Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:54:44 (1110431): wrapper (7.7.26015): starting
02:54:44 (1110431): wrapper: running run_atlas (--nthreads 12)
[2025-10-20 02:54:45] Arguments: --nthreads 12
[2025-10-20 02:54:45] Threads: 12
[2025-10-20 02:54:45] Checking for CVMFS
[2025-10-20 02:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 02:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 02:54:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 02:54:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 02:54:47] 2.13.2.0 3821245 140448 307248 151914 1 450 13194180 21042176 17745 16776704 0 125172059 99.452 179106924 30294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-20 02:54:47] CVMFS is ok
[2025-10-20 02:54:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 02:54:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 02:54:47] Further information can be found at the LHC@home message board.
[2025-10-20 02:54:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 02:54:47] Checking for apptainer binary...
[2025-10-20 02:54:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 02:54:47] Running /usr/bin/apptainer --version
[2025-10-20 02:54:48] apptainer version 1.4.2-1.el9
[2025-10-20 02:54:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 02:54:49] c-6-1.aglt2.org
[2025-10-20 02:54:49] apptainer works
[2025-10-20 02:54:49] Set ATHENA_PROC_NUMBER=12
[2025-10-20 02:54:49] Set ATHENA_CORE_NUMBER=12
[2025-10-20 02:54:49] Starting ATLAS job with PandaID=6852297335
[2025-10-20 02:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 04:58:19]  *** The last 200 lines of the pilot log: ***
[2025-10-20 04:58:19] 2025-10-20 08:57:46,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,316 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-20 04:58:19] 2025-10-20 08:57:46,323 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2660.1625000000017
[2025-10-20 04:58:19] 2025-10-20 08:57:46,330 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852297335/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,331 | INFO     | extracted standard info from prmon json
[2025-10-20 04:58:19] 2025-10-20 08:57:46,331 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 04:58:19] 2025-10-20 08:57:46,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 04:58:19] 2025-10-20 08:57:46,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 04:58:19] 2025-10-20 08:57:46,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 04:58:19] 2025-10-20 08:57:46,335 | INFO     | fitting pss+swap vs Time
[2025-10-20 04:58:19] 2025-10-20 08:57:46,335 | INFO     | sum of square deviations: 509495520.33898443
[2025-10-20 04:58:19] 2025-10-20 08:57:46,336 | INFO     | sum of deviations: 21170437169.98304
[2025-10-20 04:58:19] 2025-10-20 08:57:46,336 | INFO     | mean x: 1760947069.118644
[2025-10-20 04:58:19] 2025-10-20 08:57:46,336 | INFO     | mean y: 2301695.6440677964
[2025-10-20 04:58:19] 2025-10-20 08:57:46,337 | INFO     | -- intersect: -73168153780.8602
[2025-10-20 04:58:19] 2025-10-20 08:57:46,337 | INFO     | intersect: -73168153780.8602
[2025-10-20 04:58:19] 2025-10-20 08:57:46,337 | INFO     | chi2: 3.008341849085208
[2025-10-20 04:58:19] 2025-10-20 08:57:46,337 | INFO     | sum of square deviations: 447453852.12389314
[2025-10-20 04:58:19] 2025-10-20 08:57:46,338 | INFO     | sum of deviations: 28112920801.371677
[2025-10-20 04:58:19] 2025-10-20 08:57:46,338 | INFO     | mean x: 1760946916.6371682
[2025-10-20 04:58:19] 2025-10-20 08:57:46,338 | INFO     | mean y: 2318113.9115044246
[2025-10-20 04:58:19] 2025-10-20 08:57:46,338 | INFO     | -- intersect: -110635596763.47139
[2025-10-20 04:58:19] 2025-10-20 08:57:46,338 | INFO     | intersect: -110635596763.47139
[2025-10-20 04:58:19] 2025-10-20 08:57:46,339 | INFO     | chi2: 2.3201151263074817
[2025-10-20 04:58:19] 2025-10-20 08:57:46,339 | INFO     | current chi2=2.3201151263074817 (change=22.87727782622197 %)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,339 | INFO     | right removable region: 112
[2025-10-20 04:58:19] 2025-10-20 08:57:46,339 | INFO     | sum of square deviations: 447416275.84070843
[2025-10-20 04:58:19] 2025-10-20 08:57:46,340 | INFO     | sum of deviations: -2052865351.433629
[2025-10-20 04:58:19] 2025-10-20 08:57:46,340 | INFO     | mean x: 1760947221.6460178
[2025-10-20 04:58:19] 2025-10-20 08:57:46,340 | INFO     | mean y: 2358121.8141592923
[2025-10-20 04:58:19] 2025-10-20 08:57:46,340 | INFO     | -- intersect: 8082054217.4194355
[2025-10-20 04:58:19] 2025-10-20 08:57:46,341 | INFO     | intersect: 8082054217.4194355
[2025-10-20 04:58:19] 2025-10-20 08:57:46,341 | INFO     | chi2: 0.9710749575087797
[2025-10-20 04:58:19] 2025-10-20 08:57:46,341 | INFO     | current chi2=0.9710749575087797 (change=67.72059140140377 %)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,341 | INFO     | sum of square deviations: 390599592.9999988
[2025-10-20 04:58:19] 2025-10-20 08:57:46,342 | INFO     | sum of deviations: -7027240680.333333
[2025-10-20 04:58:19] 2025-10-20 08:57:46,342 | INFO     | mean x: 1760947374.1666667
[2025-10-20 04:58:19] 2025-10-20 08:57:46,342 | INFO     | mean y: 2371212.574074074
[2025-10-20 04:58:19] 2025-10-20 08:57:46,342 | INFO     | -- intersect: 31683410428.788006
[2025-10-20 04:58:19] 2025-10-20 08:57:46,342 | INFO     | intersect: 31683410428.788006
[2025-10-20 04:58:19] 2025-10-20 08:57:46,343 | INFO     | chi2: 0.8400236383615449
[2025-10-20 04:58:19] 2025-10-20 08:57:46,343 | INFO     | current chi2=0.8400236383615449 (change=13.495489522604634 %)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,343 | INFO     | left removable region: 20
[2025-10-20 04:58:19] 2025-10-20 08:57:46,343 | INFO     | sum of square deviations: 241444093.6521737
[2025-10-20 04:58:19] 2025-10-20 08:57:46,344 | INFO     | sum of deviations: 5403367191.043481
[2025-10-20 04:58:19] 2025-10-20 08:57:46,344 | INFO     | mean x: 1760947496.2173913
[2025-10-20 04:58:19] 2025-10-20 08:57:46,344 | INFO     | mean y: 2376369.847826087
[2025-10-20 04:58:19] 2025-10-20 08:57:46,344 | INFO     | -- intersect: -39406522735.04669
[2025-10-20 04:58:19] 2025-10-20 08:57:46,344 | INFO     | intersect: -39406522735.04669
[2025-10-20 04:58:19] 2025-10-20 08:57:46,345 | INFO     | chi2: 0.02349617170584317
[2025-10-20 04:58:19] 2025-10-20 08:57:46,345 | INFO     | -- intersect: -39406522735.04669
[2025-10-20 04:58:19] 2025-10-20 08:57:46,345 | INFO     | current memory leak: 22.38 B/s (using 92 data points, chi2=0.02)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | could have reported an average CPU frequency of 2610 MHz (8 samples)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | ..............................
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | . Timing measurements:
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | . get job = 0 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | . initial setup = 6 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | . payload setup = 47 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,346 | INFO     | . stage-in = 0 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,347 | INFO     | . payload execution = 7181 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,347 | INFO     | . stage-out = 0 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,347 | INFO     | . log creation = 0 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,347 | INFO     | ..............................
