Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-20 09:06:00 (9500): vboxwrapper version 26210
2025-10-20 09:06:00 (9500): BOINC client version: 8.2.4
2025-10-20 09:06:01 (9500): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-20 09:06:01 (9500): Successfully copied 'init_data.xml' to the shared directory.
2025-10-20 09:06:01 (9500): Create VM. (boinc_2dd76af58dc68ce2, slot#5)
2025-10-20 09:06:02 (9500): Setting Memory Size for VM. (4800MB)
2025-10-20 09:06:02 (9500): Setting CPU Count for VM. (8)
2025-10-20 09:06:02 (9500): Setting Chipset Options for VM.
2025-10-20 09:06:03 (9500): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-20 09:06:03 (9500): Setting Boot Options for VM.
2025-10-20 09:06:03 (9500): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-20 09:06:04 (9500): Enabling VM Network Access.
2025-10-20 09:06:04 (9500): Disabling USB Support for VM.
2025-10-20 09:06:04 (9500): Disabling COM Port Support for VM.
2025-10-20 09:06:04 (9500): Disabling LPT Port Support for VM.
2025-10-20 09:06:05 (9500): Disabling Audio Support for VM.
2025-10-20 09:06:05 (9500): Disabling Clipboard Support for VM.
2025-10-20 09:06:05 (9500): Disabling Drag and Drop Support for VM.
2025-10-20 09:06:06 (9500): Adding storage controller(s) to VM.
2025-10-20 09:06:06 (9500): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-20 09:06:06 (9500): Adding VirtualBox Guest Additions to VM.
2025-10-20 09:06:07 (9500): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-20 09:06:07 (9500): forwarding host port 65067 to guest port 80
2025-10-20 09:06:07 (9500): Enabling remote desktop for VM.
2025-10-20 09:06:07 (9500): Required extension pack not installed, remote desktop not enabled.
2025-10-20 09:06:07 (9500): Enabling shared directory for VM.
2025-10-20 09:06:08 (9500): Starting VM using VBoxManage interface. (boinc_2dd76af58dc68ce2, slot#5)
2025-10-20 09:06:13 (9500): Successfully started VM. (PID = '1668')
2025-10-20 09:06:13 (9500): Reporting VM Process ID to BOINC.
2025-10-20 09:06:13 (9500): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-20 09:06:13 (9500): Guest Log: CPUID EDX: 0x178bfbff
2025-10-20 09:06:13 (9500): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-20 09:06:13 (9500): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-20 09:06:13 (9500): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-20 09:06:13 (9500): Detected: Web Application Enabled (http://localhost:65067)
2025-10-20 09:06:13 (9500): Preference change detected
2025-10-20 09:06:13 (9500): Setting CPU throttle for VM. (100%)
2025-10-20 09:06:14 (9500): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 30 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-20 09:06:15 (9500): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-20 09:06:15 (9500): Guest Log: BIOS: Booting from Hard Disk...
2025-10-20 09:06:18 (9500): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-20 09:06:18 (9500): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-20 09:06:18 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-20 09:06:23 (9500): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-20 09:06:23 (9500): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-20 09:06:29 (9500): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000264 main     Log opened 2025-10-20T09:06:28.191481000Z
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000499 main     OS Product: Linux
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000556 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000603 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000649 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000651 main     Process ID: 1377
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.000651 main     Package type: LINUX_64BITS_GENERIC
2025-10-20 09:06:29 (9500): Guest Log: 00:00:00.001594 main     5.2.32 r132073 started. Verbose level = 0
2025-10-20 09:06:29 (9500): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-20 09:06:29 (9500): Guest Log: [INFO] Mounting shared directory
2025-10-20 09:06:30 (9500): Guest Log: [INFO] Checking for init_data.xml
2025-10-20 09:06:34 (9500): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-20 09:06:34 (9500): Guest Log: [INFO] Detected branch: prod
2025-10-20 09:06:35 (9500): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-20 09:06:35 (9500): Guest Log: Copying input files
2025-10-20 09:06:36 (9500): Guest Log: Copied input files into RunAtlas.
2025-10-20 09:06:36 (9500): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-20 09:06:36 (9500): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-20 09:06:36 (9500): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-20 09:06:36 (9500): Guest Log: Further information can be found at the LHC@home message board.
2025-10-20 09:06:39 (9500): Guest Log: 00:00:10.006124 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 407 689 000ns (GuestNow=1 760 940 399 788 308 000 ns GuestLast=1 760 951 188 195 997 000 ns fSetTimeLastLoop=true )
2025-10-20 09:06:45 (9500): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-20 09:06:45 (9500): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-20 09:06:45 (9500): Guest Log: 2.6.3.0 1652 0 30348 151914 4 1 3120538 4096000 0 65024 0 0 n/a 1292 678 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-20 09:06:46 (9500): Guest Log: copied the webapp to /var/www
2025-10-20 09:06:46 (9500): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-20 09:06:46 (9500): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-20 09:06:47 (9500): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-20 09:06:47 (9500): Guest Log:  *** Starting ATLAS job. (PandaID=6847356317 taskID=46771637) ***
2025-10-20 10:46:19 (9500): Status Report: Elapsed Time: '6000.000000'
2025-10-20 10:46:19 (9500): Status Report: CPU Time: '44425.296875'
2025-10-20 11:21:00 (9500): Guest Log:  *** Job finished ***
2025-10-20 11:21:00 (9500): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:35,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:35,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:52,305 | INFO     | [monitor] cgroup control has ended
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:53,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192830453568)>', '<ExcThread(monitor, started 140192379803392)>']
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:53,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:53,775 | INFO     | [monitor] control thread has ended
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,274 | INFO     | all workflow threads have been joined
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,274 | INFO     | end of generic workflow (traces error code: 0)
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,274 | INFO     | traces error code: 0
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,371 [wrapper] ==== pilot stdout END ====
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,377 [wrapper] ==== wrapper stdout RESUME ====
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,383 [wrapper] pilotpid: 6085
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,389 [wrapper] Pilot exit status: 0
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,484 [wrapper] pandaids: 6847356317
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,527 [wrapper] cleanup supervisor_pilot  3791 6086
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,535 [wrapper] Test setup, not cleaning
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,543 [wrapper] apfmon messages muted
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,549 [wrapper] ==== wrapper stdout END ====
2025-10-20 11:21:00 (9500): Guest Log: 2025-10-20 08:20:58,554 [wrapper] ==== wrapper stderr END ====
2025-10-20 11:21:00 (9500): Guest Log:  *** Error codes and diagnostics ***
2025-10-20 11:21:00 (9500): Guest Log:     "exeErrorCode": 0,
2025-10-20 11:21:00 (9500): Guest Log:     "exeErrorDiag": "",
2025-10-20 11:21:00 (9500): Guest Log:     "pilotErrorCode": 0,
2025-10-20 11:21:00 (9500): Guest Log:     "pilotErrorDiag": "",
2025-10-20 11:21:00 (9500): Guest Log:  *** Listing of results directory ***
2025-10-20 11:21:00 (9500): Guest Log: total 214212
2025-10-20 11:21:00 (9500): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 17 09:46 pilot3.tar.gz
2025-10-20 11:21:00 (9500): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 17 10:02 queuedata.json
