Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:21 (3894139): wrapper (7.7.26015): starting
06:18:21 (3894139): wrapper: running run_atlas (--nthreads 11)
[2025-10-20 06:18:21] Arguments: --nthreads 11
[2025-10-20 06:18:21] Threads: 11
[2025-10-20 06:18:21] Checking for CVMFS
[2025-10-20 06:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 06:18:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 06:18:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 06:18:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 06:18:22] 2.13.2.0 128560 127366 137176 151920 0 13 33309893 39288832 8602 16776704 1 83657811 99.607 86094710 36190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 06:18:22] CVMFS is ok
[2025-10-20 06:18:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 06:18:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 06:18:22] Further information can be found at the LHC@home message board.
[2025-10-20 06:18:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 06:18:22] Checking for apptainer binary...
[2025-10-20 06:18:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 06:18:22] Running /usr/bin/apptainer --version
[2025-10-20 06:18:22] apptainer version 1.4.3-1.el9
[2025-10-20 06:18:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 06:18:22] c-211-5.aglt2.org
[2025-10-20 06:18:22] apptainer works
[2025-10-20 06:18:22] Set ATHENA_PROC_NUMBER=11
[2025-10-20 06:18:22] Set ATHENA_CORE_NUMBER=11
[2025-10-20 06:18:22] Starting ATLAS job with PandaID=6852454422
[2025-10-20 06:18:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 09:25:11]  *** The last 200 lines of the pilot log: ***
[2025-10-20 09:25:11] 2025-10-20 13:24:28,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 09:25:11] 2025-10-20 13:24:28,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 09:25:11] 2025-10-20 13:24:28,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 09:25:11] 2025-10-20 13:24:28,597 | INFO     | fitting pss+swap vs Time
[2025-10-20 09:25:11] 2025-10-20 13:24:28,598 | INFO     | sum of square deviations: 1869490994.373629
[2025-10-20 09:25:11] 2025-10-20 13:24:28,599 | INFO     | sum of deviations: -61768650811.14286
[2025-10-20 09:25:11] 2025-10-20 13:24:28,599 | INFO     | mean x: 1760961089.1758242
[2025-10-20 09:25:11] 2025-10-20 13:24:28,607 | INFO     | mean y: 2744280.785714286
[2025-10-20 09:25:11] 2025-10-20 13:24:28,607 | INFO     | -- intersect: 58185528223.938805
[2025-10-20 09:25:11] 2025-10-20 13:24:28,608 | INFO     | intersect: 58185528223.938805
[2025-10-20 09:25:11] 2025-10-20 13:24:28,608 | INFO     | chi2: 2.796393595282208
[2025-10-20 09:25:11] 2025-10-20 13:24:28,608 | INFO     | sum of square deviations: 1719645071.9096065
[2025-10-20 09:25:11] 2025-10-20 13:24:28,609 | INFO     | sum of deviations: -45263642772.72318
[2025-10-20 09:25:11] 2025-10-20 13:24:28,610 | INFO     | mean x: 1760960936.6892655
[2025-10-20 09:25:11] 2025-10-20 13:24:28,610 | INFO     | mean y: 2760782.514124294
[2025-10-20 09:25:11] 2025-10-20 13:24:28,610 | INFO     | -- intersect: 46353899210.46338
[2025-10-20 09:25:11] 2025-10-20 13:24:28,610 | INFO     | intersect: 46353899210.46338
[2025-10-20 09:25:11] 2025-10-20 13:24:28,610 | INFO     | chi2: 1.983326890878722
[2025-10-20 09:25:11] 2025-10-20 13:24:28,610 | INFO     | current chi2=1.983326890878722 (change=29.07554593799706 %)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,611 | INFO     | sum of square deviations: 1578020821.2790728
[2025-10-20 09:25:11] 2025-10-20 13:24:28,612 | INFO     | sum of deviations: -41800504143.04652
[2025-10-20 09:25:11] 2025-10-20 13:24:28,613 | INFO     | mean x: 1760960784.1976745
[2025-10-20 09:25:11] 2025-10-20 13:24:28,613 | INFO     | mean y: 2764512.38372093
[2025-10-20 09:25:11] 2025-10-20 13:24:28,613 | INFO     | -- intersect: 46649201341.98978
[2025-10-20 09:25:11] 2025-10-20 13:24:28,613 | INFO     | intersect: 46649201341.98978
[2025-10-20 09:25:11] 2025-10-20 13:24:28,613 | INFO     | chi2: 1.9823893009641727
[2025-10-20 09:25:11] 2025-10-20 13:24:28,614 | INFO     | current chi2=1.9823893009641727 (change=0.047273594628366764 %)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,614 | INFO     | right removable region: 171
[2025-10-20 09:25:11] 2025-10-20 13:24:28,614 | INFO     | sum of square deviations: 1719580899.5254283
[2025-10-20 09:25:11] 2025-10-20 13:24:28,619 | INFO     | sum of deviations: -94105717267.40675
[2025-10-20 09:25:11] 2025-10-20 13:24:28,619 | INFO     | mean x: 1760961241.6949153
[2025-10-20 09:25:11] 2025-10-20 13:24:28,620 | INFO     | mean y: 2776805.2146892655
[2025-10-20 09:25:11] 2025-10-20 13:24:28,620 | INFO     | -- intersect: 96373073064.92416
[2025-10-20 09:25:11] 2025-10-20 13:24:28,620 | INFO     | intersect: 96373073064.92416
[2025-10-20 09:25:11] 2025-10-20 13:24:28,620 | INFO     | chi2: 1.153098933609149
[2025-10-20 09:25:11] 2025-10-20 13:24:28,620 | INFO     | current chi2=1.153098933609149 (change=58.764784200817054 %)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,621 | INFO     | sum of square deviations: 1577914314.4651165
[2025-10-20 09:25:11] 2025-10-20 13:24:28,622 | INFO     | sum of deviations: -93314281786.4186
[2025-10-20 09:25:11] 2025-10-20 13:24:28,622 | INFO     | mean x: 1760961394.2093024
[2025-10-20 09:25:11] 2025-10-20 13:24:28,622 | INFO     | mean y: 2775877.261627907
[2025-10-20 09:25:11] 2025-10-20 13:24:28,622 | INFO     | -- intersect: 104142047729.89944
[2025-10-20 09:25:11] 2025-10-20 13:24:28,622 | INFO     | intersect: 104142047729.89944
[2025-10-20 09:25:11] 2025-10-20 13:24:28,623 | INFO     | chi2: 1.105198871021128
[2025-10-20 09:25:11] 2025-10-20 13:24:28,623 | INFO     | current chi2=1.105198871021128 (change=4.154028868806248 %)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,623 | INFO     | left removable region: 20
[2025-10-20 09:25:11] 2025-10-20 13:24:28,623 | INFO     | sum of square deviations: 1067717315.178805
[2025-10-20 09:25:11] 2025-10-20 13:24:28,624 | INFO     | sum of deviations: -62339045145.43048
[2025-10-20 09:25:11] 2025-10-20 13:24:28,624 | INFO     | mean x: 1760961363.7086093
[2025-10-20 09:25:11] 2025-10-20 13:24:28,624 | INFO     | mean y: 2787128.331125828
[2025-10-20 09:25:11] 2025-10-20 13:24:28,624 | INFO     | -- intersect: 102817126083.962
[2025-10-20 09:25:11] 2025-10-20 13:24:28,624 | INFO     | intersect: 102817126083.962
[2025-10-20 09:25:11] 2025-10-20 13:24:28,625 | INFO     | chi2: 0.2389671630166104
[2025-10-20 09:25:11] 2025-10-20 13:24:28,625 | INFO     | -- intersect: 102817126083.962
[2025-10-20 09:25:11] 2025-10-20 13:24:28,625 | INFO     | current memory leak: -58.39 B/s (using 151 data points, chi2=0.24)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | could have reported an average CPU frequency of 2600 MHz (10 samples)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | ..............................
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . Timing measurements:
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . get job = 0 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . initial setup = 4 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . payload setup = 12 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . stage-in = 0 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . payload execution = 11078 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . stage-out = 3 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,626 | INFO     | . log creation = 0 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,627 | INFO     | ..............................