[2025-10-20 04:58:19] 2025-10-20 08:57:46,468 | INFO     | 
[2025-10-20 04:58:19] 2025-10-20 08:57:46,468 | INFO     | job summary report
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | --------------------------------------------------
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | PanDA job id: 6852297335
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | task id: 46808902
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | errors: (none)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | pilot state: finished 
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | transexitcode: 0
[2025-10-20 04:58:19] 2025-10-20 08:57:46,469 | INFO     | exeerrorcode: 0
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | exeerrordiag: 
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | exitcode: 0
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | exitmsg: OK
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | cpuconsumptiontime: 37465 s
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | nevents: 400
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | neventsw: 0
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | pid: 1127913
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | pgrp: 1127913
[2025-10-20 04:58:19] 2025-10-20 08:57:46,470 | INFO     | corecount: 12
[2025-10-20 04:58:19] 2025-10-20 08:57:46,471 | INFO     | event service: False
[2025-10-20 04:58:19] 2025-10-20 08:57:46,471 | INFO     | sizes: {0: 2348681, 1: 2348709, 2: 2348880, 14: 2348908, 25: 2348936, 28: 2349226, 35: 2349382, 7233: 2376559, 7234: 2385557, 7237: 2385613, 7248: 2385831}
[2025-10-20 04:58:19] 2025-10-20 08:57:46,471 | INFO     | --------------------------------------------------
[2025-10-20 04:58:19] 2025-10-20 08:57:46,471 | INFO     | 
[2025-10-20 04:58:19] 2025-10-20 08:57:46,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-20 04:58:19] 2025-10-20 08:57:46,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,496 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,496 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 04:58:19] 2025-10-20 08:57:46,499 | INFO     | job 6852297335 has completed (purged errors)
[2025-10-20 04:58:19] 2025-10-20 08:57:46,499 | INFO     | overall cleanup function is called
[2025-10-20 04:58:19] 2025-10-20 08:57:47,508 | INFO     | --- collectZombieJob: --- 10, [1127913]
[2025-10-20 04:58:19] 2025-10-20 08:57:47,508 | INFO     | zombie collector waiting for pid 1127913
[2025-10-20 04:58:19] 2025-10-20 08:57:47,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 04:58:19] 2025-10-20 08:57:47,508 | INFO     | collected zombie processes
[2025-10-20 04:58:19] 2025-10-20 08:57:47,508 | INFO     | will attempt to kill all subprocesses of pid=1127913
[2025-10-20 04:58:19] 2025-10-20 08:57:47,829 | INFO     | process IDs to be killed: [1127913] (in reverse order)
[2025-10-20 04:58:19] 2025-10-20 08:57:47,927 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 04:58:19] 2025-10-20 08:57:47,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 04:58:19] 2025-10-20 08:57:47,939 | INFO     | did not find any defunct processes belonging to 1127913
[2025-10-20 04:58:19] 2025-10-20 08:57:47,951 | INFO     | did not find any defunct processes belonging to 1127913
[2025-10-20 04:58:19] 2025-10-20 08:57:47,952 | INFO     | ready for new job
[2025-10-20 04:58:19] 2025-10-20 08:57:47,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 04:58:19] 2025-10-20 08:57:47,954 | INFO     | ***************************************
[2025-10-20 04:58:19] 2025-10-20 08:57:47,955 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 04:58:19] 2025-10-20 08:57:47,955 | INFO     | ***************************************
[2025-10-20 04:58:19] 2025-10-20 08:57:47,955 | INFO     | 
[2025-10-20 04:58:19] 2025-10-20 08:57:47,970 | INFO     | architecture information:
[2025-10-20 04:58:19] 2025-10-20 08:57:47,971 | INFO     | executing command: cat /etc/os-release
[2025-10-20 04:58:19] 2025-10-20 08:57:47,986 | INFO     | cat /etc/os-release:
[2025-10-20 04:58:19] NAME="CentOS Linux"
[2025-10-20 04:58:19] VERSION="7 (Core)"
[2025-10-20 04:58:19] ID="centos"
[2025-10-20 04:58:19] ID_LIKE="rhel fedora"
[2025-10-20 04:58:19] VERSION_ID="7"
[2025-10-20 04:58:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 04:58:19] ANSI_COLOR="0;31"
[2025-10-20 04:58:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 04:58:19] HOME_URL="https://www.centos.org/"
[2025-10-20 04:58:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 04:58:19] 
[2025-10-20 04:58:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 04:58:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 04:58:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 04:58:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 04:58:19] 
