Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:34:25 (1420145): wrapper (7.7.26015): starting
00:34:25 (1420145): wrapper: running run_atlas (--nthreads 4)
[2025-10-22 00:34:25] Arguments: --nthreads 4
[2025-10-22 00:34:25] Threads: 4
[2025-10-22 00:34:25] Checking for CVMFS
[2025-10-22 00:34:25] No cvmfs_config command found, will try listing directly
[2025-10-22 00:34:25] CVMFS is ok
[2025-10-22 00:34:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 00:34:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 00:34:25] Further information can be found at the LHC@home message board.
[2025-10-22 00:34:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 00:34:25] Checking for apptainer binary...
[2025-10-22 00:34:25] which: no apptainer in ((null))
[2025-10-22 00:34:25] apptainer is not installed, using version from CVMFS
[2025-10-22 00:34:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 00:34:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-22 00:34:25] apptainer works
[2025-10-22 00:34:25] Set ATHENA_PROC_NUMBER=4
[2025-10-22 00:34:25] Set ATHENA_CORE_NUMBER=4
[2025-10-22 00:34:25] Starting ATLAS job with PandaID=6852300052
[2025-10-22 00:34:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 03:44:55]  *** The last 200 lines of the pilot log: ***
[2025-10-22 03:44:55] 2025-10-22 01:31:06,780 | INFO     | time since job start (10590s) is within the limit (172800.0s)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,383 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-22 03:44:55] 2025-10-22 01:31:07,392 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2728.0928437499992
[2025-10-22 03:44:55] 2025-10-22 01:31:07,404 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6852300052/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,405 | INFO     | extracted standard info from prmon json
[2025-10-22 03:44:55] 2025-10-22 01:31:07,405 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 03:44:55] 2025-10-22 01:31:07,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 03:44:55] 2025-10-22 01:31:07,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 03:44:55] 2025-10-22 01:31:07,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 03:44:55] 2025-10-22 01:31:07,410 | INFO     | fitting pss+swap vs Time
[2025-10-22 03:44:55] 2025-10-22 01:31:07,410 | INFO     | sum of square deviations: 1605470102.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,411 | INFO     | sum of deviations: -22935663890.000004
[2025-10-22 03:44:55] 2025-10-22 01:31:07,412 | INFO     | mean x: 1761091349.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,412 | INFO     | mean y: 2382810.098265896
[2025-10-22 03:44:55] 2025-10-22 01:31:07,412 | INFO     | -- intersect: 25161243887.568954
[2025-10-22 03:44:55] 2025-10-22 01:31:07,412 | INFO     | intersect: 25161243887.568954
[2025-10-22 03:44:55] 2025-10-22 01:31:07,412 | INFO     | chi2: 1.45939241839465
[2025-10-22 03:44:55] 2025-10-22 01:31:07,413 | INFO     | sum of square deviations: 1470248962.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,414 | INFO     | sum of deviations: -21959228960.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,414 | INFO     | mean x: 1761091196.5
[2025-10-22 03:44:55] 2025-10-22 01:31:07,414 | INFO     | mean y: 2383911.6071428573
[2025-10-22 03:44:55] 2025-10-22 01:31:07,414 | INFO     | -- intersect: 26305551472.274906
[2025-10-22 03:44:55] 2025-10-22 01:31:07,414 | INFO     | intersect: 26305551472.274906
[2025-10-22 03:44:55] 2025-10-22 01:31:07,414 | INFO     | chi2: 1.4556258699473983
[2025-10-22 03:44:55] 2025-10-22 01:31:07,415 | INFO     | current chi2=1.4556258699473983 (change=0.2580901750466144 %)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,415 | INFO     | right removable region: 167
[2025-10-22 03:44:55] 2025-10-22 01:31:07,415 | INFO     | sum of square deviations: 1470248962.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,416 | INFO     | sum of deviations: -41016158195.999985
[2025-10-22 03:44:55] 2025-10-22 01:31:07,416 | INFO     | mean x: 1761091501.5
[2025-10-22 03:44:55] 2025-10-22 01:31:07,416 | INFO     | mean y: 2402790.345238095
[2025-10-22 03:44:55] 2025-10-22 01:31:07,416 | INFO     | -- intersect: 49132318532.571175
[2025-10-22 03:44:55] 2025-10-22 01:31:07,416 | INFO     | intersect: 49132318532.571175
[2025-10-22 03:44:55] 2025-10-22 01:31:07,417 | INFO     | chi2: 0.21424486164479437
[2025-10-22 03:44:55] 2025-10-22 01:31:07,417 | INFO     | current chi2=0.21424486164479437 (change=85.31958512704443 %)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,417 | INFO     | sum of square deviations: 1342841922.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,418 | INFO     | sum of deviations: -33801835511.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,418 | INFO     | mean x: 1761091654.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,418 | INFO     | mean y: 2394130.024539877
[2025-10-22 03:44:55] 2025-10-22 01:31:07,418 | INFO     | -- intersect: 44332355410.681465
[2025-10-22 03:44:55] 2025-10-22 01:31:07,418 | INFO     | intersect: 44332355410.681465
[2025-10-22 03:44:55] 2025-10-22 01:31:07,419 | INFO     | chi2: 0.19369719164094143
[2025-10-22 03:44:55] 2025-10-22 01:31:07,419 | INFO     | current chi2=0.19369719164094143 (change=9.590741101609144 %)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,419 | INFO     | left removable region: 20
[2025-10-22 03:44:55] 2025-10-22 01:31:07,419 | INFO     | sum of square deviations: 984941258.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,420 | INFO     | sum of deviations: -15582773910.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,420 | INFO     | mean x: 1761091776.0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,420 | INFO     | mean y: 2372112.680272109
[2025-10-22 03:44:55] 2025-10-22 01:31:07,420 | INFO     | -- intersect: 27864637762.80939
[2025-10-22 03:44:55] 2025-10-22 01:31:07,421 | INFO     | intersect: 27864637762.80939
[2025-10-22 03:44:55] 2025-10-22 01:31:07,421 | INFO     | chi2: 0.07668000686367504
[2025-10-22 03:44:55] 2025-10-22 01:31:07,421 | INFO     | -- intersect: 27864637762.80939
[2025-10-22 03:44:55] 2025-10-22 01:31:07,421 | INFO     | current memory leak: -15.82 B/s (using 147 data points, chi2=0.08)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | could have reported an average CPU frequency of 2695 MHz (9 samples)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | ..............................
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . Timing measurements:
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . get job = 0 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . initial setup = 1 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . payload setup = 6 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . stage-in = 0 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . payload execution = 10554 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,422 | INFO     | . stage-out = 0 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,423 | INFO     | . log creation = 0 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,423 | INFO     | ..............................
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | 
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | job summary report
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | --------------------------------------------------
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | PanDA job id: 6852300052
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | task id: 46776533
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | errors: (none)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 03:44:55] 2025-10-22 01:31:07,525 | INFO     | pilot state: finished 
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | transexitcode: 0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | exeerrorcode: 0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | exeerrordiag: 
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | exitcode: 0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | exitmsg: OK
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | cpuconsumptiontime: 40524 s
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | nevents: 400
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | neventsw: 0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | pid: 1430830
