Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:54:40 (23745): wrapper (7.7.26015): starting
02:54:40 (23745): wrapper: running run_atlas (--nthreads 12)
[2025-10-20 02:54:40] Arguments: --nthreads 12
[2025-10-20 02:54:40] Threads: 12
[2025-10-20 02:54:40] Checking for CVMFS
[2025-10-20 02:54:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 02:54:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 02:54:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 02:54:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 02:54:40] 2.11.2.0 2991 234022 100760 151914 0 1 10916222 20275201 1 130560 1 115812462 99.984 13834053 12726 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 02:54:40] CVMFS is ok
[2025-10-20 02:54:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 02:54:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 02:54:40] Further information can be found at the LHC@home message board.
[2025-10-20 02:54:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 02:54:40] Checking for apptainer binary...
[2025-10-20 02:54:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 02:54:40] Running /usr/bin/apptainer --version
[2025-10-20 02:54:40] apptainer version 1.3.2-1.el7
[2025-10-20 02:54:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 02:54:42] c-205-32.aglt2.org
[2025-10-20 02:54:42] apptainer works
[2025-10-20 02:54:42] Set ATHENA_PROC_NUMBER=12
[2025-10-20 02:54:42] Set ATHENA_CORE_NUMBER=12
[2025-10-20 02:54:42] Starting ATLAS job with PandaID=6852297334
[2025-10-20 02:54:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-20 03:54:22]  *** The last 200 lines of the pilot log: ***
[2025-10-20 03:54:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-20 03:54:22]  replicas=None
[2025-10-20 03:54:22]  scope=mc23_13p6TeV
[2025-10-20 03:54:22]  status=None
[2025-10-20 03:54:22]  status_code=0
[2025-10-20 03:54:22]  storage_token=
[2025-10-20 03:54:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6852297334/log.46808902._005479.job.log.tgz.1
[2025-10-20 03:54:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/ea/log.46808902._005479.job.log.tgz.1
[2025-10-20 03:54:22]  workdir=None
[2025-10-20 03:54:22] ]
[2025-10-20 03:54:22] 2025-10-20 07:53:45,638 | INFO     | transferring file log.46808902._005479.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6852297334/log.46808902._005479.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-20 03:54:22] 2025-10-20 07:53:45,639 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6852297334/log.46808902._005479.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._005479.job
[2025-10-20 03:54:22] 2025-10-20 07:53:45,660 | INFO     | adding to output.list: log.46808902._005479.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/ea/log.46808902._005479.job.log.tg
[2025-10-20 03:54:22] 2025-10-20 07:53:45,661 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-20 03:54:22] 2025-10-20 07:53:45,662 | INFO     | summary of transferred files:
[2025-10-20 03:54:22] 2025-10-20 07:53:45,662 | INFO     |  -- lfn=log.46808902._005479.job.log.tgz.1, status_code=0, status=transferred
[2025-10-20 03:54:22] 2025-10-20 07:53:45,662 | INFO     | stage-out finished correctly
[2025-10-20 03:54:22] 2025-10-20 07:53:45,749 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-20 03:54:22] 2025-10-20 07:53:45,831 | INFO     | job 6852297334 has state=finished
[2025-10-20 03:54:22] 2025-10-20 07:53:45,831 | INFO     | preparing for final server update for job 6852297334 in state='finished'
[2025-10-20 03:54:22] 2025-10-20 07:53:45,831 | INFO     | this job has now completed (state=finished)
[2025-10-20 03:54:22] 2025-10-20 07:53:45,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-20 03:54:22] 2025-10-20 07:53:45,832 | INFO     | log transfer has been attempted: DONE
[2025-10-20 03:54:22] 2025-10-20 07:53:45,832 | INFO     | job 6852297334 has finished - writing final server update
[2025-10-20 03:54:22] 2025-10-20 07:53:45,832 | INFO     | total number of processed events: 400 (read)
[2025-10-20 03:54:22] 2025-10-20 07:53:45,833 | INFO     | executing command: lscpu
[2025-10-20 03:54:22] 2025-10-20 07:53:45,860 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-20 03:54:22] 2025-10-20 07:53:46,275 | WARNING  | process 7522 can no longer be monitored (due to stat problems) - aborting
[2025-10-20 03:54:22] 2025-10-20 07:53:46,275 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852297334/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 03:54:22] 2025-10-20 07:53:46,363 | INFO     | number of running child processes to parent process 7522: 1
[2025-10-20 03:54:22] 2025-10-20 07:53:46,363 | INFO     | maximum number of monitored processes: 6
[2025-10-20 03:54:22] 2025-10-20 07:53:46,737 | INFO     | time since job start (3530s) is within the limit (172800.0s)
[2025-10-20 03:54:22] 2025-10-20 07:53:46,750 | INFO     | 3532s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-20 03:54:22] 2025-10-20 07:53:48,755 | INFO     | time since job start (3532s) is within the limit (172800.0s)
[2025-10-20 03:54:22] 2025-10-20 07:53:48,866 | INFO     | monitor loop #266: job 0:6852297334 is in state 'finished'
[2025-10-20 03:54:22] 2025-10-20 07:53:48,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,366 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-20 03:54:22] 2025-10-20 07:53:50,370 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.25
[2025-10-20 03:54:22] 2025-10-20 07:53:50,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852297334/memory_monitor_summary.json (trf name=prmon)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,372 | INFO     | extracted standard info from prmon json
[2025-10-20 03:54:22] 2025-10-20 07:53:50,373 | INFO     | extracted standard memory fields from prmon json
[2025-10-20 03:54:22] 2025-10-20 07:53:50,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-20 03:54:22] 2025-10-20 07:53:50,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-20 03:54:22] 2025-10-20 07:53:50,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-20 03:54:22] 2025-10-20 07:53:50,375 | INFO     | fitting pss+swap vs Time
[2025-10-20 03:54:22] 2025-10-20 07:53:50,375 | INFO     | sum of square deviations: 41117050.0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,376 | INFO     | sum of deviations: -3505785656.0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,376 | INFO     | mean x: 1760945154.0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,376 | INFO     | mean y: 2713260.843137255
[2025-10-20 03:54:22] 2025-10-20 07:53:50,376 | INFO     | -- intersect: 150147148766.2092
[2025-10-20 03:54:22] 2025-10-20 07:53:50,377 | INFO     | intersect: 150147148766.2092
[2025-10-20 03:54:22] 2025-10-20 07:53:50,377 | INFO     | chi2: 0.06969862436204191
[2025-10-20 03:54:22] 2025-10-20 07:53:50,377 | INFO     | -- intersect: 150147148766.2092
[2025-10-20 03:54:22] 2025-10-20 07:53:50,377 | INFO     | current memory leak: -85.26 B/s (using 51 data points, chi2=0.07)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | could have reported an average CPU frequency of 1977 MHz (5 samples)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | ..............................
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | . Timing measurements:
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | . get job = 0 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | . initial setup = 2 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | . payload setup = 6 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,378 | INFO     | . stage-in = 0 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,379 | INFO     | . payload execution = 3502 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,379 | INFO     | . stage-out = 0 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,379 | INFO     | . log creation = 0 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,379 | INFO     | ..............................
[2025-10-20 03:54:22] 2025-10-20 07:53:50,718 | INFO     | 
[2025-10-20 03:54:22] 2025-10-20 07:53:50,719 | INFO     | job summary report
[2025-10-20 03:54:22] 2025-10-20 07:53:50,719 | INFO     | --------------------------------------------------
[2025-10-20 03:54:22] 2025-10-20 07:53:50,719 | INFO     | PanDA job id: 6852297334
[2025-10-20 03:54:22] 2025-10-20 07:53:50,719 | INFO     | task id: 46808902
[2025-10-20 03:54:22] 2025-10-20 07:53:50,719 | INFO     | errors: (none)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-20 03:54:22] 2025-10-20 07:53:50,720 | INFO     | pilot state: finished 
[2025-10-20 03:54:22] 2025-10-20 07:53:50,720 | INFO     | transexitcode: 0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,720 | INFO     | exeerrorcode: 0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,720 | INFO     | exeerrordiag: 
[2025-10-20 03:54:22] 2025-10-20 07:53:50,720 | INFO     | exitcode: 0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,721 | INFO     | exitmsg: OK
[2025-10-20 03:54:22] 2025-10-20 07:53:50,721 | INFO     | cpuconsumptiontime: 35842 s
[2025-10-20 03:54:22] 2025-10-20 07:53:50,721 | INFO     | nevents: 400
[2025-10-20 03:54:22] 2025-10-20 07:53:50,721 | INFO     | neventsw: 0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,721 | INFO     | pid: 7522
[2025-10-20 03:54:22] 2025-10-20 07:53:50,721 | INFO     | pgrp: 7522
[2025-10-20 03:54:22] 2025-10-20 07:53:50,722 | INFO     | corecount: 12
[2025-10-20 03:54:22] 2025-10-20 07:53:50,722 | INFO     | event service: False
[2025-10-20 03:54:22] 2025-10-20 07:53:50,722 | INFO     | sizes: {0: 2348681, 1: 2348880, 5: 2349142, 11: 2349198, 3512: 2374772, 3513: 2383954, 3518: 2384124}
[2025-10-20 03:54:22] 2025-10-20 07:53:50,722 | INFO     | --------------------------------------------------
[2025-10-20 03:54:22] 2025-10-20 07:53:50,722 | INFO     | 
[2025-10-20 03:54:22] 2025-10-20 07:53:50,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-20 03:54:22] 2025-10-20 07:53:50,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-20 03:54:22] 2025-10-20 07:53:50,750 | INFO     | job 6852297334 has completed (purged errors)
[2025-10-20 03:54:22] 2025-10-20 07:53:50,750 | INFO     | overall cleanup function is called
[2025-10-20 03:54:22] 2025-10-20 07:53:51,759 | INFO     | --- collectZombieJob: --- 10, [7522]
[2025-10-20 03:54:22] 2025-10-20 07:53:51,759 | INFO     | zombie collector waiting for pid 7522
[2025-10-20 03:54:22] 2025-10-20 07:53:51,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-20 03:54:22] 2025-10-20 07:53:51,768 | INFO     | collected zombie processes
[2025-10-20 03:54:22] 2025-10-20 07:53:51,768 | INFO     | will attempt to kill all subprocesses of pid=7522
[2025-10-20 03:54:22] 2025-10-20 07:53:51,859 | INFO     | process IDs to be killed: [7522] (in reverse order)
[2025-10-20 03:54:22] 2025-10-20 07:53:51,907 | WARNING  | found no corresponding commands to process id(s)
[2025-10-20 03:54:22] 2025-10-20 07:53:51,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-20 03:54:22] 2025-10-20 07:53:51,911 | INFO     | did not find any defunct processes belonging to 7522
[2025-10-20 03:54:22] 2025-10-20 07:53:51,914 | INFO     | did not find any defunct processes belonging to 7522
[2025-10-20 03:54:22] 2025-10-20 07:53:51,915 | INFO     | ready for new job
[2025-10-20 03:54:22] 2025-10-20 07:53:51,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-20 03:54:22] 2025-10-20 07:53:51,917 | INFO     | ***************************************
[2025-10-20 03:54:22] 2025-10-20 07:53:51,917 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-20 03:54:22] 2025-10-20 07:53:51,917 | INFO     | ***************************************
[2025-10-20 03:54:22] 2025-10-20 07:53:51,917 | INFO     | 
[2025-10-20 03:54:22] 2025-10-20 07:53:51,918 | INFO     | architecture information:
[2025-10-20 03:54:22] 2025-10-20 07:53:51,918 | INFO     | executing command: cat /etc/os-release
[2025-10-20 03:54:22] 2025-10-20 07:53:51,933 | INFO     | cat /etc/os-release:
[2025-10-20 03:54:22] NAME="CentOS Linux"
[2025-10-20 03:54:22] VERSION="7 (Core)"
[2025-10-20 03:54:22] ID="centos"
[2025-10-20 03:54:22] ID_LIKE="rhel fedora"
[2025-10-20 03:54:22] VERSION_ID="7"
[2025-10-20 03:54:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-20 03:54:22] ANSI_COLOR="0;31"
[2025-10-20 03:54:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-20 03:54:22] HOME_URL="https://www.centos.org/"
[2025-10-20 03:54:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-20 03:54:22] 
[2025-10-20 03:54:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-20 03:54:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-20 03:54:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-20 03:54:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-20 03:54:22] 
[2025-10-20 03:54:22] 2025-10-20 07:53:51,933 | INFO     | ***************************************
[2025-10-20 03:54:22] 2025-10-20 07:53:52,436 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-20 03:54:22] 2025-10-20 07:53:52,453 | INFO     | sufficient remaining disk space (29472325632 B)
[2025-10-20 03:54:22] 2025-10-20 07:53:52,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-20 03:54:22] 2025-10-20 07:53:52,454 | INFO     | current server update state: UPDATING_FINAL
[2025-10-20 03:54:22] 2025-10-20 07:53:52,454 | INFO     | update_server=False
[2025-10-20 03:54:22] 2025-10-20 07:53:52,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-20 03:54:22] 2025-10-20 07:53:52,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-20 03:54:22] 2025-10-20 07:53:52,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-20 03:54:22] 2025-10-20 07:53:52,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-20 03:54:22] 2025-10-20 07:53:52,455 | INFO     | aborting loop
[2025-10-20 03:54:22] 2025-10-20 07:53:52,557 | INFO     | all job control threads have been joined
[2025-10-20 03:54:22] 2025-10-20 07:53:53,260 | INFO     | all payload control threads have been joined
[2025-10-20 03:54:22] 2025-10-20 07:53:53,460 | INFO     | [job] retrieve thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:53,461 | INFO     | [job] queue monitor thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:53,461 | INFO     | [job] job monitor thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:53,522 | INFO     | all data control threads have been joined
[2025-10-20 03:54:22] 2025-10-20 07:53:53,563 | INFO     | [job] control thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:53,607 | INFO     | [job] validate thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:53,608 | INFO     | [job] create_data_payload thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:53,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-20 03:54:22] 2025-10-20 07:53:53,970 | INFO     | [payload] validate_post thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:54,163 | INFO     | [payload] validate_pre thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:54,219 | INFO     | [data] copytool_in thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:54,260 | INFO     | [payload] control thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:54,527 | INFO     | [data] control thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:54,867 | INFO     | [payload] execute_payloads thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:54,989 | INFO     | [payload] failed_post thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:55,765 | INFO     | [data] copytool_out thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:53:56,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:54:02,108 | INFO     | [monitor] cgroup control has ended
[2025-10-20 03:54:22] 2025-10-20 07:54:03,372 | INFO     | job.realtimelogging is not enabled
[2025-10-20 03:54:22] 2025-10-20 07:54:04,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-20 03:54:22] 2025-10-20 07:54:06,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851881346880)>', '<ExcThread(monitor, started 139851307411200)>']
[2025-10-20 03:54:22] 2025-10-20 07:54:11,402 | INFO     | all workflow threads have been joined
[2025-10-20 03:54:22] 2025-10-20 07:54:11,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-20 03:54:22] 2025-10-20 07:54:11,410 | INFO     | traces error code: 0
[2025-10-20 03:54:22] 2025-10-20 07:54:11,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-20 03:54:22] 2025-10-20 07:54:21,946 | INFO     | PID=28098 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-20 03:54:22] 2025-10-20 07:54:21,946 | INFO     | found 0 job(s) in 20 queues
[2025-10-20 03:54:22] 2025-10-20 07:54:21,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-20 03:54:22] 2025-10-20 07:54:21,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-20 03:54:22] 2025-10-20 07:54:21,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-20 03:54:22] 2025-10-20 07:54:21,947 | INFO     | [monitor] control thread has ended
[2025-10-20 03:54:22] 2025-10-20 07:54:22,033 [wrapper] ==== pilot stdout END ====
[2025-10-20 03:54:22] 2025-10-20 07:54:22,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-20 03:54:22] 2025-10-20 07:54:22,039 [wrapper] pilotpid: 28098
[2025-10-20 03:54:22] 2025-10-20 07:54:22,043 [wrapper] Pilot exit status: 0
[2025-10-20 03:54:22] 2025-10-20 07:54:22,057 [wrapper] pandaids: 6852297334
[2025-10-20 03:54:22] 2025-10-20 07:54:22,096 [wrapper] cleanup supervisor_pilot 13230 28099
[2025-10-20 03:54:22] 2025-10-20 07:54:22,100 [wrapper] Test setup, not cleaning
[2025-10-20 03:54:22] 2025-10-20 07:54:22,103 [wrapper] apfmon messages muted
[2025-10-20 03:54:22] 2025-10-20 07:54:22,107 [wrapper] ==== wrapper stdout END ====
[2025-10-20 03:54:22] 2025-10-20 07:54:22,110 [wrapper] ==== wrapper stderr END ====
[2025-10-20 03:54:22]  *** Error codes and diagnostics ***
[2025-10-20 03:54:22]     "exeErrorCode": 0,
[2025-10-20 03:54:22]     "exeErrorDiag": "",
[2025-10-20 03:54:22]     "pilotErrorCode": 0,
[2025-10-20 03:54:22]     "pilotErrorDiag": "",
[2025-10-20 03:54:22]  *** Listing of results directory ***
[2025-10-20 03:54:22] total 332292
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 02:47 pilot3.tar.gz
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 20 02:51 queuedata.json
[2025-10-20 03:54:22] -rwx------ 1 boincer umatlas     36292 Oct 20 02:51 runpilot2-wrapper.sh
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas       100 Oct 20 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-20 03:54:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 20 02:54 run_atlas
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas       105 Oct 20 02:54 job.xml
[2025-10-20 03:54:22] -rw-r--r-- 2 boincer umatlas 190228576 Oct 20 02:54 EVNT.46808900._000215.pool.root.1
[2025-10-20 03:54:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 02:54 start_atlas.sh
[2025-10-20 03:54:22] drwxrwx--x 2 boincer umatlas      4096 Oct 20 02:54 shared
[2025-10-20 03:54:22] -rw-r--r-- 2 boincer umatlas    569670 Oct 20 02:54 input.tar.gz
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas         0 Oct 20 02:54 boinc_lockfile
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas      2506 Oct 20 02:54 pandaJob.out
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas    976369 Oct 20 02:54 agis_schedconf.cvmfs.json
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas   1560740 Oct 20 02:54 agis_ddmendpoints.agis.ALL.json
[2025-10-20 03:54:22] drwx------ 5 boincer umatlas      4096 Oct 20 02:54 pilot3
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas 144339447 Oct 20 03:53 HITS.46808902._005479.pool.root.1
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas       529 Oct 20 03:53 boinc_task_state.xml
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas      1047 Oct 20 03:53 memory_monitor_summary.json
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas        95 Oct 20 03:53 pilot_heartbeat.json
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas    380922 Oct 20 03:53 log.46808902._005479.job.log.tgz.1
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas      7852 Oct 20 03:53 heartbeat.json
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas      5953 Oct 20 03:54 init_data.xml
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 20 03:54 boinc_mmap_file
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas        27 Oct 20 03:54 wrapper_checkpoint.txt
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas       745 Oct 20 03:54 pilotlog.txt
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas    523006 Oct 20 03:54 log.46808902._005479.job.log.1
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas       357 Oct 20 03:54 output.list
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas       620 Oct 20 03:54 runtime_log
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas    921600 Oct 20 03:54 result.tar.gz
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas      8705 Oct 20 03:54 runtime_log.err
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas       659 Oct 20 03:54 LCbKDmAvyU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbDdMDmB7ehCn.diag
[2025-10-20 03:54:22] -rw-r--r-- 1 boincer umatlas     21839 Oct 20 03:54 stderr.txt
[2025-10-20 03:54:22] HITS file was successfully produced:
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas 144339447 Oct 20 03:53 shared/HITS.pool.root.1
[2025-10-20 03:54:22]  *** Contents of shared directory: ***
[2025-10-20 03:54:22] total 328208
[2025-10-20 03:54:22] -rw-r--r-- 2 boincer umatlas 190228576 Oct 20 02:54 ATLAS.root_0
[2025-10-20 03:54:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 02:54 start_atlas.sh
[2025-10-20 03:54:22] -rw-r--r-- 2 boincer umatlas    569670 Oct 20 02:54 input.tar.gz
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas 144339447 Oct 20 03:53 HITS.pool.root.1
[2025-10-20 03:54:22] -rw------- 1 boincer umatlas    921600 Oct 20 03:54 result.tar.gz
03:54:23 (23745): run_atlas exited; CPU time 35817.903435
03:54:23 (23745): called boinc_finish(0)

</stderr_txt>
]]>

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