[2025-10-20 04:58:19] 2025-10-20 08:57:47,986 | INFO     | ***************************************
[2025-10-20 04:58:19] 2025-10-20 08:57:48,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-20 04:58:19] 2025-10-20 08:57:48,511 | INFO     | sufficient remaining disk space (53932457984 B)
[2025-10-20 04:58:19] 2025-10-20 08:57:48,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 04:58:19] 2025-10-20 08:57:48,511 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 04:58:19] 2025-10-20 08:57:48,511 | INFO     | update_server=False
[2025-10-20 04:58:19] 2025-10-20 08:57:48,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 04:58:19] 2025-10-20 08:57:48,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 04:58:19] 2025-10-20 08:57:48,532 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-20 04:58:19] 2025-10-20 08:57:48,532 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-20 04:58:19] 2025-10-20 08:57:48,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 04:58:19] 2025-10-20 08:57:48,532 | INFO     | will abort loop
[2025-10-20 04:58:19] 2025-10-20 08:57:48,943 | INFO     | all job control threads have been joined
[2025-10-20 04:58:19] 2025-10-20 08:57:49,517 | INFO     | [job] retrieve thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:49,530 | INFO     | all data control threads have been joined
[2025-10-20 04:58:19] 2025-10-20 08:57:49,537 | INFO     | [job] job monitor thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:49,593 | INFO     | [payload] failed_post thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:49,739 | INFO     | [job] validate thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:49,746 | INFO     | all payload control threads have been joined
[2025-10-20 04:58:19] 2025-10-20 08:57:49,948 | INFO     | [job] control thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 04:58:19] 2025-10-20 08:57:50,133 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,150 | INFO     | [payload] validate_post thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,454 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,519 | INFO     | [data] copytool_out thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,537 | INFO     | [data] control thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,548 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,593 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,737 | INFO     | [data] copytool_in thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:50,751 | INFO     | [payload] control thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:51,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 04:58:19] 2025-10-20 08:57:52,482 | INFO     | [job] queue monitor thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:57:54,094 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 04:58:19] 2025-10-20 08:58:04,179 | INFO     | [monitor] cgroup control has ended
[2025-10-20 04:58:19] 2025-10-20 08:58:05,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491623233344)>', '<ExcThread(monitor, started 140491349792512)>']
[2025-10-20 04:58:19] 2025-10-20 08:58:10,355 | INFO     | all workflow threads have been joined
[2025-10-20 04:58:19] 2025-10-20 08:58:10,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 04:58:19] 2025-10-20 08:58:10,355 | INFO     | traces error code: 0
[2025-10-20 04:58:19] 2025-10-20 08:58:10,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 04:58:19] 2025-10-20 08:58:19,324 | INFO     | PID=1119681 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-20 04:58:19] 2025-10-20 08:58:19,325 | INFO     | .. there are 25 such processes running
[2025-10-20 04:58:19] 2025-10-20 08:58:19,325 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 04:58:19] 2025-10-20 08:58:19,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 04:58:19] 2025-10-20 08:58:19,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 04:58:19] 2025-10-20 08:58:19,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 04:58:19] 2025-10-20 08:58:19,326 | INFO     | [monitor] control thread has ended
[2025-10-20 04:58:19] 2025-10-20 08:58:19,472 [wrapper] ==== pilot stdout END ====
[2025-10-20 04:58:19] 2025-10-20 08:58:19,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 04:58:19] 2025-10-20 08:58:19,481 [wrapper] pilotpid: 1119681
[2025-10-20 04:58:19] 2025-10-20 08:58:19,483 [wrapper] Pilot exit status: 0
[2025-10-20 04:58:19] 2025-10-20 08:58:19,496 [wrapper] pandaids: 6852297335
[2025-10-20 04:58:19] 2025-10-20 08:58:19,563 [wrapper] cleanup supervisor_pilot 1565720 1119682
[2025-10-20 04:58:19] 2025-10-20 08:58:19,567 [wrapper] Test setup, not cleaning
[2025-10-20 04:58:19] 2025-10-20 08:58:19,571 [wrapper] apfmon messages muted
[2025-10-20 04:58:19] 2025-10-20 08:58:19,574 [wrapper] ==== wrapper stdout END ====
[2025-10-20 04:58:19] 2025-10-20 08:58:19,577 [wrapper] ==== wrapper stderr END ====
[2025-10-20 04:58:19]  *** Error codes and diagnostics ***
[2025-10-20 04:58:19]     "exeErrorCode": 0,
[2025-10-20 04:58:19]     "exeErrorDiag": "",
[2025-10-20 04:58:19]     "pilotErrorCode": 0,
[2025-10-20 04:58:19]     "pilotErrorDiag": "",
[2025-10-20 04:58:19]  *** Listing of results directory ***
[2025-10-20 04:58:19] total 339036
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 02:47 pilot3.tar.gz
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 02:51 queuedata.json
[2025-10-20 04:58:19] -rwx------. 1 boincer umatlas     36292 Oct 20 02:51 runpilot2-wrapper.sh
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas       100 Oct 20 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 04:58:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 20 02:54 run_atlas
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas       105 Oct 20 02:54 job.xml
[2025-10-20 04:58:19] -rw-r--r--. 2 boincer umatlas 190228576 Oct 20 02:54 EVNT.46808900._000215.pool.root.1
[2025-10-20 04:58:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 02:54 start_atlas.sh
[2025-10-20 04:58:19] drwxrwx--x. 2 boincer umatlas      4096 Oct 20 02:54 shared
[2025-10-20 04:58:19] -rw-r--r--. 2 boincer umatlas    569674 Oct 20 02:54 input.tar.gz
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas         0 Oct 20 02:54 boinc_lockfile
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas      2506 Oct 20 02:54 pandaJob.out
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas    976369 Oct 20 02:55 agis_schedconf.cvmfs.json
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas   1560740 Oct 20 02:55 agis_ddmendpoints.agis.ALL.json
[2025-10-20 04:58:19] drwx------. 5 boincer umatlas      4096 Oct 20 02:55 pilot3
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas      6655 Oct 20 04:54 init_data.xml
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas 150304690 Oct 20 04:56 HITS.46808902._005480.pool.root.1
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas       529 Oct 20 04:57 boinc_task_state.xml
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas        95 Oct 20 04:57 pilot_heartbeat.json
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas      1054 Oct 20 04:57 memory_monitor_summary.json
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas    432014 Oct 20 04:57 log.46808902._005480.job.log.tgz.1
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas      7814 Oct 20 04:57 heartbeat.json
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas      8192 Oct 20 04:58 boinc_mmap_file
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas        27 Oct 20 04:58 wrapper_checkpoint.txt
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas       823 Oct 20 04:58 pilotlog.txt
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas    937223 Oct 20 04:58 log.46808902._005480.job.log.1
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas       357 Oct 20 04:58 output.list
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas       620 Oct 20 04:58 runtime_log
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas   1392640 Oct 20 04:58 result.tar.gz
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas      8690 Oct 20 04:58 runtime_log.err
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas       650 Oct 20 04:58 NZcKDmAvyU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcDdMDmYLcBon.diag
[2025-10-20 04:58:19] -rw-r--r--. 1 boincer umatlas     21242 Oct 20 04:58 stderr.txt
[2025-10-20 04:58:19] HITS file was successfully produced:
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas 150304690 Oct 20 04:56 shared/HITS.pool.root.1
[2025-10-20 04:58:19]  *** Contents of shared directory: ***
[2025-10-20 04:58:19] total 334496
[2025-10-20 04:58:19] -rw-r--r--. 2 boincer umatlas 190228576 Oct 20 02:54 ATLAS.root_0
[2025-10-20 04:58:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 20 02:54 start_atlas.sh
[2025-10-20 04:58:19] -rw-r--r--. 2 boincer umatlas    569674 Oct 20 02:54 input.tar.gz
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas 150304690 Oct 20 04:56 HITS.pool.root.1
[2025-10-20 04:58:19] -rw-------. 1 boincer umatlas   1392640 Oct 20 04:58 result.tar.gz
04:58:20 (1110431): run_atlas exited; CPU time 37694.680090
04:58:20 (1110431): called boinc_finish(0)

</stderr_txt>
]]>

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