Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:43 (22901): wrapper (7.7.26015): starting
17:08:43 (22901): wrapper: running run_atlas (--nthreads 12)
[2025-10-20 17:08:43] Arguments: --nthreads 12
[2025-10-20 17:08:43] Threads: 12
[2025-10-20 17:08:43] Checking for CVMFS
[2025-10-20 17:08:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 17:08:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 17:08:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 17:08:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 17:08:43] 2.11.2.0 2991 234876 102020 151934 0 1 11875679 20275201 1 130560 1 115898143 99.984 13858922 12742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 17:08:43] CVMFS is ok
[2025-10-20 17:08:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 17:08:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 17:08:43] Further information can be found at the LHC@home message board.
[2025-10-20 17:08:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 17:08:43] Checking for apptainer binary...
[2025-10-20 17:08:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 17:08:43] Running /usr/bin/apptainer --version
[2025-10-20 17:08:43] apptainer version 1.3.2-1.el7
[2025-10-20 17:08:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 17:08:45] c-205-32.aglt2.org
[2025-10-20 17:08:45] apptainer works
[2025-10-20 17:08:45] Set ATHENA_PROC_NUMBER=12
[2025-10-20 17:08:45] Set ATHENA_CORE_NUMBER=12
[2025-10-20 17:08:45] Starting ATLAS job with PandaID=6852929883
[2025-10-20 17:08:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 18:27:13]  *** The last 200 lines of the pilot log: ***
[2025-10-20 18:27:13]  workdir=None
[2025-10-20 18:27:13] ]
[2025-10-20 18:27:13] 2025-10-20 22:25:56,579 | INFO     | transferring file log.46771637._048308.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6852929883/log.46771637._048308.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-20 18:27:13] 2025-10-20 22:25:56,579 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6852929883/log.46771637._048308.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._048308.job
[2025-10-20 18:27:13] 2025-10-20 22:25:56,599 | INFO     | adding to output.list: log.46771637._048308.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/72/log.46771637._048308.job.log.tg
[2025-10-20 18:27:13] 2025-10-20 22:25:56,600 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-20 18:27:13] 2025-10-20 22:25:56,600 | INFO     | summary of transferred files:
[2025-10-20 18:27:13] 2025-10-20 22:25:56,600 | INFO     |  -- lfn=log.46771637._048308.job.log.tgz.1, status_code=0, status=transferred
[2025-10-20 18:27:13] 2025-10-20 22:25:56,601 | INFO     | stage-out finished correctly
[2025-10-20 18:27:13] 2025-10-20 22:25:56,888 | INFO     | time since job start (4617s) is within the limit (172800.0s)
[2025-10-20 18:27:13] 2025-10-20 22:25:58,004 | INFO     | PID=26591 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-20 18:27:13] 2025-10-20 22:25:59,004 | INFO     | time since job start (4620s) is within the limit (172800.0s)
[2025-10-20 18:27:13] 2025-10-20 22:26:00,162 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-20 18:27:13] 2025-10-20 22:26:01,010 | INFO     | time since job start (4622s) is within the limit (172800.0s)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,357 | WARNING  | process 535 can no longer be monitored (due to stat problems) - aborting
[2025-10-20 18:27:13] 2025-10-20 22:26:02,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852929883/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,358 | INFO     | reaping zombies for max 20 seconds
[2025-10-20 18:27:13] 2025-10-20 22:26:02,370 | INFO     | checking for looping job (in state=finished)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,370 | INFO     | using looping job limit: 7200 s
[2025-10-20 18:27:13] 2025-10-20 22:26:02,460 | INFO     | number of running child processes to parent process 535: 1
[2025-10-20 18:27:13] 2025-10-20 22:26:02,460 | INFO     | maximum number of monitored processes: 6
[2025-10-20 18:27:13] 2025-10-20 22:26:02,683 | INFO     | job 6852929883 has state=finished
[2025-10-20 18:27:13] 2025-10-20 22:26:02,683 | INFO     | preparing for final server update for job 6852929883 in state='finished'
[2025-10-20 18:27:13] 2025-10-20 22:26:02,745 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,746 | INFO     | this job has now completed (state=finished)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,746 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,746 | INFO     | log transfer has been attempted: DONE
[2025-10-20 18:27:13] 2025-10-20 22:26:02,746 | INFO     | job 6852929883 has finished - writing final server update
[2025-10-20 18:27:13] 2025-10-20 22:26:02,747 | INFO     | total number of processed events: 400 (read)
[2025-10-20 18:27:13] 2025-10-20 22:26:02,748 | INFO     | executing command: lscpu
[2025-10-20 18:27:13] 2025-10-20 22:26:02,771 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-20 18:27:13] 2025-10-20 22:26:03,017 | INFO     | time since job start (4624s) is within the limit (172800.0s)
[2025-10-20 18:27:13] 2025-10-20 22:26:04,963 | INFO     | monitor loop #344: job 0:6852929883 is in state 'finished'
[2025-10-20 18:27:13] 2025-10-20 22:26:04,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 18:27:13] 2025-10-20 22:26:05,022 | INFO     | time since job start (4626s) is within the limit (172800.0s)
[2025-10-20 18:27:13] 2025-10-20 22:26:05,023 | INFO     | 4627s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-20 18:27:13] 2025-10-20 22:26:07,028 | INFO     | time since job start (4628s) is within the limit (172800.0s)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,317 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-20 18:27:13] 2025-10-20 22:26:07,321 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-20 18:27:13] 2025-10-20 22:26:07,324 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852929883/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,325 | INFO     | extracted standard info from prmon json
[2025-10-20 18:27:13] 2025-10-20 22:26:07,325 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 18:27:13] 2025-10-20 22:26:07,325 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 18:27:13] 2025-10-20 22:26:07,326 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 18:27:13] 2025-10-20 22:26:07,326 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 18:27:13] 2025-10-20 22:26:07,328 | INFO     | fitting pss+swap vs Time
[2025-10-20 18:27:13] 2025-10-20 22:26:07,328 | INFO     | sum of square deviations: 101843770.0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | sum of deviations: -169751532.00000006
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | mean x: 1760996947.0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | mean y: 2685387.782608696
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | -- intersect: 2937886329.387313
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | intersect: 2937886329.387313
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | chi2: 0.019303394912403432
[2025-10-20 18:27:13] 2025-10-20 22:26:07,329 | INFO     | -- intersect: 2937886329.387313
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | current memory leak: -1.67 B/s (using 69 data points, chi2=0.02)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | ..............................
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | . Timing measurements:
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | . get job = 0 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | . initial setup = 2 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,330 | INFO     | . payload setup = 7 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,331 | INFO     | . stage-in = 0 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,331 | INFO     | . payload execution = 4589 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,331 | INFO     | . stage-out = 0 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,331 | INFO     | . log creation = 0 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,331 | INFO     | ..............................
[2025-10-20 18:27:13] 2025-10-20 22:26:07,413 | INFO     | 
[2025-10-20 18:27:13] 2025-10-20 22:26:07,413 | INFO     | job summary report
[2025-10-20 18:27:13] 2025-10-20 22:26:07,413 | INFO     | --------------------------------------------------
[2025-10-20 18:27:13] 2025-10-20 22:26:07,413 | INFO     | PanDA job id: 6852929883
[2025-10-20 18:27:13] 2025-10-20 22:26:07,413 | INFO     | task id: 46771637
[2025-10-20 18:27:13] 2025-10-20 22:26:07,414 | INFO     | errors: (none)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 18:27:13] 2025-10-20 22:26:07,414 | INFO     | pilot state: finished 
[2025-10-20 18:27:13] 2025-10-20 22:26:07,414 | INFO     | transexitcode: 0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,414 | INFO     | exeerrorcode: 0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,414 | INFO     | exeerrordiag: 
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | exitcode: 0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | exitmsg: OK
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | cpuconsumptiontime: 50233 s
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | nevents: 400
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | neventsw: 0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | pid: 535
[2025-10-20 18:27:13] 2025-10-20 22:26:07,415 | INFO     | pgrp: 535
[2025-10-20 18:27:13] 2025-10-20 22:26:07,416 | INFO     | corecount: 12
[2025-10-20 18:27:13] 2025-10-20 22:26:07,416 | INFO     | event service: False
[2025-10-20 18:27:13] 2025-10-20 22:26:07,416 | INFO     | sizes: {0: 2348878, 1: 2348906, 5: 2349168, 11: 2349224, 4600: 2375353, 4601: 2384351, 4604: 2384535, 4612: 2384729}
[2025-10-20 18:27:13] 2025-10-20 22:26:07,416 | INFO     | --------------------------------------------------
[2025-10-20 18:27:13] 2025-10-20 22:26:07,416 | INFO     | 
[2025-10-20 18:27:13] 2025-10-20 22:26:07,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-20 18:27:13] 2025-10-20 22:26:07,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,440 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 18:27:13] 2025-10-20 22:26:07,443 | INFO     | job 6852929883 has completed (purged errors)
[2025-10-20 18:27:13] 2025-10-20 22:26:07,443 | INFO     | overall cleanup function is called
[2025-10-20 18:27:13] 2025-10-20 22:26:08,449 | INFO     | --- collectZombieJob: --- 10, [535]
[2025-10-20 18:27:13] 2025-10-20 22:26:08,449 | INFO     | zombie collector waiting for pid 535
[2025-10-20 18:27:13] 2025-10-20 22:26:08,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 18:27:13] 2025-10-20 22:26:08,449 | INFO     | collected zombie processes
[2025-10-20 18:27:13] 2025-10-20 22:26:08,449 | INFO     | will attempt to kill all subprocesses of pid=535
[2025-10-20 18:27:13] 2025-10-20 22:26:08,542 | INFO     | process IDs to be killed: [535] (in reverse order)
[2025-10-20 18:27:13] 2025-10-20 22:26:08,589 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 18:27:13] 2025-10-20 22:26:08,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 18:27:13] 2025-10-20 22:26:08,593 | INFO     | did not find any defunct processes belonging to 535
[2025-10-20 18:27:13] 2025-10-20 22:26:08,597 | INFO     | did not find any defunct processes belonging to 535
[2025-10-20 18:27:13] 2025-10-20 22:26:08,597 | INFO     | ready for new job
[2025-10-20 18:27:13] 2025-10-20 22:26:08,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 18:27:13] 2025-10-20 22:26:08,599 | INFO     | ***************************************
[2025-10-20 18:27:13] 2025-10-20 22:26:08,599 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 18:27:13] 2025-10-20 22:26:08,599 | INFO     | ***************************************
[2025-10-20 18:27:13] 2025-10-20 22:26:08,599 | INFO     | 
[2025-10-20 18:27:13] 2025-10-20 22:26:08,599 | INFO     | architecture information:
[2025-10-20 18:27:13] 2025-10-20 22:26:08,600 | INFO     | executing command: cat /etc/os-release
[2025-10-20 18:27:13] 2025-10-20 22:26:08,613 | INFO     | cat /etc/os-release:
[2025-10-20 18:27:13] NAME="CentOS Linux"
[2025-10-20 18:27:13] VERSION="7 (Core)"
[2025-10-20 18:27:13] ID="centos"
[2025-10-20 18:27:13] ID_LIKE="rhel fedora"
[2025-10-20 18:27:13] VERSION_ID="7"
[2025-10-20 18:27:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 18:27:13] ANSI_COLOR="0;31"
[2025-10-20 18:27:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 18:27:13] HOME_URL="https://www.centos.org/"
[2025-10-20 18:27:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 18:27:13] 
[2025-10-20 18:27:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 18:27:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 18:27:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 18:27:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 18:27:13] 
[2025-10-20 18:27:13] 2025-10-20 22:26:08,614 | INFO     | ***************************************
[2025-10-20 18:27:13] 2025-10-20 22:26:09,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-20 18:27:13] 2025-10-20 22:26:09,133 | INFO     | sufficient remaining disk space (29334962176 B)
[2025-10-20 18:27:13] 2025-10-20 22:26:09,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 18:27:13] 2025-10-20 22:26:09,133 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 18:27:13] 2025-10-20 22:26:09,133 | INFO     | update_server=False
[2025-10-20 18:27:13] 2025-10-20 22:26:09,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 18:27:13] 2025-10-20 22:26:09,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 18:27:13] 2025-10-20 22:26:09,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 18:27:13] 2025-10-20 22:26:09,134 | INFO     | aborting loop
[2025-10-20 18:27:13] 2025-10-20 22:26:09,439 | INFO     | all data control threads have been joined
[2025-10-20 18:27:13] 2025-10-20 22:26:09,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 18:27:13] 2025-10-20 22:26:09,889 | INFO     | all payload control threads have been joined
[2025-10-20 18:27:13] 2025-10-20 22:26:09,996 | INFO     | all job control threads have been joined
[2025-10-20 18:27:13] 2025-10-20 22:26:10,139 | INFO     | [job] job monitor thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,139 | INFO     | [job] retrieve thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,140 | INFO     | [job] queue monitor thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,444 | INFO     | [data] control thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 18:27:13] 2025-10-20 22:26:10,846 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,894 | INFO     | [payload] control thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:10,917 | INFO     | [job] validate thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,002 | INFO     | [job] control thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,090 | INFO     | [payload] validate_post thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,450 | INFO     | [payload] failed_post thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,532 | INFO     | [data] copytool_in thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,537 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,605 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:11,704 | INFO     | [data] copytool_out thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:14,758 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 18:27:13] 2025-10-20 22:26:40,235 | INFO     | PID=26591 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-20 18:27:13] 2025-10-20 22:26:40,235 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 18:27:13] 2025-10-20 22:26:40,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 18:27:13] 2025-10-20 22:26:40,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 18:27:13] 2025-10-20 22:27:06,769 | INFO     | [monitor] cgroup control has ended
[2025-10-20 18:27:13] 2025-10-20 22:27:07,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008923825984)>', '<ExcThread(monitor, started 140008165971712)>']
[2025-10-20 18:27:13] 2025-10-20 22:27:08,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 18:27:13] 2025-10-20 22:27:08,370 | INFO     | [monitor] control thread has ended
[2025-10-20 18:27:13] 2025-10-20 22:27:12,819 | INFO     | all workflow threads have been joined
[2025-10-20 18:27:13] 2025-10-20 22:27:12,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 18:27:13] 2025-10-20 22:27:12,820 | INFO     | traces error code: 0
[2025-10-20 18:27:13] 2025-10-20 22:27:12,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 18:27:13] 2025-10-20 22:27:12,916 [wrapper] ==== pilot stdout END ====
[2025-10-20 18:27:13] 2025-10-20 22:27:12,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 18:27:13] 2025-10-20 22:27:12,923 [wrapper] pilotpid: 26591
[2025-10-20 18:27:13] 2025-10-20 22:27:12,927 [wrapper] Pilot exit status: 0
[2025-10-20 18:27:13] 2025-10-20 22:27:12,943 [wrapper] pandaids: 6852929883
[2025-10-20 18:27:13] 2025-10-20 22:27:12,984 [wrapper] cleanup supervisor_pilot 27132 26592
[2025-10-20 18:27:13] 2025-10-20 22:27:12,988 [wrapper] Test setup, not cleaning
[2025-10-20 18:27:13] 2025-10-20 22:27:12,992 [wrapper] apfmon messages muted
[2025-10-20 18:27:13] 2025-10-20 22:27:12,995 [wrapper] ==== wrapper stdout END ====
[2025-10-20 18:27:13] 2025-10-20 22:27:12,999 [wrapper] ==== wrapper stderr END ====
[2025-10-20 18:27:13]  *** Error codes and diagnostics ***
[2025-10-20 18:27:13]     "exeErrorCode": 0,
[2025-10-20 18:27:13]     "exeErrorDiag": "",
[2025-10-20 18:27:13]     "pilotErrorCode": 0,
[2025-10-20 18:27:13]     "pilotErrorDiag": "",
[2025-10-20 18:27:13]  *** Listing of results directory ***
[2025-10-20 18:27:13] total 432036
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 16:52 pilot3.tar.gz
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas      5112 Oct 20 17:05 queuedata.json
[2025-10-20 18:27:13] -rwx------ 1 boincer umatlas     36292 Oct 20 17:06 runpilot2-wrapper.sh
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas       100 Oct 20 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 18:27:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 20 17:08 run_atlas
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas       105 Oct 20 17:08 job.xml
[2025-10-20 18:27:13] -rw-r--r-- 2 boincer umatlas 228249055 Oct 20 17:08 EVNT.46771634._000063.pool.root.1
[2025-10-20 18:27:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 17:08 start_atlas.sh
[2025-10-20 18:27:13] drwxrwx--x 2 boincer umatlas      4096 Oct 20 17:08 shared
[2025-10-20 18:27:13] -rw-r--r-- 2 boincer umatlas    569678 Oct 20 17:08 input.tar.gz
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas         0 Oct 20 17:08 boinc_lockfile
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas      2559 Oct 20 17:08 pandaJob.out
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas    978846 Oct 20 17:08 agis_schedconf.cvmfs.json
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas   1560740 Oct 20 17:08 agis_ddmendpoints.agis.ALL.json
[2025-10-20 18:27:13] drwx------ 5 boincer umatlas      4096 Oct 20 17:08 pilot3
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas 208160632 Oct 20 18:25 HITS.46771637._048308.pool.root.1
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas       529 Oct 20 18:25 boinc_task_state.xml
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas      1047 Oct 20 18:25 memory_monitor_summary.json
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas    378626 Oct 20 18:25 log.46771637._048308.job.log.tgz.1
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas        95 Oct 20 18:26 pilot_heartbeat.json
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas      7856 Oct 20 18:26 heartbeat.json
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas      5952 Oct 20 18:27 init_data.xml
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas        27 Oct 20 18:27 wrapper_checkpoint.txt
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas      4746 Oct 20 18:27 pilotlog.txt
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 20 18:27 boinc_mmap_file
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas    668441 Oct 20 18:27 log.46771637._048308.job.log.1
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas       357 Oct 20 18:27 output.list
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas       620 Oct 20 18:27 runtime_log
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas   1064960 Oct 20 18:27 result.tar.gz
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas      8705 Oct 20 18:27 runtime_log.err
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas       660 Oct 20 18:27 Js7NDmRGCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdQdMDmwle4Km.diag
[2025-10-20 18:27:13] -rw-r--r-- 1 boincer umatlas     22295 Oct 20 18:27 stderr.txt
[2025-10-20 18:27:13] HITS file was successfully produced:
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas 208160632 Oct 20 18:25 shared/HITS.pool.root.1
[2025-10-20 18:27:13]  *** Contents of shared directory: ***
[2025-10-20 18:27:13] total 427804
[2025-10-20 18:27:13] -rw-r--r-- 2 boincer umatlas 228249055 Oct 20 17:08 ATLAS.root_0
[2025-10-20 18:27:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 17:08 start_atlas.sh
[2025-10-20 18:27:13] -rw-r--r-- 2 boincer umatlas    569678 Oct 20 17:08 input.tar.gz
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas 208160632 Oct 20 18:25 HITS.pool.root.1
[2025-10-20 18:27:13] -rw------- 1 boincer umatlas   1064960 Oct 20 18:27 result.tar.gz
18:27:14 (22901): run_atlas exited; CPU time 50207.738877
18:27:14 (22901): called boinc_finish(0)

</stderr_txt>
]]>

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