Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:42:33 (18336): wrapper (7.7.26015): starting
22:42:33 (18336): wrapper: running run_atlas (--nthreads 8)
[2025-10-20 22:42:33] Arguments: --nthreads 8
[2025-10-20 22:42:33] Threads: 8
[2025-10-20 22:42:33] Checking for CVMFS
[2025-10-20 22:42:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 22:42:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 22:42:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 22:42:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 22:42:40] 2.11.2.0 9054 119390 131912 151934 3 11 15262969 25165825 4632 130560 0 40504747 99.924 17184630 2317 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-20 22:42:40] CVMFS is ok
[2025-10-20 22:42:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 22:42:40] Checking for apptainer binary...
[2025-10-20 22:42:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 22:42:40] Running /usr/bin/apptainer --version
[2025-10-20 22:42:40] apptainer version 1.3.2-1.el7
[2025-10-20 22:42:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 22:43:06] cg-vwn272.simple-grid.lan
[2025-10-20 22:43:06] apptainer works
[2025-10-20 22:43:06] Set ATHENA_PROC_NUMBER=8
[2025-10-20 22:43:06] Set ATHENA_CORE_NUMBER=8
[2025-10-20 22:43:06] Starting ATLAS job with PandaID=6850267834
[2025-10-20 22:43:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 01:57:22]  *** The last 200 lines of the pilot log: ***
[2025-10-21 01:57:22] 2025-10-20 23:56:38,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 01:57:22] 2025-10-20 23:56:38,125 | INFO     | fitting pss+swap vs Time
[2025-10-21 01:57:22] 2025-10-20 23:56:38,126 | INFO     | sum of square deviations: 1748737904.5
[2025-10-21 01:57:22] 2025-10-20 23:56:38,127 | INFO     | sum of deviations: 50354403098.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,127 | INFO     | mean x: 1760999085.5
[2025-10-21 01:57:22] 2025-10-20 23:56:38,127 | INFO     | mean y: 2407574.797752809
[2025-10-21 01:57:22] 2025-10-20 23:56:38,128 | INFO     | -- intersect: -50705052690.284164
[2025-10-21 01:57:22] 2025-10-20 23:56:38,128 | INFO     | intersect: -50705052690.284164
[2025-10-21 01:57:22] 2025-10-20 23:56:38,128 | INFO     | chi2: 5.227320591379402
[2025-10-21 01:57:22] 2025-10-20 23:56:38,128 | INFO     | sum of square deviations: 1605470102.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,129 | INFO     | sum of deviations: 60301643574.00001
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | mean x: 1760998933.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | mean y: 2417879.6358381505
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | -- intersect: -66140906657.93958
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | intersect: -66140906657.93958
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | chi2: 4.507242273807094
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | current chi2=4.507242273807094 (change=13.775285157750226 %)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,130 | INFO     | right removable region: 172
[2025-10-21 01:57:22] 2025-10-20 23:56:38,131 | INFO     | sum of square deviations: 1605470102.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,132 | INFO     | sum of deviations: -4842177132.999999
[2025-10-21 01:57:22] 2025-10-20 23:56:38,132 | INFO     | mean x: 1760999238.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,132 | INFO     | mean y: 2466182.38150289
[2025-10-21 01:57:22] 2025-10-20 23:56:38,132 | INFO     | -- intersect: 5313726872.226491
[2025-10-21 01:57:22] 2025-10-20 23:56:38,138 | INFO     | intersect: 5313726872.226491
[2025-10-21 01:57:22] 2025-10-20 23:56:38,138 | INFO     | chi2: 1.240045518715137
[2025-10-21 01:57:22] 2025-10-20 23:56:38,138 | INFO     | current chi2=1.240045518715137 (change=76.27760729349279 %)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,139 | INFO     | sum of square deviations: 1470248962.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,140 | INFO     | sum of deviations: -17041247218.499996
[2025-10-21 01:57:22] 2025-10-20 23:56:38,140 | INFO     | mean x: 1760999390.5
[2025-10-21 01:57:22] 2025-10-20 23:56:38,140 | INFO     | mean y: 2479738.255952381
[2025-10-21 01:57:22] 2025-10-20 23:56:38,140 | INFO     | -- intersect: 20413734390.199936
[2025-10-21 01:57:22] 2025-10-20 23:56:38,140 | INFO     | intersect: 20413734390.199936
[2025-10-21 01:57:22] 2025-10-20 23:56:38,141 | INFO     | chi2: 0.8720570344157
[2025-10-21 01:57:22] 2025-10-20 23:56:38,141 | INFO     | current chi2=0.8720570344157 (change=29.675401325648526 %)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,141 | INFO     | sum of square deviations: 1342841922.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,142 | INFO     | sum of deviations: -11301536124.000002
[2025-10-21 01:57:22] 2025-10-20 23:56:38,142 | INFO     | mean x: 1760999543.0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,142 | INFO     | mean y: 2472856.7852760735
[2025-10-21 01:57:22] 2025-10-20 23:56:38,143 | INFO     | -- intersect: 14823279106.206192
[2025-10-21 01:57:22] 2025-10-20 23:56:38,143 | INFO     | intersect: 14823279106.206192
[2025-10-21 01:57:22] 2025-10-20 23:56:38,143 | INFO     | chi2: 0.8413418599616553
[2025-10-21 01:57:22] 2025-10-20 23:56:38,143 | INFO     | current chi2=0.8413418599616553 (change=3.522152020094034 %)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,143 | INFO     | left removable region: 30
[2025-10-21 01:57:22] 2025-10-20 23:56:38,143 | INFO     | sum of square deviations: 887813855.5
[2025-10-21 01:57:22] 2025-10-20 23:56:38,144 | INFO     | sum of deviations: 3051972343.5000005
[2025-10-21 01:57:22] 2025-10-20 23:56:38,144 | INFO     | mean x: 1760999817.5
[2025-10-21 01:57:22] 2025-10-20 23:56:38,144 | INFO     | mean y: 2481389.9929577466
[2025-10-21 01:57:22] 2025-10-20 23:56:38,145 | INFO     | -- intersect: -6051178064.208417
[2025-10-21 01:57:22] 2025-10-20 23:56:38,145 | INFO     | intersect: -6051178064.208417
[2025-10-21 01:57:22] 2025-10-20 23:56:38,145 | INFO     | chi2: 0.0001921342515422533
[2025-10-21 01:57:22] 2025-10-20 23:56:38,145 | INFO     | -- intersect: -6051178064.208417
[2025-10-21 01:57:22] 2025-10-20 23:56:38,145 | INFO     | current memory leak: 3.44 B/s (using 142 data points, chi2=0.00)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,146 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,146 | INFO     | ..............................
[2025-10-21 01:57:22] 2025-10-20 23:56:38,146 | INFO     | . Timing measurements:
[2025-10-21 01:57:22] 2025-10-20 23:56:38,146 | INFO     | . get job = 0 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,146 | INFO     | . initial setup = 6 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,147 | INFO     | . payload setup = 142 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,147 | INFO     | . stage-in = 0 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,147 | INFO     | . payload execution = 10955 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,147 | INFO     | . stage-out = 3 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,147 | INFO     | . log creation = 1 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,147 | INFO     | ..............................