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | pgrp: 1430830
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | corecount: 4
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | event service: False
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | sizes: {0: 2348887, 5: 2349149, 11: 2349205, 10565: 2378063, 10566: 2387083, 10569: 2387139, 10576: 2387525}
[2025-10-22 03:44:55] 2025-10-22 01:31:07,526 | INFO     | --------------------------------------------------
[2025-10-22 03:44:55] 2025-10-22 01:31:07,527 | INFO     | 
[2025-10-22 03:44:55] 2025-10-22 01:31:07,527 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-10-22 03:44:55] 2025-10-22 01:31:07,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 03:44:55] 2025-10-22 01:31:07,549 | INFO     | job 6852300052 has completed (purged errors)
[2025-10-22 03:44:55] 2025-10-22 01:31:07,549 | INFO     | overall cleanup function is called
[2025-10-22 03:44:55] 2025-10-22 01:31:08,233 | INFO     | PID=1423915 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-22 03:44:55] 2025-10-22 01:31:08,233 | INFO     | .. there are 4 such processes running
[2025-10-22 03:44:55] 2025-10-22 01:31:08,557 | INFO     | --- collectZombieJob: --- 10, [1430830]
[2025-10-22 03:44:55] 2025-10-22 01:31:08,557 | INFO     | zombie collector waiting for pid 1430830
[2025-10-22 03:44:55] 2025-10-22 01:31:08,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 03:44:55] 2025-10-22 01:31:08,557 | INFO     | collected zombie processes
[2025-10-22 03:44:55] 2025-10-22 01:31:08,557 | INFO     | will attempt to kill all subprocesses of pid=1430830
[2025-10-22 03:44:55] 2025-10-22 01:31:08,922 | INFO     | process IDs to be killed: [1430830] (in reverse order)
[2025-10-22 03:44:55] 2025-10-22 01:31:09,028 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 03:44:55] 2025-10-22 01:31:09,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 03:44:55] 2025-10-22 01:31:09,040 | INFO     | did not find any defunct processes belonging to 1430830
[2025-10-22 03:44:55] 2025-10-22 01:31:09,052 | INFO     | did not find any defunct processes belonging to 1430830
[2025-10-22 03:44:55] 2025-10-22 01:31:09,052 | INFO     | ready for new job
[2025-10-22 03:44:55] 2025-10-22 01:31:09,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 03:44:55] 2025-10-22 01:31:09,054 | INFO     | ***************************************
[2025-10-22 03:44:55] 2025-10-22 01:31:09,054 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 03:44:55] 2025-10-22 01:31:09,054 | INFO     | ***************************************
[2025-10-22 03:44:55] 2025-10-22 01:31:09,054 | INFO     | 
[2025-10-22 03:44:55] 2025-10-22 01:31:09,058 | INFO     | architecture information:
[2025-10-22 03:44:55] 2025-10-22 01:31:09,059 | INFO     | executing command: cat /etc/os-release
[2025-10-22 03:44:55] 2025-10-22 01:31:09,075 | INFO     | cat /etc/os-release:
[2025-10-22 03:44:55] NAME="CentOS Linux"
[2025-10-22 03:44:55] VERSION="7 (Core)"
[2025-10-22 03:44:55] ID="centos"
[2025-10-22 03:44:55] ID_LIKE="rhel fedora"
[2025-10-22 03:44:55] VERSION_ID="7"
[2025-10-22 03:44:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 03:44:55] ANSI_COLOR="0;31"
[2025-10-22 03:44:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 03:44:55] HOME_URL="https://www.centos.org/"
[2025-10-22 03:44:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 03:44:55] 
[2025-10-22 03:44:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 03:44:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 03:44:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 03:44:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 03:44:55] 
[2025-10-22 03:44:55] 2025-10-22 01:31:09,075 | INFO     | ***************************************
[2025-10-22 03:44:55] 2025-10-22 01:31:09,578 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-10-22 03:44:55] 2025-10-22 01:31:09,594 | INFO     | sufficient remaining disk space (694326132736 B)
[2025-10-22 03:44:55] 2025-10-22 01:31:09,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 03:44:55] 2025-10-22 01:31:09,594 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 03:44:55] 2025-10-22 01:31:09,594 | INFO     | update_server=False
[2025-10-22 03:44:55] 2025-10-22 01:31:09,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 03:44:55] 2025-10-22 01:31:09,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 03:44:55] 2025-10-22 01:31:09,595 | INFO     | aborting loop
[2025-10-22 03:44:55] 2025-10-22 01:31:10,033 | INFO     | all data control threads have been joined
[2025-10-22 03:44:55] 2025-10-22 01:31:10,435 | INFO     | all payload control threads have been joined
[2025-10-22 03:44:55] 2025-10-22 01:31:10,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 03:44:55] 2025-10-22 01:31:10,600 | INFO     | [job] retrieve thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:10,600 | INFO     | [job] job monitor thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:10,638 | INFO     | all job control threads have been joined
[2025-10-22 03:44:55] 2025-10-22 01:31:10,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 03:44:55] 2025-10-22 01:31:11,035 | INFO     | [data] control thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,052 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,206 | INFO     | [payload] failed_post thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,440 | INFO     | [payload] control thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,561 | INFO     | [job] validate thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,643 | INFO     | [job] control thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,795 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:11,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:12,017 | INFO     | [data] copytool_in thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:12,046 | INFO     | [payload] validate_post thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:12,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 03:44:55] 2025-10-22 01:31:12,599 | INFO     | [data] copytool_out thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:13,538 | INFO     | [job] queue monitor thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:14,960 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 03:44:55] 2025-10-22 01:31:40,753 | INFO     | PID=1423915 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 03:44:55] 2025-10-22 01:31:40,753 | INFO     | .. there are 4 such processes running
[2025-10-22 03:44:55] 2025-10-22 01:31:40,754 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 03:44:55] 2025-10-22 01:31:40,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 03:44:55] 2025-10-22 01:31:40,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 03:44:55] 2025-10-22 01:31:52,126 | INFO     | [monitor] cgroup control has ended
[2025-10-22 03:44:55] 2025-10-22 01:31:52,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23413841098560)>', '<ExcThread(monitor, started 23413533943552)>']
[2025-10-22 03:44:55] 2025-10-22 01:31:52,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 03:44:55] 2025-10-22 01:31:52,811 | INFO     | [monitor] control thread has ended
[2025-10-22 03:44:55] 2025-10-22 01:31:57,566 | INFO     | all workflow threads have been joined
[2025-10-22 03:44:55] 2025-10-22 01:31:57,566 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 03:44:55] 2025-10-22 01:31:57,567 | INFO     | traces error code: 0
[2025-10-22 03:44:55] 2025-10-22 01:31:57,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 03:44:55] 2025-10-22 01:31:57,704 [wrapper] ==== pilot stdout END ====
[2025-10-22 03:44:55] 2025-10-22 01:31:57,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 03:44:55] 2025-10-22 01:31:57,708 [wrapper] pilotpid: 1423915
[2025-10-22 03:44:55] 2025-10-22 01:31:57,711 [wrapper] Pilot exit status: 0
[2025-10-22 03:44:55] 2025-10-22 01:31:57,721 [wrapper] pandaids: 6852300052
[2025-10-22 03:44:55] 2025-10-22 01:31:57,790 [wrapper] cleanup supervisor_pilot 1616594 1423916
[2025-10-22 03:44:55] 2025-10-22 01:31:57,793 [wrapper] Test setup, not cleaning
[2025-10-22 03:44:55] 2025-10-22 01:31:57,795 [wrapper] apfmon messages muted
[2025-10-22 03:44:55] 2025-10-22 01:31:57,798 [wrapper] ==== wrapper stdout END ====
[2025-10-22 03:44:55] 2025-10-22 01:31:57,801 [wrapper] ==== wrapper stderr END ====
