Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:55:37 (2642519): wrapper (7.7.26015): starting
02:55:37 (2642519): wrapper: running run_atlas (--nthreads 8)
[2025-10-20 02:55:37] Arguments: --nthreads 8
[2025-10-20 02:55:37] Threads: 8
[2025-10-20 02:55:37] Checking for CVMFS
[2025-10-20 02:55:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 02:55:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 02:55:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 02:55:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 02:55:37] 2.13.2.0 738863 140450 338760 151914 0 27 31519860 32935936 17342 16776704 0 152848573 99.736 105448694 30596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-20 02:55:37] CVMFS is ok
[2025-10-20 02:55:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 02:55:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 02:55:37] Further information can be found at the LHC@home message board.
[2025-10-20 02:55:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 02:55:37] Checking for apptainer binary...
[2025-10-20 02:55:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 02:55:37] Running /usr/bin/apptainer --version
[2025-10-20 02:55:37] apptainer version 1.4.3-1.el9
[2025-10-20 02:55:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 02:55:37] c-4-38.aglt2.org
[2025-10-20 02:55:37] apptainer works
[2025-10-20 02:55:37] Set ATHENA_PROC_NUMBER=8
[2025-10-20 02:55:37] Set ATHENA_CORE_NUMBER=8
[2025-10-20 02:55:37] Starting ATLAS job with PandaID=6852299209
[2025-10-20 02:55:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 07:54:26]  *** The last 200 lines of the pilot log: ***
[2025-10-20 07:54:26] 2025-10-20 11:53:32,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 07:54:26] 2025-10-20 11:53:32,455 | INFO     | fitting pss+swap vs Time
[2025-10-20 07:54:26] 2025-10-20 11:53:32,456 | INFO     | sum of square deviations: 7800271854.914689
[2025-10-20 07:54:26] 2025-10-20 11:53:32,459 | INFO     | sum of deviations: 33661845714.402725
[2025-10-20 07:54:26] 2025-10-20 11:53:32,459 | INFO     | mean x: 1760952281.9829352
[2025-10-20 07:54:26] 2025-10-20 11:53:32,459 | INFO     | mean y: 2113632.8805460753
[2025-10-20 07:54:26] 2025-10-20 11:53:32,459 | INFO     | -- intersect: -7597224586.233777
[2025-10-20 07:54:26] 2025-10-20 11:53:32,460 | INFO     | intersect: -7597224586.233777
[2025-10-20 07:54:26] 2025-10-20 11:53:32,460 | INFO     | chi2: 2.293529960660609
[2025-10-20 07:54:26] 2025-10-20 11:53:32,461 | INFO     | sum of square deviations: 7407831400.0
[2025-10-20 07:54:26] 2025-10-20 11:53:32,463 | INFO     | sum of deviations: 49334653037.99996
[2025-10-20 07:54:26] 2025-10-20 11:53:32,464 | INFO     | mean x: 1760952129.5
[2025-10-20 07:54:26] 2025-10-20 11:53:32,464 | INFO     | mean y: 2119634.263888889
[2025-10-20 07:54:26] 2025-10-20 11:53:32,464 | INFO     | -- intersect: -11725464004.506517
[2025-10-20 07:54:26] 2025-10-20 11:53:32,464 | INFO     | intersect: -11725464004.506517
[2025-10-20 07:54:26] 2025-10-20 11:53:32,465 | INFO     | chi2: 1.6246703174750696
[2025-10-20 07:54:26] 2025-10-20 11:53:32,465 | INFO     | current chi2=1.6246703174750696 (change=29.16289103077105 %)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,466 | INFO     | sum of square deviations: 7028769099.943456
[2025-10-20 07:54:26] 2025-10-20 11:53:32,469 | INFO     | sum of deviations: 48900801443.533554
[2025-10-20 07:54:26] 2025-10-20 11:53:32,469 | INFO     | mean x: 1760951977.0141342
[2025-10-20 07:54:26] 2025-10-20 11:53:32,469 | INFO     | mean y: 2119460.116607774
[2025-10-20 07:54:26] 2025-10-20 11:53:32,469 | INFO     | -- intersect: -12249238032.941284
[2025-10-20 07:54:26] 2025-10-20 11:53:32,470 | INFO     | intersect: -12249238032.941284
