Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:55:46 (12309): wrapper (7.7.26015): starting
02:55:46 (12309): wrapper: running run_atlas (--nthreads 8)
[2025-10-20 02:55:46] Arguments: --nthreads 8
[2025-10-20 02:55:46] Threads: 8
[2025-10-20 02:55:46] Checking for CVMFS
[2025-10-20 02:55:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 02:55:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 02:55:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 02:55:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 02:55:47] 2.11.2.0 2876 12105 84444 151914 1 10 11207756 20275200 2 130560 0 5935777 99.969 713334 39445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 02:55:47] CVMFS is ok
[2025-10-20 02:55:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 02:55:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 02:55:47] Further information can be found at the LHC@home message board.
[2025-10-20 02:55:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 02:55:47] Checking for apptainer binary...
[2025-10-20 02:55:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 02:55:47] Running /usr/bin/apptainer --version
[2025-10-20 02:55:47] apptainer version 1.3.2-1.el7
[2025-10-20 02:55:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 02:55:48] c-204-40.aglt2.org
[2025-10-20 02:55:48] apptainer works
[2025-10-20 02:55:49] Set ATHENA_PROC_NUMBER=8
[2025-10-20 02:55:49] Set ATHENA_CORE_NUMBER=8
[2025-10-20 02:55:49] Starting ATLAS job with PandaID=6852299197
[2025-10-20 02:55:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 04:36:36]  *** The last 200 lines of the pilot log: ***
[2025-10-20 04:36:36]  status_code=0
[2025-10-20 04:36:36]  storage_token=
[2025-10-20 04:36:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6852299197/log.46808902._006015.job.log.tgz.1
[2025-10-20 04:36:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/a0/log.46808902._006015.job.log.tgz.1
[2025-10-20 04:36:36]  workdir=None
[2025-10-20 04:36:36] ]
[2025-10-20 04:36:36] 2025-10-20 08:35:26,032 | INFO     | transferring file log.46808902._006015.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6852299197/log.46808902._006015.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-20 04:36:36] 2025-10-20 08:35:26,032 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6852299197/log.46808902._006015.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._006015.job
[2025-10-20 04:36:36] 2025-10-20 08:35:26,057 | INFO     | adding to output.list: log.46808902._006015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/a0/log.46808902._006015.job.log.tg
[2025-10-20 04:36:36] 2025-10-20 08:35:26,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-20 04:36:36] 2025-10-20 08:35:26,058 | INFO     | summary of transferred files:
[2025-10-20 04:36:36] 2025-10-20 08:35:26,059 | INFO     |  -- lfn=log.46808902._006015.job.log.tgz.1, status_code=0, status=transferred
[2025-10-20 04:36:36] 2025-10-20 08:35:26,059 | INFO     | stage-out finished correctly
[2025-10-20 04:36:36] 2025-10-20 08:35:26,778 | INFO     | monitor loop #436: job 0:6852299197 is in state 'finished'
[2025-10-20 04:36:36] 2025-10-20 08:35:26,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 04:36:36] 2025-10-20 08:35:27,258 | INFO     | time since job start (5943s) is within the limit (172800.0s)
[2025-10-20 04:36:36] 2025-10-20 08:35:29,262 | INFO     | time since job start (5945s) is within the limit (172800.0s)
[2025-10-20 04:36:36] 2025-10-20 08:35:29,282 | INFO     | monitor loop #437: job 0:6852299197 is in state 'finished'
[2025-10-20 04:36:36] 2025-10-20 08:35:29,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 04:36:36] 2025-10-20 08:35:29,619 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-20 04:36:36] 2025-10-20 08:35:29,707 | INFO     | job 6852299197 has state=finished
[2025-10-20 04:36:36] 2025-10-20 08:35:29,707 | INFO     | preparing for final server update for job 6852299197 in state='finished'
[2025-10-20 04:36:36] 2025-10-20 08:35:29,708 | INFO     | this job has now completed (state=finished)
[2025-10-20 04:36:36] 2025-10-20 08:35:29,708 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-20 04:36:36] 2025-10-20 08:35:29,708 | INFO     | log transfer has been attempted: DONE
[2025-10-20 04:36:36] 2025-10-20 08:35:29,709 | INFO     | job 6852299197 has finished - writing final server update
[2025-10-20 04:36:36] 2025-10-20 08:35:29,709 | INFO     | total number of processed events: 400 (read)
[2025-10-20 04:36:36] 2025-10-20 08:35:29,710 | INFO     | executing command: lscpu
[2025-10-20 04:36:36] 2025-10-20 08:35:29,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-20 04:36:36] 2025-10-20 08:35:31,267 | INFO     | time since job start (5947s) is within the limit (172800.0s)
[2025-10-20 04:36:36] 2025-10-20 08:35:31,786 | INFO     | monitor loop #438: job 0:6852299197 is in state 'finished'
[2025-10-20 04:36:36] 2025-10-20 08:35:31,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 04:36:36] 2025-10-20 08:35:33,273 | INFO     | time since job start (5949s) is within the limit (172800.0s)
[2025-10-20 04:36:36] 2025-10-20 08:35:34,289 | INFO     | monitor loop #439: job 0:6852299197 is in state 'finished'
[2025-10-20 04:36:36] 2025-10-20 08:35:34,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,277 | INFO     | time since job start (5951s) is within the limit (172800.0s)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,355 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-20 04:36:36] 2025-10-20 08:35:35,358 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-10-20 04:36:36] 2025-10-20 08:35:35,361 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852299197/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,362 | INFO     | extracted standard info from prmon json
[2025-10-20 04:36:36] 2025-10-20 08:35:35,362 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 04:36:36] 2025-10-20 08:35:35,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 04:36:36] 2025-10-20 08:35:35,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 04:36:36] 2025-10-20 08:35:35,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 04:36:36] 2025-10-20 08:35:35,365 | INFO     | fitting pss+swap vs Time
[2025-10-20 04:36:36] 2025-10-20 08:35:35,366 | INFO     | sum of square deviations: 226022842.5
[2025-10-20 04:36:36] 2025-10-20 08:35:35,366 | INFO     | sum of deviations: -4595544434.0
[2025-10-20 04:36:36] 2025-10-20 08:35:35,366 | INFO     | mean x: 1760946444.5
[2025-10-20 04:36:36] 2025-10-20 08:35:35,366 | INFO     | mean y: 2499925.3333333335
[2025-10-20 04:36:36] 2025-10-20 08:35:35,367 | INFO     | -- intersect: 35806437005.6931
[2025-10-20 04:36:36] 2025-10-20 08:35:35,367 | INFO     | intersect: 35806437005.6931
[2025-10-20 04:36:36] 2025-10-20 08:35:35,367 | INFO     | chi2: 0.07196692412135605
[2025-10-20 04:36:36] 2025-10-20 08:35:35,367 | INFO     | -- intersect: 35806437005.6931
[2025-10-20 04:36:36] 2025-10-20 08:35:35,367 | INFO     | current memory leak: -20.33 B/s (using 90 data points, chi2=0.07)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | could have reported an average CPU frequency of 2154 MHz (7 samples)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | ..............................
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | . Timing measurements:
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | . get job = 2 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | . initial setup = 7 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | . payload setup = 5 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,368 | INFO     | . stage-in = 0 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,369 | INFO     | . payload execution = 5902 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,369 | INFO     | . stage-out = 0 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,369 | INFO     | . log creation = 0 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,369 | INFO     | ..............................
[2025-10-20 04:36:36] 2025-10-20 08:35:35,465 | INFO     | 
[2025-10-20 04:36:36] 2025-10-20 08:35:35,465 | INFO     | job summary report
[2025-10-20 04:36:36] 2025-10-20 08:35:35,466 | INFO     | --------------------------------------------------
[2025-10-20 04:36:36] 2025-10-20 08:35:35,466 | INFO     | PanDA job id: 6852299197
[2025-10-20 04:36:36] 2025-10-20 08:35:35,466 | INFO     | task id: 46808902
[2025-10-20 04:36:36] 2025-10-20 08:35:35,466 | INFO     | errors: (none)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 04:36:36] 2025-10-20 08:35:35,467 | INFO     | pilot state: finished 
[2025-10-20 04:36:36] 2025-10-20 08:35:35,467 | INFO     | transexitcode: 0
[2025-10-20 04:36:36] 2025-10-20 08:35:35,467 | INFO     | exeerrorcode: 0
[2025-10-20 04:36:36] 2025-10-20 08:35:35,467 | INFO     | exeerrordiag: 
[2025-10-20 04:36:36] 2025-10-20 08:35:35,467 | INFO     | exitcode: 0
[2025-10-20 04:36:36] 2025-10-20 08:35:35,467 | INFO     | exitmsg: OK
[2025-10-20 04:36:36] 2025-10-20 08:35:35,468 | INFO     | cpuconsumptiontime: 42126 s
[2025-10-20 04:36:36] 2025-10-20 08:35:35,468 | INFO     | nevents: 400
[2025-10-20 04:36:36] 2025-10-20 08:35:35,468 | INFO     | neventsw: 0
[2025-10-20 04:36:36] 2025-10-20 08:35:35,468 | INFO     | pid: 27172
[2025-10-20 04:36:36] 2025-10-20 08:35:35,468 | INFO     | pgrp: 27172
[2025-10-20 04:36:36] 2025-10-20 08:35:35,468 | INFO     | corecount: 8
[2025-10-20 04:36:36] 2025-10-20 08:35:35,469 | INFO     | event service: False
[2025-10-20 04:36:36] 2025-10-20 08:35:35,469 | INFO     | sizes: {0: 2348024, 1: 2348709, 3: 2348908, 14: 2348908, 17: 2349198, 25: 2349226, 5911: 2376046, 5912: 2385044, 5916: 2385100, 5922: 2385294}
[2025-10-20 04:36:36] 2025-10-20 08:35:35,469 | INFO     | --------------------------------------------------
[2025-10-20 04:36:36] 2025-10-20 08:35:35,469 | INFO     | 
[2025-10-20 04:36:36] 2025-10-20 08:35:35,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-20 04:36:36] 2025-10-20 08:35:35,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 04:36:36] 2025-10-20 08:35:35,501 | INFO     | job 6852299197 has completed (purged errors)
[2025-10-20 04:36:36] 2025-10-20 08:35:35,502 | INFO     | overall cleanup function is called
[2025-10-20 04:36:36] 2025-10-20 08:35:36,506 | INFO     | --- collectZombieJob: --- 10, [27172]
[2025-10-20 04:36:36] 2025-10-20 08:35:36,506 | INFO     | zombie collector waiting for pid 27172
[2025-10-20 04:36:36] 2025-10-20 08:35:36,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 04:36:36] 2025-10-20 08:35:36,507 | INFO     | collected zombie processes
[2025-10-20 04:36:36] 2025-10-20 08:35:36,507 | INFO     | will attempt to kill all subprocesses of pid=27172
[2025-10-20 04:36:36] 2025-10-20 08:35:36,596 | INFO     | process IDs to be killed: [27172] (in reverse order)
[2025-10-20 04:36:36] 2025-10-20 08:35:36,653 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 04:36:36] 2025-10-20 08:35:36,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 04:36:36] 2025-10-20 08:35:36,658 | INFO     | did not find any defunct processes belonging to 27172
[2025-10-20 04:36:36] 2025-10-20 08:35:36,662 | INFO     | did not find any defunct processes belonging to 27172
[2025-10-20 04:36:36] 2025-10-20 08:35:36,662 | INFO     | ready for new job
[2025-10-20 04:36:36] 2025-10-20 08:35:36,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 04:36:36] 2025-10-20 08:35:36,664 | INFO     | ***************************************
[2025-10-20 04:36:36] 2025-10-20 08:35:36,664 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 04:36:36] 2025-10-20 08:35:36,664 | INFO     | ***************************************
[2025-10-20 04:36:36] 2025-10-20 08:35:36,664 | INFO     | 
[2025-10-20 04:36:36] 2025-10-20 08:35:36,665 | INFO     | architecture information:
[2025-10-20 04:36:36] 2025-10-20 08:35:36,666 | INFO     | executing command: cat /etc/os-release
[2025-10-20 04:36:36] 2025-10-20 08:35:36,682 | INFO     | cat /etc/os-release:
[2025-10-20 04:36:36] NAME="CentOS Linux"
[2025-10-20 04:36:36] VERSION="7 (Core)"
[2025-10-20 04:36:36] ID="centos"
[2025-10-20 04:36:36] ID_LIKE="rhel fedora"
[2025-10-20 04:36:36] VERSION_ID="7"
[2025-10-20 04:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 04:36:36] ANSI_COLOR="0;31"
[2025-10-20 04:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 04:36:36] HOME_URL="https://www.centos.org/"
[2025-10-20 04:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 04:36:36] 
[2025-10-20 04:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 04:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 04:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 04:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 04:36:36] 
[2025-10-20 04:36:36] 2025-10-20 08:35:36,683 | INFO     | ***************************************
[2025-10-20 04:36:36] 2025-10-20 08:35:37,186 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-20 04:36:36] 2025-10-20 08:35:37,205 | INFO     | sufficient remaining disk space (18671992832 B)
[2025-10-20 04:36:36] 2025-10-20 08:35:37,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 04:36:36] 2025-10-20 08:35:37,206 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 04:36:36] 2025-10-20 08:35:37,206 | INFO     | update_server=False
[2025-10-20 04:36:36] 2025-10-20 08:35:37,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 04:36:36] 2025-10-20 08:35:37,207 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-20 04:36:36] 2025-10-20 08:35:37,208 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 04:36:36] 2025-10-20 08:35:37,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 04:36:36] 2025-10-20 08:35:37,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 04:36:36] 2025-10-20 08:35:37,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 04:36:36] 2025-10-20 08:35:37,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 04:36:36] 2025-10-20 08:35:37,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 04:36:36] 2025-10-20 08:35:37,794 | INFO     | aborting loop
[2025-10-20 04:36:36] 2025-10-20 08:35:38,010 | INFO     | all data control threads have been joined
[2025-10-20 04:36:36] 2025-10-20 08:35:38,027 | INFO     | all job control threads have been joined
[2025-10-20 04:36:36] 2025-10-20 08:35:38,209 | INFO     | [job] queue monitor thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:38,212 | INFO     | [job] retrieve thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:38,215 | INFO     | all payload control threads have been joined
[2025-10-20 04:36:36] 2025-10-20 08:35:38,422 | INFO     | [data] copytool_in thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:38,423 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:38,800 | INFO     | [job] job monitor thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:38,979 | INFO     | [payload] validate_post thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,016 | INFO     | [data] control thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,033 | INFO     | [job] control thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,193 | INFO     | [job] validate thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,214 | INFO     | [data] copytool_out thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,218 | INFO     | [payload] control thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,592 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,676 | INFO     | [payload] failed_post thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:39,697 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:40,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 04:36:36] 2025-10-20 08:35:44,222 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:35:47,492 | INFO     | job.realtimelogging is not enabled
[2025-10-20 04:36:36] 2025-10-20 08:35:48,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 04:36:36] 2025-10-20 08:36:30,991 | INFO     | [monitor] cgroup control has ended
[2025-10-20 04:36:36] 2025-10-20 08:36:31,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475861587776)>', '<ExcThread(monitor, started 140475277235968)>']
[2025-10-20 04:36:36] 2025-10-20 08:36:32,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 04:36:36] 2025-10-20 08:36:32,458 | INFO     | [monitor] control thread has ended
[2025-10-20 04:36:36] 2025-10-20 08:36:36,514 | INFO     | all workflow threads have been joined
[2025-10-20 04:36:36] 2025-10-20 08:36:36,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 04:36:36] 2025-10-20 08:36:36,514 | INFO     | traces error code: 0
[2025-10-20 04:36:36] 2025-10-20 08:36:36,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 04:36:36] 2025-10-20 08:36:36,625 [wrapper] ==== pilot stdout END ====
[2025-10-20 04:36:36] 2025-10-20 08:36:36,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 04:36:36] 2025-10-20 08:36:36,635 [wrapper] pilotpid: 17845
[2025-10-20 04:36:36] 2025-10-20 08:36:36,639 [wrapper] Pilot exit status: 0
[2025-10-20 04:36:36] 2025-10-20 08:36:36,659 [wrapper] pandaids: 6852299197
[2025-10-20 04:36:36] 2025-10-20 08:36:36,713 [wrapper] cleanup supervisor_pilot 30321 17846
[2025-10-20 04:36:36] 2025-10-20 08:36:36,719 [wrapper] Test setup, not cleaning
[2025-10-20 04:36:36] 2025-10-20 08:36:36,724 [wrapper] apfmon messages muted
[2025-10-20 04:36:36] 2025-10-20 08:36:36,729 [wrapper] ==== wrapper stdout END ====
[2025-10-20 04:36:36] 2025-10-20 08:36:36,734 [wrapper] ==== wrapper stderr END ====
[2025-10-20 04:36:36]  *** Error codes and diagnostics ***
[2025-10-20 04:36:36]     "exeErrorCode": 0,
[2025-10-20 04:36:36]     "exeErrorDiag": "",
[2025-10-20 04:36:36]     "pilotErrorCode": 0,
[2025-10-20 04:36:36]     "pilotErrorDiag": "",
[2025-10-20 04:36:36]  *** Listing of results directory ***
[2025-10-20 04:36:36] total 325196
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 02:47 pilot3.tar.gz
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas      5112 Oct 20 02:51 queuedata.json
[2025-10-20 04:36:36] -rwx------ 1 boincer umatlas     36292 Oct 20 02:52 runpilot2-wrapper.sh
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas       100 Oct 20 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 04:36:36] -rwxr-xr-x 1 boincer umatlas      7986 Oct 20 02:55 run_atlas
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas       105 Oct 20 02:55 job.xml
[2025-10-20 04:36:36] -rw-r--r-- 2 boincer umatlas 189542180 Oct 20 02:55 EVNT.46808900._000237.pool.root.1
[2025-10-20 04:36:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 02:55 start_atlas.sh
[2025-10-20 04:36:36] drwxrwx--x 2 boincer umatlas      4096 Oct 20 02:55 shared
[2025-10-20 04:36:36] -rw-r--r-- 2 boincer umatlas    569673 Oct 20 02:55 input.tar.gz
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas         0 Oct 20 02:55 boinc_lockfile
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas      2506 Oct 20 02:55 pandaJob.out
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas    976369 Oct 20 02:56 agis_schedconf.cvmfs.json
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas   1560740 Oct 20 02:56 agis_ddmendpoints.agis.ALL.json
[2025-10-20 04:36:36] drwx------ 5 boincer umatlas      4096 Oct 20 02:56 pilot3
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas      5909 Oct 20 04:29 init_data.xml
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas        95 Oct 20 04:34 pilot_heartbeat.json
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas       529 Oct 20 04:34 boinc_task_state.xml
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas 137202774 Oct 20 04:34 HITS.46808902._006015.pool.root.1
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas      1049 Oct 20 04:35 memory_monitor_summary.json
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas    337280 Oct 20 04:35 log.46808902._006015.job.log.tgz.1
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas      7838 Oct 20 04:35 heartbeat.json
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas        27 Oct 20 04:36 wrapper_checkpoint.txt
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas      8192 Oct 20 04:36 boinc_mmap_file
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas      4624 Oct 20 04:36 pilotlog.txt
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas    843169 Oct 20 04:36 log.46808902._006015.job.log.1
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas       357 Oct 20 04:36 output.list
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas       620 Oct 20 04:36 runtime_log
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas   1198080 Oct 20 04:36 result.tar.gz
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas      8703 Oct 20 04:36 runtime_log.err
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas       658 Oct 20 04:36 AqgLDmavyU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzFdMDm0Ckhun.diag
[2025-10-20 04:36:36] -rw-r--r-- 1 boincer umatlas     22013 Oct 20 04:36 stderr.txt
[2025-10-20 04:36:36] HITS file was successfully produced:
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas 137202774 Oct 20 04:34 shared/HITS.pool.root.1
[2025-10-20 04:36:36]  *** Contents of shared directory: ***
[2025-10-20 04:36:36] total 320836
[2025-10-20 04:36:36] -rw-r--r-- 2 boincer umatlas 189542180 Oct 20 02:55 ATLAS.root_0
[2025-10-20 04:36:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 02:55 start_atlas.sh
[2025-10-20 04:36:36] -rw-r--r-- 2 boincer umatlas    569673 Oct 20 02:55 input.tar.gz
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas 137202774 Oct 20 04:34 HITS.pool.root.1
[2025-10-20 04:36:36] -rw------- 1 boincer umatlas   1198080 Oct 20 04:36 result.tar.gz
04:36:38 (12309): run_atlas exited; CPU time 42085.141297
04:36:38 (12309): called boinc_finish(0)

</stderr_txt>
]]>

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