[2025-10-22 03:44:55]  *** Error codes and diagnostics ***
[2025-10-22 03:44:55]     "exeErrorCode": 0,
[2025-10-22 03:44:55]     "exeErrorDiag": "",
[2025-10-22 03:44:55]     "pilotErrorCode": 0,
[2025-10-22 03:44:55]     "pilotErrorDiag": "",
[2025-10-22 03:44:55]  *** Listing of results directory ***
[2025-10-22 03:44:55] total 431232
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc    557409 Oct 20 08:47 pilot3.tar.gz
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc      5112 Oct 20 08:48 queuedata.json
[2025-10-22 03:44:55] -rwx------ 1 boinc boinc     36292 Oct 20 08:49 runpilot2-wrapper.sh
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc       100 Oct 22 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 03:44:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 00:34 run_atlas
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc       105 Oct 22 00:34 job.xml
[2025-10-22 03:44:55] -rw-r--r-- 2 boinc boinc 228091391 Oct 22 00:34 EVNT.46776529._000094.pool.root.1
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc      6635 Oct 22 00:34 init_data.xml
[2025-10-22 03:44:55] -rw-r--r-- 2 boinc boinc     15120 Oct 22 00:34 start_atlas.sh
[2025-10-22 03:44:55] drwxrwx--x 2 boinc boinc      4096 Oct 22 00:34 shared
[2025-10-22 03:44:55] -rw-r--r-- 2 boinc boinc    569681 Oct 22 00:34 input.tar.gz
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc         0 Oct 22 00:34 boinc_lockfile
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc      2559 Oct 22 00:34 pandaJob.out
[2025-10-22 03:44:55] -rw------- 1 boinc boinc    978456 Oct 22 00:34 agis_schedconf.cvmfs.json
[2025-10-22 03:44:55] -rw------- 1 boinc boinc   1560740 Oct 22 00:34 agis_ddmendpoints.agis.ALL.json
[2025-10-22 03:44:55] drwx------ 5 boinc boinc      4096 Oct 22 00:34 pilot3
[2025-10-22 03:44:55] -rw------- 1 boinc boinc 205875389 Oct 22 03:30 HITS.46776533._013262.pool.root.1
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc       528 Oct 22 03:30 boinc_task_state.xml
[2025-10-22 03:44:55] -rw------- 1 boinc boinc      1032 Oct 22 03:30 memory_monitor_summary.json
[2025-10-22 03:44:55] -rw------- 1 boinc boinc    348147 Oct 22 03:30 log.46776533._013262.job.log.tgz.1
[2025-10-22 03:44:55] -rw------- 1 boinc boinc      7828 Oct 22 03:31 heartbeat.json
[2025-10-22 03:44:55] -rw------- 1 boinc boinc        95 Oct 22 03:31 pilot_heartbeat.json
[2025-10-22 03:44:55] -rw------- 1 boinc boinc      4833 Oct 22 03:31 pilotlog.txt
[2025-10-22 03:44:55] -rw------- 1 boinc boinc   1505339 Oct 22 03:31 log.46776533._013262.job.log.1
[2025-10-22 03:44:55] -rw------- 1 boinc boinc       357 Oct 22 03:31 output.list
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc       620 Oct 22 03:31 runtime_log
[2025-10-22 03:44:55] -rw------- 1 boinc boinc   1873920 Oct 22 03:31 result.tar.gz
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc      9070 Oct 22 03:31 runtime_log.err
[2025-10-22 03:44:55] -rw------- 1 boinc boinc       665 Oct 22 03:31 S26MDm2syU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZoyNDmaFeWIm.diag
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc        26 Oct 22 03:44 wrapper_checkpoint.txt
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc      8192 Oct 22 03:44 boinc_mmap_file
[2025-10-22 03:44:55] -rw-r--r-- 1 boinc boinc     20975 Oct 22 03:44 stderr.txt
[2025-10-22 03:44:55] HITS file was successfully produced:
[2025-10-22 03:44:55] -rw------- 1 boinc boinc 205875389 Oct 22 03:30 shared/HITS.pool.root.1
[2025-10-22 03:44:55]  *** Contents of shared directory: ***
[2025-10-22 03:44:55] total 426216
[2025-10-22 03:44:55] -rw-r--r-- 2 boinc boinc 228091391 Oct 22 00:34 ATLAS.root_0
[2025-10-22 03:44:55] -rw-r--r-- 2 boinc boinc     15120 Oct 22 00:34 start_atlas.sh
[2025-10-22 03:44:55] -rw-r--r-- 2 boinc boinc    569681 Oct 22 00:34 input.tar.gz
[2025-10-22 03:44:55] -rw------- 1 boinc boinc 205875389 Oct 22 03:30 HITS.pool.root.1
[2025-10-22 03:44:55] -rw------- 1 boinc boinc   1873920 Oct 22 03:31 result.tar.gz
03:44:57 (1420145): run_atlas exited; CPU time 40978.748626
03:44:57 (1420145): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN