Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-20 08:27:04 (1398128): vboxwrapper version 26210
2025-10-20 08:27:04 (1398128): BOINC client version: 8.2.5
2025-10-20 08:27:04 (1398128): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-20 08:27:04 (1398128): Successfully copied 'init_data.xml' to the shared directory.
2025-10-20 08:27:05 (1398128): Create VM. (boinc_305e2cd989d77ea4, slot#20)
2025-10-20 08:27:05 (1398128): Setting Memory Size for VM. (4096MB)
2025-10-20 08:27:06 (1398128): Setting CPU Count for VM. (1)
2025-10-20 08:27:06 (1398128): Setting Chipset Options for VM.
2025-10-20 08:27:06 (1398128): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-20 08:27:06 (1398128): Setting Boot Options for VM.
2025-10-20 08:27:07 (1398128): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-20 08:27:07 (1398128): Enabling VM Network Access.
2025-10-20 08:27:07 (1398128): Disabling USB Support for VM.
2025-10-20 08:27:08 (1398128): Disabling COM Port Support for VM.
2025-10-20 08:27:08 (1398128): Disabling LPT Port Support for VM.
2025-10-20 08:27:08 (1398128): Disabling Audio Support for VM.
2025-10-20 08:27:09 (1398128): Disabling Clipboard Support for VM.
2025-10-20 08:27:09 (1398128): Disabling Drag and Drop Support for VM.
2025-10-20 08:27:09 (1398128): Adding storage controller(s) to VM.
2025-10-20 08:27:10 (1398128): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-20 08:27:10 (1398128): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-20 08:27:10 (1398128): forwarding host port 57395 to guest port 80
2025-10-20 08:27:11 (1398128): Enabling remote desktop for VM.
2025-10-20 08:27:11 (1398128): Enabling shared directory for VM.
2025-10-20 08:27:12 (1398128): Starting VM using VBoxManage interface. (boinc_305e2cd989d77ea4, slot#20)
2025-10-20 08:27:13 (1398128): Successfully started VM. (PID = '1400348')
2025-10-20 08:27:13 (1398128): Reporting VM Process ID to BOINC.
2025-10-20 08:27:13 (1398128): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-20 08:27:13 (1398128): Guest Log: CPUID EDX: 0x178bfbff
2025-10-20 08:27:13 (1398128): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-20 08:27:13 (1398128): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-20 08:27:13 (1398128): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-20 08:27:13 (1398128): Detected: Web Application Enabled (http://localhost:57395)
2025-10-20 08:27:13 (1398128): Detected: Remote Desktop Enabled (localhost:46641)
2025-10-20 08:27:13 (1398128): Preference change detected
2025-10-20 08:27:13 (1398128): Setting CPU throttle for VM. (100%)
2025-10-20 08:27:13 (1398128): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-20 08:27:15 (1398128): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-20 08:27:15 (1398128): Guest Log: BIOS: Booting from Hard Disk...
2025-10-20 08:27:18 (1398128): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-20 08:27:18 (1398128): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-20 08:27:18 (1398128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-20 08:27:23 (1398128): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-20 08:27:23 (1398128): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-20 08:27:35 (1398128): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000246 main     Log opened 2025-10-20T06:27:33.577835000Z
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000372 main     OS Product: Linux
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000407 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000435 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000459 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000460 main     Process ID: 1244
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.000461 main     Package type: LINUX_64BITS_GENERIC
2025-10-20 08:27:35 (1398128): Guest Log: 00:00:00.003189 main     5.2.32 r132073 started. Verbose level = 0
2025-10-20 08:27:36 (1398128): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-20 08:27:36 (1398128): Guest Log: [INFO] Mounting shared directory
2025-10-20 08:27:36 (1398128): Guest Log: [INFO] Checking for init_data.xml
2025-10-20 08:27:39 (1398128): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-20 08:27:39 (1398128): Guest Log: [INFO] Detected branch: prod
2025-10-20 08:27:39 (1398128): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-20 08:27:39 (1398128): Guest Log: Copying input files
2025-10-20 08:27:40 (1398128): Guest Log: Copied input files into RunAtlas.
2025-10-20 08:27:40 (1398128): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-20 08:27:50 (1398128): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-20 08:27:50 (1398128): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-20 08:27:50 (1398128): Guest Log: 2.6.3.0 1513 0 31544 151914 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-20 08:27:51 (1398128): Guest Log: copied the webapp to /var/www
2025-10-20 08:27:51 (1398128): Guest Log: core_number=1
2025-10-20 08:27:51 (1398128): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-20 08:27:52 (1398128): Guest Log:  *** Starting ATLAS job. (PandaID=6838772323 taskID=46676269) ***
2025-10-20 10:06:13 (1398128): Status Report: Elapsed Time: '6000.000000'
2025-10-20 10:06:13 (1398128): Status Report: CPU Time: '5901.900000'
2025-10-20 11:45:14 (1398128): Status Report: Elapsed Time: '12000.000000'
2025-10-20 11:45:14 (1398128): Status Report: CPU Time: '11847.640000'
2025-10-20 13:24:14 (1398128): Status Report: Elapsed Time: '18000.000000'
2025-10-20 13:24:14 (1398128): Status Report: CPU Time: '17795.140000'
2025-10-20 15:03:15 (1398128): Status Report: Elapsed Time: '24000.000000'
2025-10-20 15:03:15 (1398128): Status Report: CPU Time: '23742.140000'
2025-10-20 16:42:15 (1398128): Status Report: Elapsed Time: '30000.000000'
2025-10-20 16:42:15 (1398128): Status Report: CPU Time: '29688.920000'
2025-10-20 18:21:15 (1398128): Status Report: Elapsed Time: '36000.000000'
2025-10-20 18:21:15 (1398128): Status Report: CPU Time: '35636.200000'
2025-10-20 20:00:16 (1398128): Status Report: Elapsed Time: '42000.000000'
2025-10-20 20:00:16 (1398128): Status Report: CPU Time: '41583.250000'
2025-10-20 21:39:16 (1398128): Status Report: Elapsed Time: '48000.000000'
2025-10-20 21:39:16 (1398128): Status Report: CPU Time: '47530.210000'
2025-10-20 23:18:17 (1398128): Status Report: Elapsed Time: '54000.000000'
2025-10-20 23:18:17 (1398128): Status Report: CPU Time: '53476.760000'
2025-10-21 00:17:33 (1398128): Guest Log:  *** Job finished ***
2025-10-21 00:17:33 (1398128): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:18,974 | INFO     | [monitor] cgroup control has ended
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:25,223 | INFO     | job.realtimelogging is not enabled
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:26,225 | INFO     | [payload] run_realtimelog thread has finished
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:28,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829553788736)>', '<ExcThread(monitor, started 139828893050624)>']
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:28,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:28,255 | INFO     | [monitor] control thread has ended
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,008 | INFO     | all workflow threads have been joined
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,009 | INFO     | end of generic workflow (traces error code: 0)
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,009 | INFO     | traces error code: 0
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,138 [wrapper] ==== pilot stdout END ====
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,143 [wrapper] ==== wrapper stdout RESUME ====
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,148 [wrapper] pilotpid: 5854
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,153 [wrapper] Pilot exit status: 0
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,198 [wrapper] pandaids: 6838772323
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,230 [wrapper] cleanup supervisor_pilot 18262 5855
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,235 [wrapper] Test setup, not cleaning
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,241 [wrapper] apfmon messages muted
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,246 [wrapper] ==== wrapper stdout END ====
2025-10-21 00:17:33 (1398128): Guest Log: 2025-10-20 22:17:33,251 [wrapper] ==== wrapper stderr END ====
2025-10-21 00:17:33 (1398128): Guest Log:  *** Error codes and diagnostics ***
2025-10-21 00:17:33 (1398128): Guest Log:     "exeErrorCode": 0,
2025-10-21 00:17:33 (1398128): Guest Log:     "exeErrorDiag": "",