[2025-10-21 01:57:22] 2025-10-20 23:56:38,283 | INFO     | 
[2025-10-21 01:57:22] 2025-10-20 23:56:38,283 | INFO     | job summary report
[2025-10-21 01:57:22] 2025-10-20 23:56:38,283 | INFO     | --------------------------------------------------
[2025-10-21 01:57:22] 2025-10-20 23:56:38,283 | INFO     | PanDA job id: 6850267834
[2025-10-21 01:57:22] 2025-10-20 23:56:38,283 | INFO     | task id: 46808902
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | errors: (none)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | pilot state: finished 
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | transexitcode: 0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | exeerrorcode: 0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | exeerrordiag: 
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | exitcode: 0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | exitmsg: OK
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | cpuconsumptiontime: 40438 s
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | nevents: 400
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | neventsw: 0
[2025-10-21 01:57:22] 2025-10-20 23:56:38,284 | INFO     | pid: 29037
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | pgrp: 29037
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | corecount: 8
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | event service: False
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | sizes: {0: 2348672, 1: 2348871, 12: 2348871, 23: 2348899, 33: 2348927, 44: 2348983, 55: 2349139, 66: 2349167, 76: 2349195, 84: 2349513, 87: 2349541, 11102: 2378489
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | --------------------------------------------------
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | 
[2025-10-21 01:57:22] 2025-10-20 23:56:38,285 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-21 01:57:22] 2025-10-20 23:56:38,490 | INFO     | time since job start (11386s) is within the limit (172800.0s)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,912 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | job 6850267834 has completed (purged errors)
[2025-10-21 01:57:22] 2025-10-20 23:56:38,914 | INFO     | overall cleanup function is called
[2025-10-21 01:57:22] 2025-10-20 23:56:39,922 | INFO     | --- collectZombieJob: --- 10, [29037]
[2025-10-21 01:57:22] 2025-10-20 23:56:39,922 | INFO     | zombie collector waiting for pid 29037
[2025-10-21 01:57:22] 2025-10-20 23:56:39,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 01:57:22] 2025-10-20 23:56:39,922 | INFO     | collected zombie processes
[2025-10-21 01:57:22] 2025-10-20 23:56:39,922 | INFO     | will attempt to kill all subprocesses of pid=29037
[2025-10-21 01:57:22] 2025-10-20 23:56:40,032 | INFO     | process IDs to be killed: [29037] (in reverse order)
[2025-10-21 01:57:22] 2025-10-20 23:56:40,970 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 01:57:22] 2025-10-20 23:56:40,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 01:57:22] 2025-10-20 23:56:40,973 | INFO     | did not find any defunct processes belonging to 29037
[2025-10-21 01:57:22] 2025-10-20 23:56:40,976 | INFO     | did not find any defunct processes belonging to 29037
[2025-10-21 01:57:22] 2025-10-20 23:56:40,976 | INFO     | ready for new job
[2025-10-21 01:57:22] 2025-10-20 23:56:40,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 01:57:22] 2025-10-20 23:56:40,978 | INFO     | ***************************************
[2025-10-21 01:57:22] 2025-10-20 23:56:40,978 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 01:57:22] 2025-10-20 23:56:40,978 | INFO     | ***************************************
[2025-10-21 01:57:22] 2025-10-20 23:56:40,978 | INFO     | 
[2025-10-21 01:57:22] 2025-10-20 23:56:40,979 | INFO     | pilot is running in a VM
[2025-10-21 01:57:22] 2025-10-20 23:56:40,979 | INFO     | architecture information:
[2025-10-21 01:57:22] 2025-10-20 23:56:40,985 | INFO     | executing command: cat /etc/os-release
[2025-10-21 01:57:22] 2025-10-20 23:56:41,150 | INFO     | cat /etc/os-release:
[2025-10-21 01:57:22] NAME="CentOS Linux"
[2025-10-21 01:57:22] VERSION="7 (Core)"
[2025-10-21 01:57:22] ID="centos"
[2025-10-21 01:57:22] ID_LIKE="rhel fedora"
[2025-10-21 01:57:22] VERSION_ID="7"
[2025-10-21 01:57:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 01:57:22] ANSI_COLOR="0;31"
[2025-10-21 01:57:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 01:57:22] HOME_URL="https://www.centos.org/"
[2025-10-21 01:57:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 01:57:22] 
[2025-10-21 01:57:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 01:57:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 01:57:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 01:57:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 01:57:22] 
[2025-10-21 01:57:22] 2025-10-20 23:56:41,150 | INFO     | ***************************************
[2025-10-21 01:57:22] 2025-10-20 23:56:41,654 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-21 01:57:22] 2025-10-20 23:56:41,929 | INFO     | sufficient remaining disk space (495930310656 B)
[2025-10-21 01:57:22] 2025-10-20 23:56:41,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 01:57:22] 2025-10-20 23:56:41,930 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 01:57:22] 2025-10-20 23:56:41,930 | INFO     | update_server=False
[2025-10-21 01:57:22] 2025-10-20 23:56:41,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 01:57:22] 2025-10-20 23:56:42,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 01:57:22] 2025-10-20 23:56:42,226 | INFO     | aborting loop
[2025-10-21 01:57:22] 2025-10-20 23:56:42,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 01:57:22] 2025-10-20 23:56:42,612 | INFO     | all data control threads have been joined
[2025-10-21 01:57:22] 2025-10-20 23:56:42,936 | INFO     | [job] retrieve thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,004 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,008 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,131 | INFO     | all job control threads have been joined
[2025-10-21 01:57:22] 2025-10-20 23:56:43,182 | INFO     | [payload] validate_post thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,220 | INFO     | all payload control threads have been joined
[2025-10-21 01:57:22] 2025-10-20 23:56:43,232 | INFO     | [job] job monitor thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 01:57:22] 2025-10-20 23:56:43,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 01:57:22] 2025-10-20 23:56:43,408 | INFO     | [payload] failed_post thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,528 | INFO     | [job] validate thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,618 | INFO     | [data] control thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,801 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:43,804 | INFO     | [data] copytool_in thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:44,137 | INFO     | [job] control thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:44,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:44,226 | INFO     | [payload] control thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:44,305 | INFO     | [job] queue monitor thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:45,382 | INFO     | [data] copytool_out thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:56:46,402 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 01:57:22] 2025-10-20 23:57:10,890 | INFO     | [monitor] cgroup control has ended
[2025-10-21 01:57:22] 2025-10-20 23:57:11,677 | INFO     | PID=22454 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 01:57:22] 2025-10-20 23:57:11,677 | INFO     | .. there are 9 such processes running
[2025-10-21 01:57:22] 2025-10-20 23:57:11,678 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 01:57:22] 2025-10-20 23:57:11,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 01:57:22] 2025-10-20 23:57:11,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 01:57:22] 2025-10-20 23:57:12,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505295882048)>', '<ExcThread(monitor, started 140504998070016)>']
[2025-10-21 01:57:22] 2025-10-20 23:57:12,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 01:57:22] 2025-10-20 23:57:12,685 | INFO     | [monitor] control thread has ended
[2025-10-21 01:57:22] 2025-10-20 23:57:17,546 | INFO     | all workflow threads have been joined
[2025-10-21 01:57:22] 2025-10-20 23:57:17,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 01:57:22] 2025-10-20 23:57:17,546 | INFO     | traces error code: 0
[2025-10-21 01:57:22] 2025-10-20 23:57:17,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 01:57:22] 2025-10-20 23:57:17,930 [wrapper] ==== pilot stdout END ====
[2025-10-21 01:57:22] 2025-10-20 23:57:18,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 01:57:22] 2025-10-20 23:57:18,138 [wrapper] pilotpid: 22454
[2025-10-21 01:57:22] 2025-10-20 23:57:18,279 [wrapper] Pilot exit status: 0
[2025-10-21 01:57:22] 2025-10-20 23:57:18,766 [wrapper] pandaids: 6850267834
[2025-10-21 01:57:22] 2025-10-20 23:57:19,409 [wrapper] cleanup supervisor_pilot 17693 22455
