Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:31:48 (24416): wrapper (7.7.26015): starting
16:31:48 (24416): wrapper: running run_atlas (--nthreads 8)
[2025-10-19 16:31:48] Arguments: --nthreads 8
[2025-10-19 16:31:48] Threads: 8
[2025-10-19 16:31:48] Checking for CVMFS
[2025-10-19 16:31:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 16:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 16:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 16:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 16:31:48] 2.11.2.0 2919 232 35172 151898 3 1 10494716 20275201 1 130560 0 1019 99.512 6495 41107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-19 16:31:48] CVMFS is ok
[2025-10-19 16:31:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 16:31:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 16:31:48] Further information can be found at the LHC@home message board.
[2025-10-19 16:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 16:31:48] Checking for apptainer binary...
[2025-10-19 16:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 16:31:48] Running /usr/bin/apptainer --version
[2025-10-19 16:31:49] apptainer version 1.3.2-1.el7
[2025-10-19 16:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 16:31:52] c-204-17.aglt2.org
[2025-10-19 16:31:52] apptainer works
[2025-10-19 16:31:52] Set ATHENA_PROC_NUMBER=8
[2025-10-19 16:31:52] Set ATHENA_CORE_NUMBER=8
[2025-10-19 16:31:52] Starting ATLAS job with PandaID=6851799728
[2025-10-19 16:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 18:10:29]  *** The last 200 lines of the pilot log: ***
[2025-10-19 18:10:29]  storage_token=
[2025-10-19 18:10:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6851799728/log.46809188._002910.job.log.tgz.1
[2025-10-19 18:10:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/09/log.46809188._002910.job.log.tgz.1
[2025-10-19 18:10:29]  workdir=None
[2025-10-19 18:10:29] ]
[2025-10-19 18:10:29] 2025-10-19 22:09:46,326 | INFO     | transferring file log.46809188._002910.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6851799728/log.46809188._002910.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-19 18:10:29] 2025-10-19 22:09:46,327 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6851799728/log.46809188._002910.job.log.tgz.1 /tmp/boinchome/slots/0/log.46809188._002910.job
[2025-10-19 18:10:29] 2025-10-19 22:09:46,354 | INFO     | adding to output.list: log.46809188._002910.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/09/log.46809188._002910.job.log.tg
[2025-10-19 18:10:29] 2025-10-19 22:09:46,356 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 18:10:29] 2025-10-19 22:09:46,356 | INFO     | summary of transferred files:
[2025-10-19 18:10:29] 2025-10-19 22:09:46,356 | INFO     |  -- lfn=log.46809188._002910.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 18:10:29] 2025-10-19 22:09:46,356 | INFO     | stage-out finished correctly
[2025-10-19 18:10:29] 2025-10-19 22:09:47,719 | INFO     | time since job start (5855s) is within the limit (172800.0s)
[2025-10-19 18:10:29] 2025-10-19 22:09:48,245 | INFO     | monitor loop #433: job 0:6851799728 is in state 'finished'
[2025-10-19 18:10:29] 2025-10-19 22:09:48,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 18:10:29] 2025-10-19 22:09:48,707 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 18:10:29] 2025-10-19 22:09:49,730 | INFO     | time since job start (5857s) is within the limit (172800.0s)
[2025-10-19 18:10:29] 2025-10-19 22:09:50,749 | INFO     | monitor loop #434: job 0:6851799728 is in state 'finished'
[2025-10-19 18:10:29] 2025-10-19 22:09:50,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 18:10:29] 2025-10-19 22:09:51,505 | INFO     | job 6851799728 has state=finished
[2025-10-19 18:10:29] 2025-10-19 22:09:51,506 | INFO     | preparing for final server update for job 6851799728 in state='finished'
[2025-10-19 18:10:29] 2025-10-19 22:09:51,571 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-19 18:10:29] 2025-10-19 22:09:51,571 | INFO     | this job has now completed (state=finished)
[2025-10-19 18:10:29] 2025-10-19 22:09:51,572 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 18:10:29] 2025-10-19 22:09:51,572 | INFO     | log transfer has been attempted: DONE
[2025-10-19 18:10:29] 2025-10-19 22:09:51,572 | INFO     | job 6851799728 has finished - writing final server update
[2025-10-19 18:10:29] 2025-10-19 22:09:51,572 | INFO     | total number of processed events: 400 (read)
[2025-10-19 18:10:29] 2025-10-19 22:09:51,573 | INFO     | executing command: lscpu
[2025-10-19 18:10:29] 2025-10-19 22:09:51,598 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 18:10:29] 2025-10-19 22:09:51,736 | INFO     | time since job start (5859s) is within the limit (172800.0s)
[2025-10-19 18:10:29] 2025-10-19 22:09:53,252 | INFO     | monitor loop #435: job 0:6851799728 is in state 'finished'
[2025-10-19 18:10:29] 2025-10-19 22:09:53,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 18:10:29] 2025-10-19 22:09:53,741 | INFO     | time since job start (5861s) is within the limit (172800.0s)
[2025-10-19 18:10:29] 2025-10-19 22:09:55,746 | INFO     | time since job start (5863s) is within the limit (172800.0s)
[2025-10-19 18:10:29] 2025-10-19 22:09:55,755 | INFO     | monitor loop #436: job 0:6851799728 is in state 'finished'
[2025-10-19 18:10:29] 2025-10-19 22:09:55,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,213 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-19 18:10:29] 2025-10-19 22:09:57,216 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-19 18:10:29] 2025-10-19 22:09:57,218 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6851799728/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,219 | INFO     | extracted standard info from prmon json
[2025-10-19 18:10:29] 2025-10-19 22:09:57,220 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 18:10:29] 2025-10-19 22:09:57,220 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 18:10:29] 2025-10-19 22:09:57,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 18:10:29] 2025-10-19 22:09:57,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 18:10:29] 2025-10-19 22:09:57,224 | INFO     | fitting pss+swap vs Time
[2025-10-19 18:10:29] 2025-10-19 22:09:57,224 | INFO     | sum of square deviations: 218571540.0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,225 | INFO     | sum of deviations: -13538427717.999998
[2025-10-19 18:10:29] 2025-10-19 22:09:57,225 | INFO     | mean x: 1760908955.0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,225 | INFO     | mean y: 2612555.4606741574
[2025-10-19 18:10:29] 2025-10-19 22:09:57,225 | INFO     | -- intersect: 109074171484.15932
[2025-10-19 18:10:29] 2025-10-19 22:09:57,225 | INFO     | intersect: 109074171484.15932
[2025-10-19 18:10:29] 2025-10-19 22:09:57,226 | INFO     | chi2: 0.10808012791125403
[2025-10-19 18:10:29] 2025-10-19 22:09:57,226 | INFO     | -- intersect: 109074171484.15932
[2025-10-19 18:10:29] 2025-10-19 22:09:57,226 | INFO     | current memory leak: -61.94 B/s (using 89 data points, chi2=0.11)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,226 | INFO     | could have reported an average CPU frequency of 1948 MHz (7 samples)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,227 | INFO     | ..............................
[2025-10-19 18:10:29] 2025-10-19 22:09:57,227 | INFO     | . Timing measurements:
[2025-10-19 18:10:29] 2025-10-19 22:09:57,227 | INFO     | . get job = 0 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,227 | INFO     | . initial setup = 2 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,227 | INFO     | . payload setup = 9 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,227 | INFO     | . stage-in = 0 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,228 | INFO     | . payload execution = 5821 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,228 | INFO     | . stage-out = 1 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,228 | INFO     | . log creation = 0 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,228 | INFO     | ..............................
[2025-10-19 18:10:29] 2025-10-19 22:09:57,321 | INFO     | 
[2025-10-19 18:10:29] 2025-10-19 22:09:57,321 | INFO     | job summary report
[2025-10-19 18:10:29] 2025-10-19 22:09:57,322 | INFO     | --------------------------------------------------
[2025-10-19 18:10:29] 2025-10-19 22:09:57,322 | INFO     | PanDA job id: 6851799728
[2025-10-19 18:10:29] 2025-10-19 22:09:57,322 | INFO     | task id: 46809188
[2025-10-19 18:10:29] 2025-10-19 22:09:57,322 | INFO     | errors: (none)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 18:10:29] 2025-10-19 22:09:57,322 | INFO     | pilot state: finished 
[2025-10-19 18:10:29] 2025-10-19 22:09:57,323 | INFO     | transexitcode: 0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,323 | INFO     | exeerrorcode: 0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,323 | INFO     | exeerrordiag: 
[2025-10-19 18:10:29] 2025-10-19 22:09:57,323 | INFO     | exitcode: 0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,323 | INFO     | exitmsg: OK
[2025-10-19 18:10:29] 2025-10-19 22:09:57,323 | INFO     | cpuconsumptiontime: 42645 s
[2025-10-19 18:10:29] 2025-10-19 22:09:57,324 | INFO     | nevents: 400
[2025-10-19 18:10:29] 2025-10-19 22:09:57,324 | INFO     | neventsw: 0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,324 | INFO     | pid: 2301
[2025-10-19 18:10:29] 2025-10-19 22:09:57,324 | INFO     | pgrp: 2301
[2025-10-19 18:10:29] 2025-10-19 22:09:57,324 | INFO     | corecount: 8
[2025-10-19 18:10:29] 2025-10-19 22:09:57,324 | INFO     | event service: False
[2025-10-19 18:10:29] 2025-10-19 22:09:57,325 | INFO     | sizes: {0: 2348837, 1: 2348837, 7: 2349127, 12: 2349155, 5835: 2375958, 5837: 2384956, 5839: 2385140, 5847: 2385334}
[2025-10-19 18:10:29] 2025-10-19 22:09:57,325 | INFO     | --------------------------------------------------
[2025-10-19 18:10:29] 2025-10-19 22:09:57,325 | INFO     | 
[2025-10-19 18:10:29] 2025-10-19 22:09:57,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-19 18:10:29] 2025-10-19 22:09:57,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,357 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 18:10:29] 2025-10-19 22:09:57,359 | INFO     | job 6851799728 has completed (purged errors)
[2025-10-19 18:10:29] 2025-10-19 22:09:57,360 | INFO     | overall cleanup function is called
[2025-10-19 18:10:29] 2025-10-19 22:09:58,368 | INFO     | --- collectZombieJob: --- 10, [2301]
[2025-10-19 18:10:29] 2025-10-19 22:09:58,368 | INFO     | zombie collector waiting for pid 2301
[2025-10-19 18:10:29] 2025-10-19 22:09:58,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 18:10:29] 2025-10-19 22:09:58,369 | INFO     | collected zombie processes
[2025-10-19 18:10:29] 2025-10-19 22:09:58,369 | INFO     | will attempt to kill all subprocesses of pid=2301
[2025-10-19 18:10:29] 2025-10-19 22:09:58,455 | INFO     | process IDs to be killed: [2301] (in reverse order)
[2025-10-19 18:10:29] 2025-10-19 22:09:58,511 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 18:10:29] 2025-10-19 22:09:58,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 18:10:29] 2025-10-19 22:09:58,516 | INFO     | did not find any defunct processes belonging to 2301
[2025-10-19 18:10:29] 2025-10-19 22:09:58,520 | INFO     | did not find any defunct processes belonging to 2301
[2025-10-19 18:10:29] 2025-10-19 22:09:58,520 | INFO     | ready for new job
[2025-10-19 18:10:29] 2025-10-19 22:09:58,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 18:10:29] 2025-10-19 22:09:58,522 | INFO     | ***************************************
[2025-10-19 18:10:29] 2025-10-19 22:09:58,522 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 18:10:29] 2025-10-19 22:09:58,523 | INFO     | ***************************************
[2025-10-19 18:10:29] 2025-10-19 22:09:58,523 | INFO     | 
[2025-10-19 18:10:29] 2025-10-19 22:09:58,523 | INFO     | architecture information:
[2025-10-19 18:10:29] 2025-10-19 22:09:58,524 | INFO     | executing command: cat /etc/os-release
[2025-10-19 18:10:29] 2025-10-19 22:09:58,541 | INFO     | cat /etc/os-release:
[2025-10-19 18:10:29] NAME="CentOS Linux"
[2025-10-19 18:10:29] VERSION="7 (Core)"
[2025-10-19 18:10:29] ID="centos"
[2025-10-19 18:10:29] ID_LIKE="rhel fedora"
[2025-10-19 18:10:29] VERSION_ID="7"
[2025-10-19 18:10:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 18:10:29] ANSI_COLOR="0;31"
[2025-10-19 18:10:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 18:10:29] HOME_URL="https://www.centos.org/"
[2025-10-19 18:10:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 18:10:29] 
[2025-10-19 18:10:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 18:10:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 18:10:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 18:10:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 18:10:29] 
[2025-10-19 18:10:29] 2025-10-19 22:09:58,541 | INFO     | ***************************************
[2025-10-19 18:10:29] 2025-10-19 22:09:59,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-19 18:10:29] 2025-10-19 22:09:59,063 | INFO     | sufficient remaining disk space (18653118464 B)
[2025-10-19 18:10:29] 2025-10-19 22:09:59,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 18:10:29] 2025-10-19 22:09:59,064 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 18:10:29] 2025-10-19 22:09:59,064 | INFO     | update_server=False
[2025-10-19 18:10:29] 2025-10-19 22:09:59,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 18:10:29] 2025-10-19 22:09:59,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 18:10:29] 2025-10-19 22:09:59,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 18:10:29] 2025-10-19 22:09:59,264 | INFO     | aborting loop
[2025-10-19 18:10:29] 2025-10-19 22:09:59,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 18:10:29] 2025-10-19 22:09:59,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 18:10:29] 2025-10-19 22:09:59,518 | INFO     | all data control threads have been joined
[2025-10-19 18:10:29] 2025-10-19 22:09:59,632 | INFO     | all job control threads have been joined
[2025-10-19 18:10:29] 2025-10-19 22:09:59,796 | INFO     | all payload control threads have been joined
[2025-10-19 18:10:29] 2025-10-19 22:10:00,069 | INFO     | [job] queue monitor thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,070 | INFO     | [job] retrieve thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,156 | INFO     | [payload] failed_post thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,270 | INFO     | [job] job monitor thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,326 | INFO     | [data] copytool_in thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,333 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,343 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,519 | INFO     | [data] control thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,638 | INFO     | [job] control thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,720 | INFO     | [payload] validate_post thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,724 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:00,801 | INFO     | [payload] control thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:01,353 | INFO     | [job] validate thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:01,469 | INFO     | [data] copytool_out thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:03,308 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:09,643 | INFO     | job.realtimelogging is not enabled
[2025-10-19 18:10:29] 2025-10-19 22:10:10,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 18:10:29] 2025-10-19 22:10:21,310 | INFO     | [monitor] cgroup control has ended
[2025-10-19 18:10:29] 2025-10-19 22:10:23,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894754834240)>', '<ExcThread(monitor, started 139894148011776)>']
[2025-10-19 18:10:29] 2025-10-19 22:10:28,266 | INFO     | all workflow threads have been joined
[2025-10-19 18:10:29] 2025-10-19 22:10:28,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 18:10:29] 2025-10-19 22:10:28,267 | INFO     | traces error code: 0
[2025-10-19 18:10:29] 2025-10-19 22:10:28,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 18:10:29] 2025-10-19 22:10:28,972 | INFO     | PID=28249 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-19 18:10:29] 2025-10-19 22:10:28,973 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 18:10:29] 2025-10-19 22:10:28,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 18:10:29] 2025-10-19 22:10:28,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 18:10:29] 2025-10-19 22:10:28,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 18:10:29] 2025-10-19 22:10:28,973 | INFO     | [monitor] control thread has ended
[2025-10-19 18:10:29] 2025-10-19 22:10:29,077 [wrapper] ==== pilot stdout END ====
[2025-10-19 18:10:29] 2025-10-19 22:10:29,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 18:10:29] 2025-10-19 22:10:29,086 [wrapper] pilotpid: 28249
[2025-10-19 18:10:29] 2025-10-19 22:10:29,090 [wrapper] Pilot exit status: 0
[2025-10-19 18:10:29] 2025-10-19 22:10:29,120 [wrapper] pandaids: 6851799728
[2025-10-19 18:10:29] 2025-10-19 22:10:29,167 [wrapper] cleanup supervisor_pilot  2952 28250
[2025-10-19 18:10:29] 2025-10-19 22:10:29,171 [wrapper] Test setup, not cleaning
[2025-10-19 18:10:29] 2025-10-19 22:10:29,176 [wrapper] apfmon messages muted
[2025-10-19 18:10:29] 2025-10-19 22:10:29,181 [wrapper] ==== wrapper stdout END ====
[2025-10-19 18:10:29] 2025-10-19 22:10:29,185 [wrapper] ==== wrapper stderr END ====
[2025-10-19 18:10:29]  *** Error codes and diagnostics ***
[2025-10-19 18:10:29]     "exeErrorCode": 0,
[2025-10-19 18:10:29]     "exeErrorDiag": "",
[2025-10-19 18:10:29]     "pilotErrorCode": 0,
[2025-10-19 18:10:29]     "pilotErrorDiag": "",
[2025-10-19 18:10:29]  *** Listing of results directory ***
[2025-10-19 18:10:29] total 337168
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 19 15:25 pilot3.tar.gz
[2025-10-19 18:10:29] -rwx------ 1 boincer umatlas     36292 Oct 19 16:30 runpilot2-wrapper.sh
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 19 16:30 queuedata.json
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas       100 Oct 19 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 18:10:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 19 16:31 run_atlas
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas       105 Oct 19 16:31 job.xml
[2025-10-19 18:10:29] -rw-r--r-- 2 boincer umatlas 191256523 Oct 19 16:31 EVNT.46809186._000110.pool.root.1
[2025-10-19 18:10:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 16:31 start_atlas.sh
[2025-10-19 18:10:29] drwxrwx--x 2 boincer umatlas      4096 Oct 19 16:31 shared
[2025-10-19 18:10:29] -rw-r--r-- 2 boincer umatlas    569665 Oct 19 16:31 input.tar.gz
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas         0 Oct 19 16:31 boinc_lockfile
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas      2491 Oct 19 16:31 pandaJob.out
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas    976742 Oct 19 16:32 agis_schedconf.cvmfs.json
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas   1560740 Oct 19 16:32 agis_ddmendpoints.agis.ALL.json
[2025-10-19 18:10:29] drwx------ 5 boincer umatlas      4096 Oct 19 16:32 pilot3
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas      5909 Oct 19 18:00 init_data.xml
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas 147726811 Oct 19 18:09 HITS.46809188._002910.pool.root.1
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas       530 Oct 19 18:09 boinc_task_state.xml
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas        95 Oct 19 18:09 pilot_heartbeat.json
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas      1046 Oct 19 18:09 memory_monitor_summary.json
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas    355998 Oct 19 18:09 log.46809188._002910.job.log.tgz.1
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas      7841 Oct 19 18:09 heartbeat.json
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 19 18:10 boinc_mmap_file
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas        27 Oct 19 18:10 wrapper_checkpoint.txt
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas       745 Oct 19 18:10 pilotlog.txt
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas    833233 Oct 19 18:10 log.46809188._002910.job.log.1
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas       357 Oct 19 18:10 output.list
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas       620 Oct 19 18:10 runtime_log
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas   1208320 Oct 19 18:10 result.tar.gz
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas       658 Oct 19 18:10 ynfNDmPEpU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0gyNDmsOTxtn.diag
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas      8703 Oct 19 18:10 runtime_log.err
[2025-10-19 18:10:29] -rw-r--r-- 1 boincer umatlas     22145 Oct 19 18:10 stderr.txt
[2025-10-19 18:10:29] HITS file was successfully produced:
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas 147726811 Oct 19 18:09 shared/HITS.pool.root.1
[2025-10-19 18:10:29]  *** Contents of shared directory: ***
[2025-10-19 18:10:29] total 332804
[2025-10-19 18:10:29] -rw-r--r-- 2 boincer umatlas 191256523 Oct 19 16:31 ATLAS.root_0
[2025-10-19 18:10:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 16:31 start_atlas.sh
[2025-10-19 18:10:29] -rw-r--r-- 2 boincer umatlas    569665 Oct 19 16:31 input.tar.gz
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas 147726811 Oct 19 18:09 HITS.pool.root.1
[2025-10-19 18:10:29] -rw------- 1 boincer umatlas   1208320 Oct 19 18:10 result.tar.gz
18:10:30 (24416): run_atlas exited; CPU time 42655.736028
18:10:30 (24416): called boinc_finish(0)

</stderr_txt>
]]>

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