[2025-10-20 09:25:11] 2025-10-20 13:24:28,732 | INFO     | 
[2025-10-20 09:25:11] 2025-10-20 13:24:28,736 | INFO     | job summary report
[2025-10-20 09:25:11] 2025-10-20 13:24:28,736 | INFO     | --------------------------------------------------
[2025-10-20 09:25:11] 2025-10-20 13:24:28,736 | INFO     | PanDA job id: 6852454422
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | task id: 46808902
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | errors: (none)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | pilot state: finished 
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | transexitcode: 0
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | exeerrorcode: 0
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | exeerrordiag: 
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | exitcode: 0
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | exitmsg: OK
[2025-10-20 09:25:11] 2025-10-20 13:24:28,737 | INFO     | cpuconsumptiontime: 39954 s
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | nevents: 400
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | neventsw: 0
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | pid: 3908554
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | pgrp: 3908554
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | corecount: 11
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | event service: False
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | sizes: {0: 2348625, 1: 2348880, 2: 2348880, 7: 2349170, 12: 2349198, 11094: 2378461, 11098: 2387515, 11120: 2387653}
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | --------------------------------------------------
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | 
[2025-10-20 09:25:11] 2025-10-20 13:24:28,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-20 09:25:11] 2025-10-20 13:24:28,822 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 09:25:11] 2025-10-20 13:24:28,826 | INFO     | job 6852454422 has completed (purged errors)
[2025-10-20 09:25:11] 2025-10-20 13:24:28,827 | INFO     | overall cleanup function is called
[2025-10-20 09:25:11] 2025-10-20 13:24:29,837 | INFO     | --- collectZombieJob: --- 10, [3908554]
[2025-10-20 09:25:11] 2025-10-20 13:24:29,837 | INFO     | zombie collector waiting for pid 3908554
[2025-10-20 09:25:11] 2025-10-20 13:24:29,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 09:25:11] 2025-10-20 13:24:29,838 | INFO     | collected zombie processes
[2025-10-20 09:25:11] 2025-10-20 13:24:29,838 | INFO     | will attempt to kill all subprocesses of pid=3908554
[2025-10-20 09:25:11] 2025-10-20 13:24:30,139 | INFO     | process IDs to be killed: [3908554] (in reverse order)
[2025-10-20 09:25:11] 2025-10-20 13:24:30,208 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 09:25:11] 2025-10-20 13:24:30,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 09:25:11] 2025-10-20 13:24:30,229 | INFO     | did not find any defunct processes belonging to 3908554
[2025-10-20 09:25:11] 2025-10-20 13:24:30,246 | INFO     | did not find any defunct processes belonging to 3908554
[2025-10-20 09:25:11] 2025-10-20 13:24:30,246 | INFO     | ready for new job
[2025-10-20 09:25:11] 2025-10-20 13:24:30,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 09:25:11] 2025-10-20 13:24:30,248 | INFO     | ***************************************
[2025-10-20 09:25:11] 2025-10-20 13:24:30,250 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 09:25:11] 2025-10-20 13:24:30,250 | INFO     | ***************************************
[2025-10-20 09:25:11] 2025-10-20 13:24:30,250 | INFO     | 
[2025-10-20 09:25:11] 2025-10-20 13:24:30,252 | INFO     | architecture information:
[2025-10-20 09:25:11] 2025-10-20 13:24:30,253 | INFO     | executing command: cat /etc/os-release
[2025-10-20 09:25:11] 2025-10-20 13:24:30,288 | INFO     | cat /etc/os-release:
[2025-10-20 09:25:11] NAME="CentOS Linux"
[2025-10-20 09:25:11] VERSION="7 (Core)"
[2025-10-20 09:25:11] ID="centos"
[2025-10-20 09:25:11] ID_LIKE="rhel fedora"
[2025-10-20 09:25:11] VERSION_ID="7"
[2025-10-20 09:25:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 09:25:11] ANSI_COLOR="0;31"
[2025-10-20 09:25:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 09:25:11] HOME_URL="https://www.centos.org/"
[2025-10-20 09:25:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 09:25:11] 
[2025-10-20 09:25:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 09:25:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 09:25:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 09:25:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 09:25:11] 
[2025-10-20 09:25:11] 2025-10-20 13:24:30,289 | INFO     | ***************************************
[2025-10-20 09:25:11] 2025-10-20 13:24:30,792 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-20 09:25:11] 2025-10-20 13:24:30,817 | INFO     | sufficient remaining disk space (53951332352 B)
[2025-10-20 09:25:11] 2025-10-20 13:24:30,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 09:25:11] 2025-10-20 13:24:30,817 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 09:25:11] 2025-10-20 13:24:30,817 | INFO     | update_server=False
[2025-10-20 09:25:11] 2025-10-20 13:24:30,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 09:25:11] 2025-10-20 13:24:30,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 09:25:11] 2025-10-20 13:24:30,818 | INFO     | aborting loop
[2025-10-20 09:25:11] 2025-10-20 13:24:30,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 09:25:11] 2025-10-20 13:24:30,998 | INFO     | all payload control threads have been joined
[2025-10-20 09:25:11] 2025-10-20 13:24:31,824 | INFO     | [job] retrieve thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:31,825 | INFO     | [job] job monitor thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:31,841 | INFO     | all data control threads have been joined
[2025-10-20 09:25:11] 2025-10-20 13:24:31,882 | INFO     | [payload] failed_post thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:31,913 | INFO     | all job control threads have been joined
[2025-10-20 09:25:11] 2025-10-20 13:24:31,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 09:25:11] 2025-10-20 13:24:32,004 | INFO     | [payload] control thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:32,055 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:32,056 | INFO     | [data] copytool_in thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:32,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:32,365 | INFO     | [payload] validate_post thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:32,847 | INFO     | [data] control thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:32,921 | INFO     | [job] control thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:33,076 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:33,179 | INFO     | [job] validate thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:33,248 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:33,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 09:25:11] 2025-10-20 13:24:33,947 | INFO     | [data] copytool_out thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:34,754 | INFO     | [job] queue monitor thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:24:34,827 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 09:25:11] 2025-10-20 13:25:01,236 | INFO     | PID=3898205 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 09:25:11] 2025-10-20 13:25:01,236 | INFO     | .. there are 6 such processes running
[2025-10-20 09:25:11] 2025-10-20 13:25:01,237 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 09:25:11] 2025-10-20 13:25:01,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 09:25:11] 2025-10-20 13:25:01,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 09:25:11] 2025-10-20 13:25:04,827 | INFO     | [monitor] cgroup control has ended
[2025-10-20 09:25:11] 2025-10-20 13:25:05,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874673149760)>', '<ExcThread(monitor, started 139874174748416)>']
[2025-10-20 09:25:11] 2025-10-20 13:25:06,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 09:25:11] 2025-10-20 13:25:06,271 | INFO     | [monitor] control thread has ended
[2025-10-20 09:25:11] 2025-10-20 13:25:10,844 | INFO     | all workflow threads have been joined
[2025-10-20 09:25:11] 2025-10-20 13:25:10,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 09:25:11] 2025-10-20 13:25:10,845 | INFO     | traces error code: 0
[2025-10-20 09:25:11] 2025-10-20 13:25:10,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 09:25:11] 2025-10-20 13:25:11,147 [wrapper] ==== pilot stdout END ====
[2025-10-20 09:25:11] 2025-10-20 13:25:11,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 09:25:11] 2025-10-20 13:25:11,151 [wrapper] pilotpid: 3898205
[2025-10-20 09:25:11] 2025-10-20 13:25:11,154 [wrapper] Pilot exit status: 0
[2025-10-20 09:25:11] 2025-10-20 13:25:11,177 [wrapper] pandaids: 6852454422
[2025-10-20 09:25:11] 2025-10-20 13:25:11,308 [wrapper] cleanup supervisor_pilot 4155801 3898206
[2025-10-20 09:25:11] 2025-10-20 13:25:11,340 [wrapper] Test setup, not cleaning