2025-10-20 11:21:00 (9500): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 17 10:03 runpilot2-wrapper.sh
2025-10-20 11:21:00 (9500): Guest Log: -rwxr-xr-x. 1 atlas atlas      8547 Oct 20 06:06 init_data.xml
2025-10-20 11:21:00 (9500): Guest Log: -rwxr-xr-x. 1 atlas atlas    569681 Oct 20 06:06 input.tar.gz
2025-10-20 11:21:00 (9500): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 20 06:06 start_atlas.sh
2025-10-20 11:21:00 (9500): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 20 06:06 EVNT.46771634._000904.pool.root.1 -> /data/./ATLAS.root_0
2025-10-20 11:21:00 (9500): Guest Log: -rw-r--r--. 1 atlas atlas      2553 Oct 20 06:06 pandaJob.out
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas    976369 Oct 20 06:07 agis_schedconf.cvmfs.json
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 20 06:07 agis_ddmendpoints.agis.ALL.json
2025-10-20 11:21:00 (9500): Guest Log: drwx------. 5 atlas atlas      4096 Oct 20 06:07 pilot3
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas 212688487 Oct 20 08:19 HITS.46771637._024069.pool.root.1
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 20 08:19 memory_monitor_summary.json
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas    352752 Oct 20 08:19 log.46771637._024069.job.log.tgz.1
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas      7789 Oct 20 08:20 heartbeat.json
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas        95 Oct 20 08:20 pilot_heartbeat.json
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas      4991 Oct 20 08:20 pilotlog.txt
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas   1063878 Oct 20 08:20 log.46771637._024069.job.log.1
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas       357 Oct 20 08:20 output.list
2025-10-20 11:21:00 (9500): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 20 08:20 runtime_log
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas   1433600 Oct 20 08:20 result.tar.gz
2025-10-20 11:21:00 (9500): Guest Log: -rw-r--r--. 1 atlas atlas      8629 Oct 20 08:20 runtime_log.err
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas       654 Oct 20 08:20 Cw3LDmTUwT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmx1ZMDmnbiSam.diag
2025-10-20 11:21:00 (9500): Guest Log: Looking for outputfile HITS.46771637._024069.pool.root.1
2025-10-20 11:21:00 (9500): Guest Log: HITS file was successfully produced
2025-10-20 11:21:00 (9500): Guest Log: -rw-------. 1 atlas atlas 212688487 Oct 20 08:19 /home/atlas/RunAtlas/HITS.46771637._024069.pool.root.1
2025-10-20 11:21:01 (9500): Guest Log: Successfully finished the ATLAS job!
2025-10-20 11:21:01 (9500): Guest Log: Copying the results back to the shared directory!
2025-10-20 11:21:01 (9500): Guest Log:  *** Contents of shared directory: ***
2025-10-20 11:21:01 (9500): Guest Log: total 433972
2025-10-20 11:21:01 (9500): Guest Log: -rwxrwxrwx. 1 root root 229659889 Oct 20 06:06 ATLAS.root_0
2025-10-20 11:21:01 (9500): Guest Log: -rwxrwxrwx. 1 root root 212688487 Oct 20 08:21 HITS.pool.root.1
2025-10-20 11:21:01 (9500): Guest Log: -rwxrwxrwx. 1 root root      8547 Oct 20 06:06 init_data.xml
2025-10-20 11:21:01 (9500): Guest Log: -rwxrwxrwx. 1 root root    569681 Oct 20 04:32 input.tar.gz
2025-10-20 11:21:01 (9500): Guest Log: -rwxrwxrwx. 1 root root   1433600 Oct 20 08:21 result.tar.gz
2025-10-20 11:21:01 (9500): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 20 04:32 start_atlas.sh
2025-10-20 11:21:01 (9500): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-20 11:21:01 (9500): VM Completion File Detected.
2025-10-20 11:21:01 (9500): Powering off VM.
2025-10-20 11:21:02 (9500): Successfully stopped VM.
2025-10-20 11:21:02 (9500): Deregistering VM. (boinc_2dd76af58dc68ce2, slot#5)
2025-10-20 11:21:02 (9500): Removing network bandwidth throttle group from VM.
2025-10-20 11:21:02 (9500): Removing VM from VirtualBox.
2025-10-20 11:21:08 (9500): called boinc_finish(0)

</stderr_txt>
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