[2025-10-20 07:54:26] 2025-10-20 11:53:32,470 | INFO     | chi2: 1.6243241190669744
[2025-10-20 07:54:26] 2025-10-20 11:53:32,470 | INFO     | current chi2=1.6243241190669744 (change=0.021308840591934827 %)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,470 | INFO     | right removable region: 282
[2025-10-20 07:54:26] 2025-10-20 11:53:32,471 | INFO     | sum of square deviations: 7407655720.0
[2025-10-20 07:54:26] 2025-10-20 11:53:32,474 | INFO     | sum of deviations: -7652561229.000006
[2025-10-20 07:54:26] 2025-10-20 11:53:32,474 | INFO     | mean x: 1760952434.5
[2025-10-20 07:54:26] 2025-10-20 11:53:32,475 | INFO     | mean y: 2129585.3819444445
[2025-10-20 07:54:26] 2025-10-20 11:53:32,475 | INFO     | -- intersect: 1821301106.8100317
[2025-10-20 07:54:26] 2025-10-20 11:53:32,475 | INFO     | intersect: 1821301106.8100317
[2025-10-20 07:54:26] 2025-10-20 11:53:32,475 | INFO     | chi2: 0.8709104594269461
[2025-10-20 07:54:26] 2025-10-20 11:53:32,476 | INFO     | current chi2=0.8709104594269461 (change=62.02750893316884 %)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,476 | INFO     | sum of square deviations: 7028452875.943456
[2025-10-20 07:54:26] 2025-10-20 11:53:32,479 | INFO     | sum of deviations: -3327525117.9364014
[2025-10-20 07:54:26] 2025-10-20 11:53:32,480 | INFO     | mean x: 1760952587.0141342
[2025-10-20 07:54:26] 2025-10-20 11:53:32,480 | INFO     | mean y: 2127837.48409894
[2025-10-20 07:54:26] 2025-10-20 11:53:32,480 | INFO     | -- intersect: 835826813.376864
[2025-10-20 07:54:26] 2025-10-20 11:53:32,480 | INFO     | intersect: 835826813.376864
[2025-10-20 07:54:26] 2025-10-20 11:53:32,480 | INFO     | chi2: 0.8573216454520376
[2025-10-20 07:54:26] 2025-10-20 11:53:32,481 | INFO     | current chi2=0.8573216454520376 (change=1.5602997791357196 %)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,481 | INFO     | left removable region: 20
[2025-10-20 07:54:26] 2025-10-20 11:53:32,481 | INFO     | sum of square deviations: 5577144911.480951
[2025-10-20 07:54:26] 2025-10-20 11:53:32,483 | INFO     | sum of deviations: 25414621271.465637
[2025-10-20 07:54:26] 2025-10-20 11:53:32,484 | INFO     | mean x: 1760952556.5877862
[2025-10-20 07:54:26] 2025-10-20 11:53:32,484 | INFO     | mean y: 2128246.4580152673
[2025-10-20 07:54:26] 2025-10-20 11:53:32,484 | INFO     | -- intersect: -8022397386.822297
[2025-10-20 07:54:26] 2025-10-20 11:53:32,484 | INFO     | intersect: -8022397386.822297
[2025-10-20 07:54:26] 2025-10-20 11:53:32,485 | INFO     | chi2: 0.09496125728282498
[2025-10-20 07:54:26] 2025-10-20 11:53:32,485 | INFO     | -- intersect: -8022397386.822297
[2025-10-20 07:54:26] 2025-10-20 11:53:32,485 | INFO     | current memory leak: 4.56 B/s (using 262 data points, chi2=0.09)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,486 | INFO     | could have reported an average CPU frequency of 2627 MHz (13 samples)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,486 | INFO     | ..............................
[2025-10-20 07:54:26] 2025-10-20 11:53:32,486 | INFO     | . Timing measurements:
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . get job = 0 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . initial setup = 2 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . payload setup = 5 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . stage-in = 0 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . payload execution = 17823 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . stage-out = 5 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | . log creation = 0 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,487 | INFO     | ..............................