[2025-10-20 09:25:11] 2025-10-20 13:25:11,373 [wrapper] apfmon messages muted
[2025-10-20 09:25:11] 2025-10-20 13:25:11,388 [wrapper] ==== wrapper stdout END ====
[2025-10-20 09:25:11] 2025-10-20 13:25:11,391 [wrapper] ==== wrapper stderr END ====
[2025-10-20 09:25:11]  *** Error codes and diagnostics ***
[2025-10-20 09:25:11]     "exeErrorCode": 0,
[2025-10-20 09:25:11]     "exeErrorDiag": "",
[2025-10-20 09:25:11]     "pilotErrorCode": 0,
[2025-10-20 09:25:11]     "pilotErrorDiag": "",
[2025-10-20 09:25:11]  *** Listing of results directory ***
[2025-10-20 09:25:11] total 336224
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 06:17 queuedata.json
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 06:17 pilot3.tar.gz
[2025-10-20 09:25:11] -rwx------. 1 boincer umatlas     36292 Oct 20 06:17 runpilot2-wrapper.sh
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas       100 Oct 20 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 09:25:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 06:18 run_atlas
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas       105 Oct 20 06:18 job.xml
[2025-10-20 09:25:11] -rw-r--r--. 2 boincer umatlas 190283276 Oct 20 06:18 EVNT.46808900._000257.pool.root.1
[2025-10-20 09:25:11] -rw-r--r--. 2 boincer umatlas    569674 Oct 20 06:18 input.tar.gz
[2025-10-20 09:25:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 06:18 start_atlas.sh
[2025-10-20 09:25:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 06:18 shared
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas         0 Oct 20 06:18 boinc_lockfile
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas      2506 Oct 20 06:18 pandaJob.out
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas    976379 Oct 20 06:18 agis_schedconf.cvmfs.json
[2025-10-20 09:25:11] drwx------. 5 boincer umatlas      4096 Oct 20 06:18 pilot3
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas      6660 Oct 20 09:20 init_data.xml
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas 146236908 Oct 20 09:23 HITS.46808902._006517.pool.root.1
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas       531 Oct 20 09:23 boinc_task_state.xml
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas      1043 Oct 20 09:23 memory_monitor_summary.json
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas   1560740 Oct 20 09:24 agis_ddmendpoints.agis.ALL.json
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas    451783 Oct 20 09:24 log.46808902._006517.job.log.tgz.1
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas        95 Oct 20 09:24 pilot_heartbeat.json
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas      7827 Oct 20 09:24 heartbeat.json
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 09:24 boinc_mmap_file
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas        28 Oct 20 09:24 wrapper_checkpoint.txt
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas      4823 Oct 20 09:25 pilotlog.txt
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas   1479925 Oct 20 09:25 log.46808902._006517.job.log.1
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas       357 Oct 20 09:25 output.list
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas       620 Oct 20 09:25 runtime_log
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas   1955840 Oct 20 09:25 result.tar.gz
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas      8701 Oct 20 09:25 runtime_log.err
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas       654 Oct 20 09:25 ef8MDmX81U8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlJdMDmKYQ2Rm.diag
[2025-10-20 09:25:11] -rw-r--r--. 1 boincer umatlas     20971 Oct 20 09:25 stderr.txt
[2025-10-20 09:25:11] HITS file was successfully produced:
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas 146236908 Oct 20 09:23 shared/HITS.pool.root.1
[2025-10-20 09:25:11]  *** Contents of shared directory: ***
[2025-10-20 09:25:11] total 331128
[2025-10-20 09:25:11] -rw-r--r--. 2 boincer umatlas 190283276 Oct 20 06:18 ATLAS.root_0
[2025-10-20 09:25:11] -rw-r--r--. 2 boincer umatlas    569674 Oct 20 06:18 input.tar.gz
[2025-10-20 09:25:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 06:18 start_atlas.sh
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas 146236908 Oct 20 09:23 HITS.pool.root.1
[2025-10-20 09:25:11] -rw-------. 1 boincer umatlas   1955840 Oct 20 09:25 result.tar.gz
09:25:13 (3894139): run_atlas exited; CPU time 40055.013956
09:25:13 (3894139): called boinc_finish(0)

</stderr_txt>
]]>

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