Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:10:25 (3971709): wrapper (7.7.26015): starting
04:10:25 (3971709): wrapper: running run_atlas (--nthreads 10)
[2025-10-20 04:10:25] Arguments: --nthreads 10
[2025-10-20 04:10:25] Threads: 10
[2025-10-20 04:10:25] Checking for CVMFS
[2025-10-20 04:10:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 04:10:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 04:10:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 04:10:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 04:10:26] 2.13.2.0 681289 136288 169136 151915 2 65 38514203 40960001 18284 16776704 0 332128218 99.768 197787098 35273 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 04:10:26] CVMFS is ok
[2025-10-20 04:10:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 04:10:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 04:10:26] Further information can be found at the LHC@home message board.
[2025-10-20 04:10:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 04:10:26] Checking for apptainer binary...
[2025-10-20 04:10:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 04:10:26] Running /usr/bin/apptainer --version
[2025-10-20 04:10:26] apptainer version 1.4.3-1.el9
[2025-10-20 04:10:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 04:10:27] c-212-14.aglt2.org
[2025-10-20 04:10:27] apptainer works
[2025-10-20 04:10:27] Set ATHENA_PROC_NUMBER=10
[2025-10-20 04:10:27] Set ATHENA_CORE_NUMBER=10
[2025-10-20 04:10:27] Starting ATLAS job with PandaID=6848042455
[2025-10-20 04:10:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 05:19:16]  *** The last 200 lines of the pilot log: ***
[2025-10-20 05:19:16]  replicas=None
[2025-10-20 05:19:16]  scope=mc23_13p6TeV
[2025-10-20 05:19:16]  status=None
[2025-10-20 05:19:16]  status_code=0
[2025-10-20 05:19:16]  storage_token=
[2025-10-20 05:19:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6848042455/log.46771637._046666.job.log.tgz.1
[2025-10-20 05:19:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/17/log.46771637._046666.job.log.tgz.1
[2025-10-20 05:19:16]  workdir=None
[2025-10-20 05:19:16] ]
[2025-10-20 05:19:16] 2025-10-20 09:18:37,570 | INFO     | transferring file log.46771637._046666.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848042455/log.46771637._046666.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-20 05:19:16] 2025-10-20 09:18:37,570 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848042455/log.46771637._046666.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._046666.job
[2025-10-20 05:19:16] 2025-10-20 09:18:37,587 | INFO     | adding to output.list: log.46771637._046666.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/17/log.46771637._046666.job.log.tg
[2025-10-20 05:19:16] 2025-10-20 09:18:37,588 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-20 05:19:16] 2025-10-20 09:18:37,588 | INFO     | summary of transferred files:
[2025-10-20 05:19:16] 2025-10-20 09:18:37,588 | INFO     |  -- lfn=log.46771637._046666.job.log.tgz.1, status_code=0, status=transferred
[2025-10-20 05:19:16] 2025-10-20 09:18:37,588 | INFO     | stage-out finished correctly
[2025-10-20 05:19:16] 2025-10-20 09:18:38,583 | WARNING  | process 3983089 can no longer be monitored (due to stat problems) - aborting
[2025-10-20 05:19:16] 2025-10-20 09:18:38,583 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848042455/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 05:19:16] 2025-10-20 09:18:38,879 | INFO     | number of running child processes to parent process 3983089: 1
[2025-10-20 05:19:16] 2025-10-20 09:18:38,880 | INFO     | maximum number of monitored processes: 6
[2025-10-20 05:19:16] 2025-10-20 09:18:38,989 | INFO     | time since job start (4073s) is within the limit (172800.0s)
[2025-10-20 05:19:16] 2025-10-20 09:18:40,670 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-20 05:19:16] 2025-10-20 09:18:40,741 | INFO     | job 6848042455 has state=finished
[2025-10-20 05:19:16] 2025-10-20 09:18:40,741 | INFO     | preparing for final server update for job 6848042455 in state='finished'
[2025-10-20 05:19:16] 2025-10-20 09:18:40,742 | INFO     | this job has now completed (state=finished)
[2025-10-20 05:19:16] 2025-10-20 09:18:40,742 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-20 05:19:16] 2025-10-20 09:18:40,742 | INFO     | log transfer has been attempted: DONE
[2025-10-20 05:19:16] 2025-10-20 09:18:40,742 | INFO     | job 6848042455 has finished - writing final server update
[2025-10-20 05:19:16] 2025-10-20 09:18:40,742 | INFO     | total number of processed events: 400 (read)
[2025-10-20 05:19:16] 2025-10-20 09:18:40,743 | INFO     | executing command: lscpu
[2025-10-20 05:19:16] 2025-10-20 09:18:40,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-20 05:19:16] 2025-10-20 09:18:40,994 | INFO     | time since job start (4075s) is within the limit (172800.0s)
[2025-10-20 05:19:16] 2025-10-20 09:18:41,382 | INFO     | monitor loop #301: job 0:6848042455 is in state 'finished'
[2025-10-20 05:19:16] 2025-10-20 09:18:41,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,001 | INFO     | time since job start (4078s) is within the limit (172800.0s)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-20 05:19:16] 2025-10-20 09:18:43,379 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3000.2911354166667