[2025-10-20 07:54:26] 2025-10-20 11:53:32,602 | INFO     | 
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | job summary report
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | --------------------------------------------------
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | PanDA job id: 6852299209
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | task id: 46808902
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | errors: (none)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 07:54:26] 2025-10-20 11:53:32,603 | INFO     | pilot state: finished 
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | transexitcode: 0
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | exeerrorcode: 0
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | exeerrordiag: 
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | exitcode: 0
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | exitmsg: OK
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | cpuconsumptiontime: 38611 s
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | nevents: 400
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | neventsw: 0
[2025-10-20 07:54:26] 2025-10-20 11:53:32,604 | INFO     | pid: 2663897
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | pgrp: 2663897
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | corecount: 8
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | event service: False
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | sizes: {0: 2348625, 1: 2348880, 5: 2349142, 12: 2349198, 17832: 2381710, 17838: 2390708, 17840: 2390892, 17847: 2391086}
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | --------------------------------------------------
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | 
[2025-10-20 07:54:26] 2025-10-20 11:53:32,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-20 07:54:26] 2025-10-20 11:53:32,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 07:54:26] 2025-10-20 11:53:32,632 | INFO     | job 6852299209 has completed (purged errors)
[2025-10-20 07:54:26] 2025-10-20 11:53:32,632 | INFO     | overall cleanup function is called
[2025-10-20 07:54:26] 2025-10-20 11:53:33,640 | INFO     | --- collectZombieJob: --- 10, [2663897]
[2025-10-20 07:54:26] 2025-10-20 11:53:33,640 | INFO     | zombie collector waiting for pid 2663897
[2025-10-20 07:54:26] 2025-10-20 11:53:33,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 07:54:26] 2025-10-20 11:53:33,640 | INFO     | collected zombie processes
[2025-10-20 07:54:26] 2025-10-20 11:53:33,640 | INFO     | will attempt to kill all subprocesses of pid=2663897
[2025-10-20 07:54:26] 2025-10-20 11:53:33,998 | INFO     | process IDs to be killed: [2663897] (in reverse order)
[2025-10-20 07:54:26] 2025-10-20 11:53:34,104 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 07:54:26] 2025-10-20 11:53:34,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 07:54:26] 2025-10-20 11:53:34,119 | INFO     | did not find any defunct processes belonging to 2663897
[2025-10-20 07:54:26] 2025-10-20 11:53:34,131 | INFO     | did not find any defunct processes belonging to 2663897
[2025-10-20 07:54:26] 2025-10-20 11:53:34,131 | INFO     | ready for new job
[2025-10-20 07:54:26] 2025-10-20 11:53:34,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 07:54:26] 2025-10-20 11:53:34,134 | INFO     | ***************************************
[2025-10-20 07:54:26] 2025-10-20 11:53:34,135 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 07:54:26] 2025-10-20 11:53:34,135 | INFO     | ***************************************
[2025-10-20 07:54:26] 2025-10-20 11:53:34,135 | INFO     | 
[2025-10-20 07:54:26] 2025-10-20 11:53:34,149 | INFO     | architecture information:
[2025-10-20 07:54:26] 2025-10-20 11:53:34,150 | INFO     | executing command: cat /etc/os-release
[2025-10-20 07:54:26] 2025-10-20 11:53:34,168 | INFO     | cat /etc/os-release:
[2025-10-20 07:54:26] NAME="CentOS Linux"
[2025-10-20 07:54:26] VERSION="7 (Core)"
[2025-10-20 07:54:26] ID="centos"
[2025-10-20 07:54:26] ID_LIKE="rhel fedora"
[2025-10-20 07:54:26] VERSION_ID="7"
[2025-10-20 07:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 07:54:26] ANSI_COLOR="0;31"
[2025-10-20 07:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 07:54:26] HOME_URL="https://www.centos.org/"
[2025-10-20 07:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 07:54:26] 
[2025-10-20 07:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 07:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 07:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 07:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 07:54:26] 
[2025-10-20 07:54:26] 2025-10-20 11:53:34,168 | INFO     | ***************************************
[2025-10-20 07:54:26] 2025-10-20 11:53:34,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-20 07:54:26] 2025-10-20 11:53:34,693 | INFO     | sufficient remaining disk space (76638322688 B)
[2025-10-20 07:54:26] 2025-10-20 11:53:34,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 07:54:26] 2025-10-20 11:53:34,694 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 07:54:26] 2025-10-20 11:53:34,694 | INFO     | update_server=False
[2025-10-20 07:54:26] 2025-10-20 11:53:34,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 07:54:26] 2025-10-20 11:53:34,750 | INFO     | all data control threads have been joined
[2025-10-20 07:54:26] 2025-10-20 11:53:34,783 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-20 07:54:26] 2025-10-20 11:53:34,783 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-20 07:54:26] 2025-10-20 11:53:34,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 07:54:26] 2025-10-20 11:53:34,783 | INFO     | will abort loop
[2025-10-20 07:54:26] 2025-10-20 11:53:35,456 | INFO     | all job control threads have been joined
[2025-10-20 07:54:26] 2025-10-20 11:53:35,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 07:54:26] 2025-10-20 11:53:35,699 | INFO     | [job] retrieve thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:35,718 | INFO     | [payload] failed_post thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:35,756 | INFO     | [data] control thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:35,788 | INFO     | [job] job monitor thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:35,916 | INFO     | [payload] validate_post thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:35,956 | INFO     | all payload control threads have been joined
[2025-10-20 07:54:26] 2025-10-20 11:53:36,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 07:54:26] 2025-10-20 11:53:36,200 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,461 | INFO     | [job] control thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,513 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,624 | INFO     | [job] validate thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,783 | INFO     | [data] copytool_in thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,845 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:36,962 | INFO     | [payload] control thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:37,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 07:54:26] 2025-10-20 11:53:38,095 | INFO     | [data] copytool_out thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:38,621 | INFO     | [job] queue monitor thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:53:39,673 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 07:54:26] 2025-10-20 11:54:04,867 | INFO     | PID=2647308 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 07:54:26] 2025-10-20 11:54:04,868 | INFO     | .. there are 23 such processes running
[2025-10-20 07:54:26] 2025-10-20 11:54:04,868 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 07:54:26] 2025-10-20 11:54:04,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 07:54:26] 2025-10-20 11:54:04,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 07:54:26] 2025-10-20 11:54:20,776 | INFO     | [monitor] cgroup control has ended
[2025-10-20 07:54:26] 2025-10-20 11:54:21,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139846421632832)>', '<ExcThread(monitor, started 139845913523968)>']
[2025-10-20 07:54:26] 2025-10-20 11:54:21,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 07:54:26] 2025-10-20 11:54:21,972 | INFO     | [monitor] control thread has ended
[2025-10-20 07:54:26] 2025-10-20 11:54:26,188 | INFO     | all workflow threads have been joined
[2025-10-20 07:54:26] 2025-10-20 11:54:26,189 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 07:54:26] 2025-10-20 11:54:26,189 | INFO     | traces error code: 0
[2025-10-20 07:54:26] 2025-10-20 11:54:26,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 07:54:26] 2025-10-20 11:54:26,414 [wrapper] ==== pilot stdout END ====
[2025-10-20 07:54:26] 2025-10-20 11:54:26,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 07:54:26] 2025-10-20 11:54:26,421 [wrapper] pilotpid: 2647308
[2025-10-20 07:54:26] 2025-10-20 11:54:26,424 [wrapper] Pilot exit status: 0
[2025-10-20 07:54:26] 2025-10-20 11:54:26,456 [wrapper] pandaids: 6852299209
[2025-10-20 07:54:26] 2025-10-20 11:54:26,520 [wrapper] cleanup supervisor_pilot 3452103 2647309