2025-10-21 00:17:33 (1398128): Guest Log:     "pilotErrorCode": 0,
2025-10-21 00:17:33 (1398128): Guest Log:     "pilotErrorDiag": "",
2025-10-21 00:17:33 (1398128): Guest Log:  *** Listing of results directory ***
2025-10-21 00:17:33 (1398128): Guest Log: total 209964
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 18:14 pilot3.tar.gz
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 18:16 queuedata.json
2025-10-21 00:17:33 (1398128): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 18:17 runpilot2-wrapper.sh
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 20 06:27 start_atlas.sh
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas    569680 Oct 20 06:27 input.tar.gz
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas     10224 Oct 20 06:27 init_data.xml
2025-10-21 00:17:33 (1398128): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 20 06:27 EVNT.46676267._002506.pool.root.1 -> /data/./ATLAS.root_0
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 20 06:27 pandaJob.out
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas    976369 Oct 20 06:28 agis_schedconf.cvmfs.json
2025-10-21 00:17:33 (1398128): Guest Log: drwx------. 5 atlas atlas      4096 Oct 20 06:28 pilot3
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas 193881686 Oct 20 22:16 HITS.46676269._062384.pool.root.1
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas        95 Oct 20 22:16 pilot_heartbeat.json
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas      1027 Oct 20 22:16 memory_monitor_summary.json
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 20 22:17 agis_ddmendpoints.agis.ALL.json
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas    933112 Oct 20 22:17 log.46676269._062384.job.log.tgz.1
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas      7823 Oct 20 22:17 heartbeat.json
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 20 22:17 pilotlog.txt
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas   7711003 Oct 20 22:17 log.46676269._062384.job.log.1
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas       357 Oct 20 22:17 output.list
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 20 22:17 runtime_log
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas   8663040 Oct 20 22:17 result.tar.gz
2025-10-21 00:17:33 (1398128): Guest Log: -rw-r--r--. 1 atlas atlas      8516 Oct 20 22:17 runtime_log.err
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas       657 Oct 20 22:17 4CdKDmFLtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDChNDmA5voMn.diag
2025-10-21 00:17:33 (1398128): Guest Log: Looking for outputfile HITS.46676269._062384.pool.root.1
2025-10-21 00:17:33 (1398128): Guest Log: HITS file was successfully produced
2025-10-21 00:17:33 (1398128): Guest Log: -rw-------. 1 atlas atlas 193881686 Oct 20 22:16 /home/atlas/RunAtlas/HITS.46676269._062384.pool.root.1
2025-10-21 00:17:34 (1398128): Guest Log: Successfully finished the ATLAS job!
2025-10-21 00:17:34 (1398128): Guest Log: Copying the results back to the shared directory!
2025-10-21 00:17:34 (1398128): Guest Log:  *** Contents of shared directory: ***
2025-10-21 00:17:34 (1398128): Guest Log: total 223212
2025-10-21 00:17:34 (1398128): Guest Log: -rw-r--r--. 1 root root 219299702 Oct 20 06:27 ATLAS.root_0
2025-10-21 00:17:34 (1398128): Guest Log: -rw-r--r--. 1 root root     10224 Oct 20 06:27 init_data.xml
2025-10-21 00:17:34 (1398128): Guest Log: -rw-r--r--. 1 root root    569680 Oct 20 06:27 input.tar.gz
2025-10-21 00:17:34 (1398128): Guest Log: -rw-r--r--. 1 root root   8663040 Oct 20 22:17 result.tar.gz
2025-10-21 00:17:34 (1398128): Guest Log: -rw-r--r--. 1 root root     15120 Oct 20 06:27 start_atlas.sh
2025-10-21 00:17:34 (1398128): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-21 00:17:34 (1398128): VM Completion File Detected.
2025-10-21 00:17:34 (1398128): Powering off VM.
2025-10-21 00:17:35 (1398128): Successfully stopped VM.
2025-10-21 00:17:35 (1398128): Deregistering VM. (boinc_305e2cd989d77ea4, slot#20)
2025-10-21 00:17:35 (1398128): Removing network bandwidth throttle group from VM.
2025-10-21 00:17:36 (1398128): Removing VM from VirtualBox.
2025-10-21 00:17:41 (1398128): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN