807
[2025-10-20 20:02:59] 2025-10-21 00:02:14,646 | INFO     | -- intersect: 30285769214.574482
[2025-10-20 20:02:59] 2025-10-21 00:02:14,647 | INFO     | intersect: 30285769214.574482
[2025-10-20 20:02:59] 2025-10-21 00:02:14,647 | INFO     | chi2: 0.814029559258208
[2025-10-20 20:02:59] 2025-10-21 00:02:14,647 | INFO     | current chi2=0.814029559258208 (change=58.597296052147996 %)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,651 | INFO     | sum of square deviations: 1046493339.493336
[2025-10-20 20:02:59] 2025-10-21 00:02:14,652 | INFO     | sum of deviations: -18773573841.253334
[2025-10-20 20:02:59] 2025-10-21 00:02:14,652 | INFO     | mean x: 1761000358.5066667
[2025-10-20 20:02:59] 2025-10-21 00:02:14,652 | INFO     | mean y: 2558317.2533333334
[2025-10-20 20:02:59] 2025-10-21 00:02:14,652 | INFO     | -- intersect: 31594035316.91084
[2025-10-20 20:02:59] 2025-10-21 00:02:14,652 | INFO     | intersect: 31594035316.91084
[2025-10-20 20:02:59] 2025-10-21 00:02:14,653 | INFO     | chi2: 0.8143206403176836
[2025-10-20 20:02:59] 2025-10-21 00:02:14,653 | INFO     | current chi2=0.8143206403176836 (change=-0.03575804541310119 %)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,653 | INFO     | left removable region: 20
[2025-10-20 20:02:59] 2025-10-21 00:02:14,653 | INFO     | sum of square deviations: 665612480.0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,653 | INFO     | sum of deviations: -5906232097.000001
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | mean x: 1761000328.0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | mean y: 2571676.8139534886
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | -- intersect: 15628595786.30951
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | intersect: 15628595786.30951
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | chi2: 0.0072420523596004585
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | -- intersect: 15628595786.30951
[2025-10-20 20:02:59] 2025-10-21 00:02:14,654 | INFO     | current memory leak: -8.87 B/s (using 129 data points, chi2=0.01)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | could have reported an average CPU frequency of 3022 MHz (9 samples)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | ..............................
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | . Timing measurements:
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | . get job = 0 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | . initial setup = 2 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | . payload setup = 6 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | . stage-in = 0 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,655 | INFO     | . payload execution = 9715 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,656 | INFO     | . stage-out = 3 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,656 | INFO     | . log creation = 0 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,656 | INFO     | ..............................
[2025-10-20 20:02:59] 2025-10-21 00:02:14,746 | INFO     | 
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | job summary report
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | --------------------------------------------------
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | PanDA job id: 6852935708
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | task id: 46771637
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | errors: (none)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | pilot state: finished 
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | transexitcode: 0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | exeerrorcode: 0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | exeerrordiag: 
[2025-10-20 20:02:59] 2025-10-21 00:02:14,747 | INFO     | exitcode: 0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | exitmsg: OK
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | cpuconsumptiontime: 38189 s
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | nevents: 400
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | neventsw: 0
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | pid: 2931818
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | pgrp: 2931818
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | corecount: 9
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | event service: False
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | sizes: {0: 2348878, 6: 2349140, 11: 2349168, 9727: 2377592, 9732: 2386674, 9744: 2386876}
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | --------------------------------------------------
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | 
[2025-10-20 20:02:59] 2025-10-21 00:02:14,748 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-20 20:02:59] 2025-10-21 00:02:14,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | job 6852935708 has completed (purged errors)
[2025-10-20 20:02:59] 2025-10-21 00:02:14,829 | INFO     | overall cleanup function is called
[2025-10-20 20:02:59] 2025-10-21 00:02:15,863 | INFO     | --- collectZombieJob: --- 10, [2931818]
[2025-10-20 20:02:59] 2025-10-21 00:02:15,863 | INFO     | zombie collector waiting for pid 2931818
[2025-10-20 20:02:59] 2025-10-21 00:02:15,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 20:02:59] 2025-10-21 00:02:15,864 | INFO     | collected zombie processes
[2025-10-20 20:02:59] 2025-10-21 00:02:15,864 | INFO     | will attempt to kill all subprocesses of pid=2931818
[2025-10-20 20:02:59] 2025-10-21 00:02:16,880 | INFO     | process IDs to be killed: [2931818] (in reverse order)
[2025-10-20 20:02:59] 2025-10-21 00:02:17,453 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 20:02:59] 2025-10-21 00:02:17,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 20:02:59] 2025-10-21 00:02:17,559 | INFO     | did not find any defunct processes belonging to 2931818
[2025-10-20 20:02:59] 2025-10-21 00:02:17,691 | INFO     | did not find any defunct processes belonging to 2931818
[2025-10-20 20:02:59] 2025-10-21 00:02:17,691 | INFO     | ready for new job
[2025-10-20 20:02:59] 2025-10-21 00:02:17,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 20:02:59] 2025-10-21 00:02:17,694 | INFO     | ***************************************
[2025-10-20 20:02:59] 2025-10-21 00:02:17,694 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 20:02:59] 2025-10-21 00:02:17,706 | INFO     | ***************************************
[2025-10-20 20:02:59] 2025-10-21 00:02:17,707 | INFO     | 
[2025-10-20 20:02:59] 2025-10-21 00:02:17,716 | INFO     | architecture information:
[2025-10-20 20:02:59] 2025-10-21 00:02:17,720 | INFO     | executing command: cat /etc/os-release
[2025-10-20 20:02:59] 2025-10-21 00:02:17,873 | INFO     | cat /etc/os-release:
[2025-10-20 20:02:59] NAME="CentOS Linux"
[2025-10-20 20:02:59] VERSION="7 (Core)"
[2025-10-20 20:02:59] ID="centos"
[2025-10-20 20:02:59] ID_LIKE="rhel fedora"
[2025-10-20 20:02:59] VERSION_ID="7"
[2025-10-20 20:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 20:02:59] ANSI_COLOR="0;31"
[2025-10-20 20:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 20:02:59] HOME_URL="https://www.centos.org/"
[2025-10-20 20:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 20:02:59] 
[2025-10-20 20:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 20:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 20:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 20:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 20:02:59] 
[2025-10-20 20:02:59] 2025-10-21 00:02:17,873 | INFO     | ***************************************
[2025-10-20 20:02:59] 2025-10-21 00:02:18,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-20 20:02:59] 2025-10-21 00:02:18,540 | INFO     | sufficient remaining disk space (126715166720 B)
[2025-10-20 20:02:59] 2025-10-21 00:02:18,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 20:02:59] 2025-10-21 00:02:18,541 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 20:02:59] 2025-10-21 00:02:18,541 | INFO     | update_server=False
[2025-10-20 20:02:59] 2025-10-21 00:02:18,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 20:02:59] 2025-10-21 00:02:18,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 20:02:59] 2025-10-21 00:02:18,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 20:02:59] 2025-10-21 00:02:18,553 | INFO     | aborting loop
[2025-10-20 20:02:59] 2025-10-21 00:02:18,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 20:02:59] 2025-10-21 00:02:18,732 | INFO     | all payload control threads have been joined
[2025-10-20 20:02:59] 2025-10-21 00:02:19,339 | INFO     | all data control threads have been joined
[2025-10-20 20:02:59] 2025-10-21 00:02:19,413 | INFO     | all job control threads have been joined
[2025-10-20 20:02:59] 2025-10-21 00:02:19,549 | INFO     | [job] retrieve thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:19,558 | INFO     | [job] job monitor thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:19,738 | INFO     | [payload] control thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:19,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 20:02:59] 2025-10-21 00:02:19,869 | INFO     | [job] validate thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:19,880 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:19,885 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,328 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,345 | INFO     | [data] control thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,472 | INFO     | [payload] failed_post thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,473 | INFO     | [job] control thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,512 | INFO     | [data] copytool_in thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,573 | INFO     | [payload] validate_post thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,738 | INFO     | [data] copytool_out thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:20,767 | INFO     | [job] queue monitor thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:22,555 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 20:02:59] 2025-10-21 00:02:48,722 | INFO     | PID=2906438 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 20:02:59] 2025-10-21 00:02:48,722 | INFO     | .. there are 23 such processes running
[2025-10-20 20:02:59] 2025-10-21 00:02:48,734 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 20:02:59] 2025-10-21 00:02:48,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 20:02:59] 2025-10-21 00:02:48,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 20:02:59] 2025-10-21 00:02:51,413 | INFO     | [monitor] cgroup control has ended
[2025-10-20 20:02:59] 2025-10-21 00:02:52,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674397620032)>', '<ExcThread(monitor, started 139673603139328)>']
[2025-10-20 20:02:59] 2025-10-21 00:02:53,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 20:02:59] 2025-10-21 00:02:53,766 | INFO     | [monitor] control thread has ended
[2025-10-20 20:02:59] 2025-10-21 00:02:57,979 | INFO     | all workflow threads have been joined
[2025-10-20 20:02:59] 2025-10-21 00:02:57,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 20:02:59] 2025-10-21 00:02:57,980 | INFO     | traces error code: 0
[2025-10-20 20:02:59] 2025-10-21 00:02:57,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 20:02:59] 2025-10-21 00:02:58,941 [wrapper] ==== pilot stdout END ====
[2025-10-20 20:02:59] 2025-10-21 00:02:58,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 20:02:59] 2025-10-21 00:02:58,970 [wrapper] pilotpid: 2906438
[2025-10-20 20:02:59] 2025-10-21 00:02:58,983 [wrapper] Pilot exit status: 0
[2025-10-20 20:02:59] 2025-10-21 00:02:59,069 [wrapper] pandaids: 6852935708
[2025-10-20 20:02:59] 2025-10-21 00:02:59,199 [wrapper] cleanup supervisor_pilot 3429957 2906439
[2025-10-20 20:02:59] 2025-10-21 00:02:59,231 [wrapper] Test setup, not cleaning
[2025-10-20 20:02:59] 2025-10-21 00:02:59,236 [wrapper] apfmon messages muted
[2025-10-20 20:02:59] 2025-10-21 00:02:59,242 [wrapper] ==== wrapper stdout END ====
[2025-10-20 20:02:59] 2025-10-21 00:02:59,246 [wrapper] ==== wrapper stderr END ====
[2025-10-20 20:02:59]  *** Error codes and diagnostics ***
[2025-10-20 20:02:59]     "exeErrorCode": 0,
[2025-10-20 20:02:59]     "exeErrorDiag": "",
[2025-10-20 20:02:59]     "pilotErrorCode": 0,
[2025-10-20 20:02:59]     "pilotErrorDiag": "",
[2025-10-20 20:02:59]  *** Listing of results directory ***
[2025-10-20 20:02:59] total 429596
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 16:52 pilot3.tar.gz
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 17:13 queuedata.json
[2025-10-20 20:02:59] -rwx------. 1 boincer umatlas     36292 Oct 20 17:14 runpilot2-wrapper.sh
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas       100 Oct 20 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 20:02:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 17:19 run_atlas
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas       105 Oct 20 17:19 job.xml
[2025-10-20 20:02:59] -rw-r--r--. 2 boincer umatlas 231548267 Oct 20 17:19 EVNT.46771634._001046.pool.root.1
[2025-10-20 20:02:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 17:19 start_atlas.sh
[2025-10-20 20:02:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 17:19 shared
[2025-10-20 20:02:59] -rw-r--r--. 2 boincer umatlas    569671 Oct 20 17:19 input.tar.gz
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas         0 Oct 20 17:19 boinc_lockfile
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas      2559 Oct 20 17:19 pandaJob.out
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas    978846 Oct 20 17:19 agis_schedconf.cvmfs.json
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas   1560740 Oct 20 17:19 agis_ddmendpoints.agis.ALL.json
[2025-10-20 20:02:59] drwx------. 5 boincer umatlas      4096 Oct 20 17:19 pilot3
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas 201150358 Oct 20 20:01 HITS.46771637._048844.pool.root.1
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas       529 Oct 20 20:01 boinc_task_state.xml
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas      1035 Oct 20 20:01 memory_monitor_summary.json
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas    396161 Oct 20 20:02 log.46771637._048844.job.log.tgz.1
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas      7773 Oct 20 20:02 heartbeat.json
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas      6945 Oct 20 20:02 init_data.xml
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas        95 Oct 20 20:02 pilot_heartbeat.json
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas      4825 Oct 20 20:02 pilotlog.txt
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 20:02 boinc_mmap_file
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas        27 Oct 20 20:02 wrapper_checkpoint.txt
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas   1258617 Oct 20 20:02 log.46771637._048844.job.log.1
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas       357 Oct 20 20:02 output.list
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas       620 Oct 20 20:02 runtime_log
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas   1669120 Oct 20 20:02 result.tar.gz
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas      8703 Oct 20 20:02 runtime_log.err
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas       653 Oct 20 20:02 7G2NDmQOCV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK7yNDmmHIdbm.diag
[2025-10-20 20:02:59] -rw-r--r--. 1 boincer umatlas     20912 Oct 20 20:02 stderr.txt
[2025-10-20 20:02:59] HITS file was successfully produced:
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas 201150358 Oct 20 20:01 shared/HITS.pool.root.1
[2025-10-20 20:02:59]  *** Contents of shared directory: ***
[2025-10-20 20:02:59] total 424772
[2025-10-20 20:02:59] -rw-r--r--. 2 boincer umatlas 231548267 Oct 20 17:19 ATLAS.root_0
[2025-10-20 20:02:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 17:19 start_atlas.sh
[2025-10-20 20:02:59] -rw-r--r--. 2 boincer umatlas    569671 Oct 20 17:19 input.tar.gz
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas 201150358 Oct 20 20:01 HITS.pool.root.1
[2025-10-20 20:02:59] -rw-------. 1 boincer umatlas   1669120 Oct 20 20:02 result.tar.gz
20:03:01 (2896915): run_atlas exited; CPU time 38503.695147
20:03:01 (2896915): called boinc_finish(0)

</stderr_txt>
]]>

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