Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:22:18 (78782): wrapper (7.7.26015): starting
06:22:18 (78782): wrapper: running run_atlas (--nthreads 9)
[2025-10-20 06:22:18] Arguments: --nthreads 9
[2025-10-20 06:22:18] Threads: 9
[2025-10-20 06:22:18] Checking for CVMFS
[2025-10-20 06:22:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 06:22:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 06:22:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 06:22:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 06:22:19] 2.13.2.0 3310087 30066 228824 151920 0 412 27526637 40960001 11285 16776704 0 67017654 99.783 38197157 40854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 06:22:19] CVMFS is ok
[2025-10-20 06:22:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 06:22:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 06:22:19] Further information can be found at the LHC@home message board.
[2025-10-20 06:22:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 06:22:19] Checking for apptainer binary...
[2025-10-20 06:22:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 06:22:19] Running /usr/bin/apptainer --version
[2025-10-20 06:22:19] apptainer version 1.4.3-1.el9
[2025-10-20 06:22:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 06:22:19] c-206-38.aglt2.org
[2025-10-20 06:22:19] apptainer works
[2025-10-20 06:22:19] Set ATHENA_PROC_NUMBER=9
[2025-10-20 06:22:19] Set ATHENA_CORE_NUMBER=9
[2025-10-20 06:22:19] Starting ATLAS job with PandaID=6852454271
[2025-10-20 06:22:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 08:41:01]  *** The last 200 lines of the pilot log: ***
[2025-10-20 08:41:01] 2025-10-20 12:27:56,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-20 08:41:01] 2025-10-20 12:27:56,771 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3277.958453124999
[2025-10-20 08:41:01] 2025-10-20 12:27:56,778 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6852454271/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,778 | INFO     | extracted standard info from prmon json
[2025-10-20 08:41:01] 2025-10-20 12:27:56,778 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 08:41:01] 2025-10-20 12:27:56,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 08:41:01] 2025-10-20 12:27:56,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 08:41:01] 2025-10-20 12:27:56,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 08:41:01] 2025-10-20 12:27:56,781 | INFO     | fitting pss+swap vs Time
[2025-10-20 08:41:01] 2025-10-20 12:27:56,781 | INFO     | sum of square deviations: 577001086.8292699
[2025-10-20 08:41:01] 2025-10-20 12:27:56,781 | INFO     | sum of deviations: 2436485276.804876
[2025-10-20 08:41:01] 2025-10-20 12:27:56,781 | INFO     | mean x: 1760959496.097561
[2025-10-20 08:41:01] 2025-10-20 12:27:56,781 | INFO     | mean y: 2581045.6829268294
[2025-10-20 08:41:01] 2025-10-20 12:27:56,782 | INFO     | -- intersect: -7433370087.214993
[2025-10-20 08:41:01] 2025-10-20 12:27:56,782 | INFO     | intersect: -7433370087.214993
[2025-10-20 08:41:01] 2025-10-20 12:27:56,782 | INFO     | chi2: 1.1932286014102316
[2025-10-20 08:41:01] 2025-10-20 12:27:56,782 | INFO     | sum of square deviations: 509459294.27965957
[2025-10-20 08:41:01] 2025-10-20 12:27:56,782 | INFO     | sum of deviations: 3009269829.0084767
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | mean x: 1760959343.6016948
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | mean y: 2582340.9576271186
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | -- intersect: -10399037341.54097
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | intersect: -10399037341.54097
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | chi2: 1.1947102816606974
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | current chi2=1.1947102816606974 (change=-0.1241740475140018 %)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | right removable region: 117
[2025-10-20 08:41:01] 2025-10-20 12:27:56,783 | INFO     | sum of square deviations: 509451974.27965957
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | sum of deviations: -11648843381.669498
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | mean x: 1760959648.6016948
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | mean y: 2612047.3474576273
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | -- intersect: 40267728650.35108
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | intersect: 40267728650.35108
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | chi2: 0.024275686647311667
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | current chi2=0.024275686647311667 (change=97.96554603044034 %)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,784 | INFO     | sum of square deviations: 447398777.929203
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | sum of deviations: -11375268447.318579
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | mean x: 1760959801.097345
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | mean y: 2611362.9380530976
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | -- intersect: 44775622489.91262
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | intersect: 44775622489.91262
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | chi2: 0.02074993508125843
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | current chi2=0.02074993508125843 (change=14.523797482135006 %)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,785 | INFO     | left removable region: 20
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | sum of square deviations: 282999626.16494787
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | sum of deviations: -8851389818.371134
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | mean x: 1760959923.0927835
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | mean y: 2610818.0412371135
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | -- intersect: 55080219735.93481
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | intersect: 55080219735.93481
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | chi2: 0.016613333063813775
[2025-10-20 08:41:01] 2025-10-20 12:27:56,786 | INFO     | -- intersect: 55080219735.93481
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | current memory leak: -31.28 B/s (using 97 data points, chi2=0.02)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | could have reported an average CPU frequency of 3272 MHz (8 samples)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | ..............................
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | . Timing measurements:
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | . get job = 0 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | . initial setup = 2 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | . payload setup = 5 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | . stage-in = 0 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,787 | INFO     | . payload execution = 7493 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,788 | INFO     | . stage-out = 0 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,788 | INFO     | . log creation = 0 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,788 | INFO     | ..............................
[2025-10-20 08:41:01] 2025-10-20 12:27:56,870 | INFO     | 
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | job summary report
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | --------------------------------------------------
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | PanDA job id: 6852454271
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | task id: 46808902
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | errors: (none)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | pilot state: finished 
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | transexitcode: 0
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | exeerrorcode: 0
[2025-10-20 08:41:01] 2025-10-20 12:27:56,871 | INFO     | exeerrordiag: 
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | exitcode: 0
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | exitmsg: OK
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | cpuconsumptiontime: 25697 s
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | nevents: 400
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | neventsw: 0
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | pid: 118209
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | pgrp: 118209
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | corecount: 9
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | event service: False
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | sizes: {0: 2348852, 5: 2349114, 11: 2349170, 7502: 2376927, 7503: 2376926, 7504: 2385980, 7505: 2386164, 7512: 2386358}
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | --------------------------------------------------
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | 
[2025-10-20 08:41:01] 2025-10-20 12:27:56,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 08:41:01] 2025-10-20 12:27:56,897 | INFO     | job 6852454271 has completed (purged errors)
[2025-10-20 08:41:01] 2025-10-20 12:27:56,898 | INFO     | overall cleanup function is called
[2025-10-20 08:41:01] 2025-10-20 12:27:57,906 | INFO     | --- collectZombieJob: --- 10, [118209]
[2025-10-20 08:41:01] 2025-10-20 12:27:57,906 | INFO     | zombie collector waiting for pid 118209
[2025-10-20 08:41:01] 2025-10-20 12:27:57,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 08:41:01] 2025-10-20 12:27:57,906 | INFO     | collected zombie processes
[2025-10-20 08:41:01] 2025-10-20 12:27:57,906 | INFO     | will attempt to kill all subprocesses of pid=118209
[2025-10-20 08:41:01] 2025-10-20 12:27:58,230 | INFO     | process IDs to be killed: [118209] (in reverse order)
[2025-10-20 08:41:01] 2025-10-20 12:27:58,387 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 08:41:01] 2025-10-20 12:27:58,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 08:41:01] 2025-10-20 12:27:58,402 | INFO     | did not find any defunct processes belonging to 118209
[2025-10-20 08:41:01] 2025-10-20 12:27:58,417 | INFO     | did not find any defunct processes belonging to 118209
[2025-10-20 08:41:01] 2025-10-20 12:27:58,417 | INFO     | ready for new job
[2025-10-20 08:41:01] 2025-10-20 12:27:58,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 08:41:01] 2025-10-20 12:27:58,420 | INFO     | ***************************************
[2025-10-20 08:41:01] 2025-10-20 12:27:58,420 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 08:41:01] 2025-10-20 12:27:58,420 | INFO     | ***************************************
[2025-10-20 08:41:01] 2025-10-20 12:27:58,420 | INFO     | 
[2025-10-20 08:41:01] 2025-10-20 12:27:58,427 | INFO     | architecture information:
[2025-10-20 08:41:01] 2025-10-20 12:27:58,431 | INFO     | executing command: cat /etc/os-release
[2025-10-20 08:41:01] 2025-10-20 12:27:58,455 | INFO     | cat /etc/os-release:
[2025-10-20 08:41:01] NAME="CentOS Linux"
[2025-10-20 08:41:01] VERSION="7 (Core)"
[2025-10-20 08:41:01] ID="centos"
[2025-10-20 08:41:01] ID_LIKE="rhel fedora"
[2025-10-20 08:41:01] VERSION_ID="7"
[2025-10-20 08:41:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 08:41:01] ANSI_COLOR="0;31"
[2025-10-20 08:41:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 08:41:01] HOME_URL="https://www.centos.org/"
[2025-10-20 08:41:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 08:41:01] 
[2025-10-20 08:41:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 08:41:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 08:41:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 08:41:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 08:41:01] 
[2025-10-20 08:41:01] 2025-10-20 12:27:58,455 | INFO     | ***************************************
[2025-10-20 08:41:01] 2025-10-20 12:27:58,958 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-20 08:41:01] 2025-10-20 12:27:58,990 | INFO     | sufficient remaining disk space (85085650944 B)
[2025-10-20 08:41:01] 2025-10-20 12:27:58,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 08:41:01] 2025-10-20 12:27:58,990 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 08:41:01] 2025-10-20 12:27:58,990 | INFO     | update_server=False
[2025-10-20 08:41:01] 2025-10-20 12:27:58,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 08:41:01] 2025-10-20 12:27:59,169 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-20 08:41:01] 2025-10-20 12:27:59,169 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-20 08:41:01] 2025-10-20 12:27:59,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 08:41:01] 2025-10-20 12:27:59,169 | INFO     | will abort loop
[2025-10-20 08:41:01] 2025-10-20 12:27:59,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 08:41:01] 2025-10-20 12:27:59,514 | INFO     | all payload control threads have been joined
[2025-10-20 08:41:01] 2025-10-20 12:27:59,642 | INFO     | all job control threads have been joined
[2025-10-20 08:41:01] 2025-10-20 12:27:59,831 | INFO     | all data control threads have been joined
[2025-10-20 08:41:01] 2025-10-20 12:27:59,996 | INFO     | [job] retrieve thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,174 | INFO     | [job] job monitor thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,203 | INFO     | [job] validate thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,396 | INFO     | [payload] failed_post thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,519 | INFO     | [payload] control thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,528 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,648 | INFO     | [job] control thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,812 | INFO     | [data] copytool_in thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,837 | INFO     | [data] control thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:00,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 08:41:01] 2025-10-20 12:28:00,929 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:01,183 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:01,416 | INFO     | [payload] validate_post thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:01,433 | INFO     | [data] copytool_out thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:01,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 08:41:01] 2025-10-20 12:28:02,891 | INFO     | [job] queue monitor thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:04,855 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:09,580 | INFO     | job.realtimelogging is not enabled
[2025-10-20 08:41:01] 2025-10-20 12:28:10,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 08:41:01] 2025-10-20 12:28:29,809 | INFO     | PID=90848 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-20 08:41:01] 2025-10-20 12:28:29,810 | INFO     | .. there are 15 such processes running
[2025-10-20 08:41:01] 2025-10-20 12:28:29,810 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 08:41:01] 2025-10-20 12:28:29,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 08:41:01] 2025-10-20 12:28:29,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 08:41:01] 2025-10-20 12:28:42,266 | INFO     | [monitor] cgroup control has ended
[2025-10-20 08:41:01] 2025-10-20 12:28:43,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199136388928)>', '<ExcThread(monitor, started 140198126020352)>']
[2025-10-20 08:41:01] 2025-10-20 12:28:43,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 08:41:01] 2025-10-20 12:28:43,880 | INFO     | [monitor] control thread has ended
[2025-10-20 08:41:01] 2025-10-20 12:28:48,791 | INFO     | all workflow threads have been joined
[2025-10-20 08:41:01] 2025-10-20 12:28:48,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 08:41:01] 2025-10-20 12:28:48,791 | INFO     | traces error code: 0
[2025-10-20 08:41:01] 2025-10-20 12:28:48,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 08:41:01] 2025-10-20 12:28:49,111 [wrapper] ==== pilot stdout END ====
[2025-10-20 08:41:01] 2025-10-20 12:28:49,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 08:41:01] 2025-10-20 12:28:49,129 [wrapper] pilotpid: 90848