[2025-10-20 07:54:26] 2025-10-20 11:54:26,524 [wrapper] Test setup, not cleaning
[2025-10-20 07:54:26] 2025-10-20 11:54:26,527 [wrapper] apfmon messages muted
[2025-10-20 07:54:26] 2025-10-20 11:54:26,530 [wrapper] ==== wrapper stdout END ====
[2025-10-20 07:54:26] 2025-10-20 11:54:26,533 [wrapper] ==== wrapper stderr END ====
[2025-10-20 07:54:26]  *** Error codes and diagnostics ***
[2025-10-20 07:54:26]     "exeErrorCode": 0,
[2025-10-20 07:54:26]     "exeErrorDiag": "",
[2025-10-20 07:54:26]     "pilotErrorCode": 0,
[2025-10-20 07:54:26]     "pilotErrorDiag": "",
[2025-10-20 07:54:26]  *** Listing of results directory ***
[2025-10-20 07:54:26] total 338864
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 02:47 pilot3.tar.gz
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 02:51 queuedata.json
[2025-10-20 07:54:26] -rwx------. 1 boincer umatlas     36292 Oct 20 02:51 runpilot2-wrapper.sh
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas       100 Oct 20 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 07:54:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 02:55 run_atlas
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas       105 Oct 20 02:55 job.xml
[2025-10-20 07:54:26] -rw-r--r--. 2 boincer umatlas 189542180 Oct 20 02:55 EVNT.46808900._000237.pool.root.1
[2025-10-20 07:54:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 02:55 start_atlas.sh
[2025-10-20 07:54:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 02:55 shared
[2025-10-20 07:54:26] -rw-r--r--. 2 boincer umatlas    569675 Oct 20 02:55 input.tar.gz
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas         0 Oct 20 02:55 boinc_lockfile
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas      2506 Oct 20 02:55 pandaJob.out
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas    976369 Oct 20 02:55 agis_schedconf.cvmfs.json
[2025-10-20 07:54:26] drwx------. 5 boincer umatlas      4096 Oct 20 02:55 pilot3
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas      6659 Oct 20 07:45 init_data.xml
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas 147836886 Oct 20 07:52 HITS.46808902._006027.pool.root.1
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas       531 Oct 20 07:52 boinc_task_state.xml
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas        95 Oct 20 07:53 pilot_heartbeat.json
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas      1041 Oct 20 07:53 memory_monitor_summary.json
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas   1560740 Oct 20 07:53 agis_ddmendpoints.agis.ALL.json
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas    516266 Oct 20 07:53 log.46808902._006027.job.log.tgz.1
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas      7816 Oct 20 07:53 heartbeat.json
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 07:53 boinc_mmap_file
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas        28 Oct 20 07:53 wrapper_checkpoint.txt
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas      5010 Oct 20 07:54 pilotlog.txt
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas   2339201 Oct 20 07:54 log.46808902._006027.job.log.1
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas       357 Oct 20 07:54 output.list
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas       620 Oct 20 07:54 runtime_log
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas   2877440 Oct 20 07:54 result.tar.gz
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas      8694 Oct 20 07:54 runtime_log.err
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas       653 Oct 20 07:54 4vqLDmVvyU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcFdMDmMQqnQo.diag
[2025-10-20 07:54:26] -rw-r--r--. 1 boincer umatlas     20995 Oct 20 07:54 stderr.txt
[2025-10-20 07:54:26] HITS file was successfully produced:
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas 147836886 Oct 20 07:52 shared/HITS.pool.root.1
[2025-10-20 07:54:26]  *** Contents of shared directory: ***
[2025-10-20 07:54:26] total 332864
[2025-10-20 07:54:26] -rw-r--r--. 2 boincer umatlas 189542180 Oct 20 02:55 ATLAS.root_0
[2025-10-20 07:54:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 02:55 start_atlas.sh
[2025-10-20 07:54:26] -rw-r--r--. 2 boincer umatlas    569675 Oct 20 02:55 input.tar.gz
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas 147836886 Oct 20 07:52 HITS.pool.root.1
[2025-10-20 07:54:26] -rw-------. 1 boincer umatlas   2877440 Oct 20 07:54 result.tar.gz
07:54:28 (2642519): run_atlas exited; CPU time 39256.690526
07:54:28 (2642519): called boinc_finish(0)

</stderr_txt>
]]>

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