[2025-10-20 05:19:16] 2025-10-20 09:18:43,392 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848042455/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,392 | INFO     | extracted standard info from prmon json
[2025-10-20 05:19:16] 2025-10-20 09:18:43,392 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 05:19:16] 2025-10-20 09:18:43,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 05:19:16] 2025-10-20 09:18:43,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 05:19:16] 2025-10-20 09:18:43,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 05:19:16] 2025-10-20 09:18:43,394 | INFO     | fitting pss+swap vs Time
[2025-10-20 05:19:16] 2025-10-20 09:18:43,394 | INFO     | sum of square deviations: 66959395.0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,394 | INFO     | sum of deviations: 2674367673.0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,394 | INFO     | mean x: 1760949984.5
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | mean y: 2737322.1333333333
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | -- intersect: -70329853232.43561
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | intersect: -70329853232.43561
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | chi2: 0.027305598483100157
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | -- intersect: -70329853232.43561
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | current memory leak: 39.94 B/s (using 60 data points, chi2=0.03)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | could have reported an average CPU frequency of 3011 MHz (6 samples)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | ..............................
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | . Timing measurements:
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | . get job = 0 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,395 | INFO     | . initial setup = 3 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,396 | INFO     | . payload setup = 9 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,396 | INFO     | . stage-in = 0 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,396 | INFO     | . payload execution = 4040 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,396 | INFO     | . stage-out = 0 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,396 | INFO     | . log creation = 0 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,396 | INFO     | ..............................
[2025-10-20 05:19:16] 2025-10-20 09:18:43,453 | INFO     | 
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | job summary report
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | --------------------------------------------------
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | PanDA job id: 6848042455
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | task id: 46771637
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | errors: (none)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | pilot state: finished 
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | transexitcode: 0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | exeerrorcode: 0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | exeerrordiag: 
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | exitcode: 0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | exitmsg: OK
[2025-10-20 05:19:16] 2025-10-20 09:18:43,455 | INFO     | cpuconsumptiontime: 34768 s
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | nevents: 400
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | neventsw: 0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | pid: 3983089
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | pgrp: 3983089
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | corecount: 10
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | event service: False
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | sizes: {0: 2348758, 1: 2348957, 7: 2349219, 12: 2349247, 4053: 2375013, 4054: 2384011, 4057: 2384195, 4059: 2384389}
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | --------------------------------------------------
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | 
[2025-10-20 05:19:16] 2025-10-20 09:18:43,456 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-20 05:19:16] 2025-10-20 09:18:43,470 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | job 6848042455 has completed (purged errors)
[2025-10-20 05:19:16] 2025-10-20 09:18:43,472 | INFO     | overall cleanup function is called
[2025-10-20 05:19:16] 2025-10-20 09:18:44,476 | INFO     | --- collectZombieJob: --- 10, [3983089]
[2025-10-20 05:19:16] 2025-10-20 09:18:44,476 | INFO     | zombie collector waiting for pid 3983089
[2025-10-20 05:19:16] 2025-10-20 09:18:44,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 05:19:16] 2025-10-20 09:18:44,477 | INFO     | collected zombie processes
[2025-10-20 05:19:16] 2025-10-20 09:18:44,477 | INFO     | will attempt to kill all subprocesses of pid=3983089
[2025-10-20 05:19:16] 2025-10-20 09:18:44,759 | INFO     | process IDs to be killed: [3983089] (in reverse order)
[2025-10-20 05:19:16] 2025-10-20 09:18:44,842 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 05:19:16] 2025-10-20 09:18:44,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 05:19:16] 2025-10-20 09:18:44,857 | INFO     | did not find any defunct processes belonging to 3983089
[2025-10-20 05:19:16] 2025-10-20 09:18:44,870 | INFO     | did not find any defunct processes belonging to 3983089
[2025-10-20 05:19:16] 2025-10-20 09:18:44,871 | INFO     | ready for new job
[2025-10-20 05:19:16] 2025-10-20 09:18:44,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 05:19:16] 2025-10-20 09:18:44,872 | INFO     | ***************************************
[2025-10-20 05:19:16] 2025-10-20 09:18:44,872 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 05:19:16] 2025-10-20 09:18:44,873 | INFO     | ***************************************
[2025-10-20 05:19:16] 2025-10-20 09:18:44,873 | INFO     | 
[2025-10-20 05:19:16] 2025-10-20 09:18:44,878 | INFO     | architecture information:
[2025-10-20 05:19:16] 2025-10-20 09:18:44,879 | INFO     | executing command: cat /etc/os-release
[2025-10-20 05:19:16] 2025-10-20 09:18:44,898 | INFO     | cat /etc/os-release:
[2025-10-20 05:19:16] NAME="CentOS Linux"
[2025-10-20 05:19:16] VERSION="7 (Core)"
[2025-10-20 05:19:16] ID="centos"
[2025-10-20 05:19:16] ID_LIKE="rhel fedora"
[2025-10-20 05:19:16] VERSION_ID="7"
[2025-10-20 05:19:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 05:19:16] ANSI_COLOR="0;31"
[2025-10-20 05:19:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 05:19:16] HOME_URL="https://www.centos.org/"
[2025-10-20 05:19:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 05:19:16] 
[2025-10-20 05:19:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 05:19:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 05:19:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 05:19:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 05:19:16] 
[2025-10-20 05:19:16] 2025-10-20 09:18:44,899 | INFO     | ***************************************
[2025-10-20 05:19:16] 2025-10-20 09:18:45,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-20 05:19:16] 2025-10-20 09:18:45,418 | INFO     | sufficient remaining disk space (129808465920 B)
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | INFO     | update_server=False
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 05:19:16] 2025-10-20 09:18:45,419 | INFO     | aborting loop
[2025-10-20 05:19:16] 2025-10-20 09:18:45,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 05:19:16] 2025-10-20 09:18:45,815 | INFO     | all payload control threads have been joined
[2025-10-20 05:19:16] 2025-10-20 09:18:45,838 | INFO     | all data control threads have been joined
[2025-10-20 05:19:16] 2025-10-20 09:18:46,420 | INFO     | [job] retrieve thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,424 | INFO     | [job] job monitor thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,424 | INFO     | [job] queue monitor thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,617 | INFO     | all job control threads have been joined
[2025-10-20 05:19:16] 2025-10-20 09:18:46,665 | INFO     | [payload] failed_post thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 05:19:16] 2025-10-20 09:18:46,755 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,818 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,818 | INFO     | [payload] control thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:46,844 | INFO     | [data] control thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:47,391 | INFO     | [data] copytool_in thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:47,502 | INFO     | [payload] validate_post thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:47,619 | INFO     | [job] control thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:47,620 | INFO     | [job] validate thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:47,668 | INFO     | [data] copytool_out thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:47,791 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:50,752 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:51,220 | INFO     | [monitor] cgroup control has ended
[2025-10-20 05:19:16] 2025-10-20 09:18:55,861 | INFO     | job.realtimelogging is not enabled
[2025-10-20 05:19:16] 2025-10-20 09:18:56,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 05:19:16] 2025-10-20 09:18:56,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280379643712)>', '<ExcThread(monitor, started 140280023979776)>']
[2025-10-20 05:19:16] 2025-10-20 09:19:01,911 | INFO     | all workflow threads have been joined
[2025-10-20 05:19:16] 2025-10-20 09:19:01,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 05:19:16] 2025-10-20 09:19:01,914 | INFO     | traces error code: 0
[2025-10-20 05:19:16] 2025-10-20 09:19:01,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 05:19:16] 2025-10-20 09:19:16,513 | INFO     | PID=3976254 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 05:19:16] 2025-10-20 09:19:16,513 | INFO     | .. there are 11 such processes running
[2025-10-20 05:19:16] 2025-10-20 09:19:16,514 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 05:19:16] 2025-10-20 09:19:16,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 05:19:16] 2025-10-20 09:19:16,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 05:19:16] 2025-10-20 09:19:16,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 05:19:16] 2025-10-20 09:19:16,514 | INFO     | [monitor] control thread has ended
[2025-10-20 05:19:16] 2025-10-20 09:19:16,612 [wrapper] ==== pilot stdout END ====
[2025-10-20 05:19:16] 2025-10-20 09:19:16,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 05:19:16] 2025-10-20 09:19:16,618 [wrapper] pilotpid: 3976254
[2025-10-20 05:19:16] 2025-10-20 09:19:16,621 [wrapper] Pilot exit status: 0
[2025-10-20 05:19:16] 2025-10-20 09:19:16,632 [wrapper] pandaids: 6848042455
[2025-10-20 05:19:16] 2025-10-20 09:19:16,710 [wrapper] cleanup supervisor_pilot 4081326 3976255
[2025-10-20 05:19:16] 2025-10-20 09:19:16,713 [wrapper] Test setup, not cleaning
[2025-10-20 05:19:16] 2025-10-20 09:19:16,715 [wrapper] apfmon messages muted
[2025-10-20 05:19:16] 2025-10-20 09:19:16,718 [wrapper] ==== wrapper stdout END ====
[2025-10-20 05:19:16] 2025-10-20 09:19:16,723 [wrapper] ==== wrapper stderr END ====
[2025-10-20 05:19:16]  *** Error codes and diagnostics ***
[2025-10-20 05:19:16]     "exeErrorCode": 0,
[2025-10-20 05:19:16]     "exeErrorDiag": "",
[2025-10-20 05:19:16]     "pilotErrorCode": 0,
[2025-10-20 05:19:16]     "pilotErrorDiag": "",
[2025-10-20 05:19:16]  *** Listing of results directory ***
[2025-10-20 05:19:16] total 430260
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 18 15:44 pilot3.tar.gz
[2025-10-20 05:19:16] -rwx------. 1 boincer umatlas     36292 Oct 18 16:08 runpilot2-wrapper.sh
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 18 16:08 queuedata.json
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas       100 Oct 20 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 05:19:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 04:10 run_atlas
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas       105 Oct 20 04:10 job.xml
[2025-10-20 05:19:16] -rw-r--r--. 2 boincer umatlas 228004362 Oct 20 04:10 EVNT.46771634._001966.pool.root.1
[2025-10-20 05:19:16] -rw-r--r--. 2 boincer umatlas    569671 Oct 20 04:10 input.tar.gz
[2025-10-20 05:19:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 04:10 start_atlas.sh
[2025-10-20 05:19:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 04:10 shared
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas         0 Oct 20 04:10 boinc_lockfile
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas      2558 Oct 20 04:10 pandaJob.out
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas    976430 Oct 20 04:10 agis_schedconf.cvmfs.json
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas   1560740 Oct 20 04:10 agis_ddmendpoints.agis.ALL.json
[2025-10-20 05:19:16] drwx------. 5 boincer umatlas      4096 Oct 20 04:10 pilot3
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas      6946 Oct 20 05:09 init_data.xml
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas 206735850 Oct 20 05:18 HITS.46771637._046666.pool.root.1
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas       529 Oct 20 05:18 boinc_task_state.xml
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas      1030 Oct 20 05:18 memory_monitor_summary.json
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas    363465 Oct 20 05:18 log.46771637._046666.job.log.tgz.1
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas      7774 Oct 20 05:18 heartbeat.json
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 05:19 boinc_mmap_file
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas        27 Oct 20 05:19 wrapper_checkpoint.txt
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas       823 Oct 20 05:19 pilotlog.txt
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas        95 Oct 20 05:19 pilot_heartbeat.json
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas    606638 Oct 20 05:19 log.46771637._046666.job.log.1
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas       357 Oct 20 05:19 output.list
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas       620 Oct 20 05:19 runtime_log
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas    993280 Oct 20 05:19 result.tar.gz
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas       653 Oct 20 05:19 z9aLDmoOSU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SyNDmUprcem.diag
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas      8705 Oct 20 05:19 runtime_log.err
[2025-10-20 05:19:16] -rw-r--r--. 1 boincer umatlas     21852 Oct 20 05:19 stderr.txt
[2025-10-20 05:19:16] HITS file was successfully produced:
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas 206735850 Oct 20 05:18 shared/HITS.pool.root.1
[2025-10-20 05:19:16]  *** Contents of shared directory: ***
[2025-10-20 05:19:16] total 426108
[2025-10-20 05:19:16] -rw-r--r--. 2 boincer umatlas 228004362 Oct 20 04:10 ATLAS.root_0
[2025-10-20 05:19:16] -rw-r--r--. 2 boincer umatlas    569671 Oct 20 04:10 input.tar.gz
[2025-10-20 05:19:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 04:10 start_atlas.sh
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas 206735850 Oct 20 05:18 HITS.pool.root.1
[2025-10-20 05:19:16] -rw-------. 1 boincer umatlas    993280 Oct 20 05:19 result.tar.gz
05:19:18 (3971709): run_atlas exited; CPU time 34838.601442
05:19:18 (3971709): called boinc_finish(0)

</stderr_txt>
]]>

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