[2025-10-20 08:41:01] 2025-10-20 12:28:49,139 [wrapper] Pilot exit status: 0
[2025-10-20 08:41:01] 2025-10-20 12:28:49,231 [wrapper] pandaids: 6852454271
[2025-10-20 08:41:01] 2025-10-20 12:28:49,457 [wrapper] cleanup supervisor_pilot  503271 90849
[2025-10-20 08:41:01] 2025-10-20 12:28:49,463 [wrapper] Test setup, not cleaning
[2025-10-20 08:41:01] 2025-10-20 12:28:49,468 [wrapper] apfmon messages muted
[2025-10-20 08:41:01] 2025-10-20 12:28:49,472 [wrapper] ==== wrapper stdout END ====
[2025-10-20 08:41:01] 2025-10-20 12:28:49,475 [wrapper] ==== wrapper stderr END ====
[2025-10-20 08:41:01]  *** Error codes and diagnostics ***
[2025-10-20 08:41:01]     "exeErrorCode": 0,
[2025-10-20 08:41:01]     "exeErrorDiag": "",
[2025-10-20 08:41:01]     "pilotErrorCode": 0,
[2025-10-20 08:41:01]     "pilotErrorDiag": "",
[2025-10-20 08:41:01]  *** Listing of results directory ***
[2025-10-20 08:41:01] total 337872
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 06:17 pilot3.tar.gz
[2025-10-20 08:41:01] -rwx------. 1 boincer umatlas     36292 Oct 20 06:21 runpilot2-wrapper.sh
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 06:21 queuedata.json
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas       100 Oct 20 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 08:41:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 06:22 run_atlas
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas       105 Oct 20 06:22 job.xml
[2025-10-20 08:41:01] -rw-r--r--. 2 boincer umatlas 191724279 Oct 20 06:22 EVNT.46808900._000253.pool.root.1
[2025-10-20 08:41:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 06:22 start_atlas.sh
[2025-10-20 08:41:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 06:22 shared
[2025-10-20 08:41:01] -rw-r--r--. 2 boincer umatlas    569672 Oct 20 06:22 input.tar.gz
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas         0 Oct 20 06:22 boinc_lockfile
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas      2506 Oct 20 06:22 pandaJob.out
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas    976379 Oct 20 06:22 agis_schedconf.cvmfs.json
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas   1560740 Oct 20 06:22 agis_ddmendpoints.agis.ALL.json
[2025-10-20 08:41:01] drwx------. 5 boincer umatlas      4096 Oct 20 06:22 pilot3
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas 147480791 Oct 20 08:27 HITS.46808902._006430.pool.root.1
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas       529 Oct 20 08:27 boinc_task_state.xml
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas      1033 Oct 20 08:27 memory_monitor_summary.json
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas    391464 Oct 20 08:27 log.46808902._006430.job.log.tgz.1
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas        95 Oct 20 08:27 pilot_heartbeat.json
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas      7771 Oct 20 08:27 heartbeat.json
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas      5080 Oct 20 08:28 pilotlog.txt
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas   1048505 Oct 20 08:28 log.46808902._006430.job.log.1
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas       357 Oct 20 08:28 output.list
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas       620 Oct 20 08:28 runtime_log
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas   1454080 Oct 20 08:28 result.tar.gz
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas      8703 Oct 20 08:28 runtime_log.err
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas       652 Oct 20 08:28 8pCODmoB2U8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjKdMDmv2FEom.diag
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas      6900 Oct 20 08:40 init_data.xml
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas        27 Oct 20 08:40 wrapper_checkpoint.txt
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 08:41 boinc_mmap_file
[2025-10-20 08:41:01] -rw-r--r--. 1 boincer umatlas     21144 Oct 20 08:41 stderr.txt
[2025-10-20 08:41:01] HITS file was successfully produced:
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas 147480791 Oct 20 08:27 shared/HITS.pool.root.1
[2025-10-20 08:41:01]  *** Contents of shared directory: ***
[2025-10-20 08:41:01] total 333260
[2025-10-20 08:41:01] -rw-r--r--. 2 boincer umatlas 191724279 Oct 20 06:22 ATLAS.root_0
[2025-10-20 08:41:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 06:22 start_atlas.sh
[2025-10-20 08:41:01] -rw-r--r--. 2 boincer umatlas    569672 Oct 20 06:22 input.tar.gz
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas 147480791 Oct 20 08:27 HITS.pool.root.1
[2025-10-20 08:41:01] -rw-------. 1 boincer umatlas   1454080 Oct 20 08:28 result.tar.gz
08:41:03 (78782): run_atlas exited; CPU time 25769.154757
08:41:03 (78782): called boinc_finish(0)

</stderr_txt>
]]>

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