[2025-10-21 01:57:22] 2025-10-20 23:57:19,484 [wrapper] Test setup, not cleaning
[2025-10-21 01:57:22] 2025-10-20 23:57:19,589 [wrapper] apfmon messages muted
[2025-10-21 01:57:22] 2025-10-20 23:57:19,711 [wrapper] ==== wrapper stdout END ====
[2025-10-21 01:57:22] 2025-10-20 23:57:19,818 [wrapper] ==== wrapper stderr END ====
[2025-10-21 01:57:22]  *** Error codes and diagnostics ***
[2025-10-21 01:57:22]     "exeErrorCode": 0,
[2025-10-21 01:57:22]     "exeErrorDiag": "",
[2025-10-21 01:57:22]     "pilotErrorCode": 0,
[2025-10-21 01:57:22]     "pilotErrorDiag": "",
[2025-10-21 01:57:22]  *** Listing of results directory ***
[2025-10-21 01:57:22] total 341740
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc    557409 Oct 18 17:20 pilot3.tar.gz
[2025-10-21 01:57:22] -rwx------. 1 boinc boinc     36292 Oct 18 17:29 runpilot2-wrapper.sh
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc      5112 Oct 18 17:29 queuedata.json
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc       100 Oct 20 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 01:57:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 20 22:42 run_atlas
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc       105 Oct 20 22:42 job.xml
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc      6389 Oct 20 22:42 init_data.xml
[2025-10-21 01:57:22] -rw-r--r--. 2 boinc boinc 192477761 Oct 20 22:42 EVNT.46808900._000120.pool.root.1
[2025-10-21 01:57:22] -rw-r--r--. 2 boinc boinc     15120 Oct 20 22:42 start_atlas.sh
[2025-10-21 01:57:22] drwxrwx--x. 2 boinc boinc        68 Oct 20 22:42 shared
[2025-10-21 01:57:22] -rw-r--r--. 2 boinc boinc    569669 Oct 20 22:42 input.tar.gz
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc         0 Oct 20 22:42 boinc_lockfile
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc      2500 Oct 20 22:43 pandaJob.out
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc    978846 Oct 20 22:46 agis_schedconf.cvmfs.json
[2025-10-21 01:57:22] drwx------. 5 boinc boinc      4096 Oct 20 22:46 pilot3
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc 149698497 Oct 21 01:53 HITS.46808902._002934.pool.root.1
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc       531 Oct 21 01:54 boinc_task_state.xml
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc      1016 Oct 21 01:54 memory_monitor_summary.json
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc   1560740 Oct 21 01:54 agis_ddmendpoints.agis.ALL.json
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc    400621 Oct 21 01:54 log.46808902._002934.job.log.tgz.1
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc      7773 Oct 21 01:56 heartbeat.json
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc      8192 Oct 21 01:57 boinc_mmap_file
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc        28 Oct 21 01:57 wrapper_checkpoint.txt
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc        95 Oct 21 01:57 pilot_heartbeat.json
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc      4884 Oct 21 01:57 pilotlog.txt
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc   1537268 Oct 21 01:57 log.46808902._002934.job.log.1
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc       357 Oct 21 01:57 output.list
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc       620 Oct 21 01:57 runtime_log
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc   1955840 Oct 21 01:57 result.tar.gz
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc       657 Oct 21 01:57 ZyOLDmf3NU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwScMDmcRCNPo.diag
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc      8703 Oct 21 01:57 runtime_log.err
[2025-10-21 01:57:22] -rw-r--r--. 1 boinc boinc     20628 Oct 21 01:57 stderr.txt
[2025-10-21 01:57:22] HITS file was successfully produced:
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc 149698497 Oct 21 01:53 shared/HITS.pool.root.1
[2025-10-21 01:57:22]  *** Contents of shared directory: ***
[2025-10-21 01:57:22] total 336648
[2025-10-21 01:57:22] -rw-r--r--. 2 boinc boinc 192477761 Oct 20 22:42 ATLAS.root_0
[2025-10-21 01:57:22] -rw-r--r--. 2 boinc boinc     15120 Oct 20 22:42 start_atlas.sh
[2025-10-21 01:57:22] -rw-r--r--. 2 boinc boinc    569669 Oct 20 22:42 input.tar.gz
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc 149698497 Oct 21 01:53 HITS.pool.root.1
[2025-10-21 01:57:22] -rw-------. 1 boinc boinc   1955840 Oct 21 01:57 result.tar.gz
01:57:23 (18336): run_atlas exited; CPU time 40575.549484
01:57:23 (18336): called boinc_finish(0)

</stderr_txt>
]]>

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