Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:36:50 (31317): wrapper (7.7.26015): starting
15:36:50 (31317): wrapper: running run_atlas (--nthreads 12)
[2025-10-19 15:36:50] Arguments: --nthreads 12
[2025-10-19 15:36:50] Threads: 12
[2025-10-19 15:36:50] Checking for CVMFS
[2025-10-19 15:36:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 15:36:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 15:36:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 15:36:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 15:36:50] 2.11.2.0 30551 63331 85772 151897 0 1 20219756 20275201 1 130560 0 37185995 99.963 2756123 40494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-19 15:36:50] CVMFS is ok
[2025-10-19 15:36:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 15:36:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 15:36:50] Further information can be found at the LHC@home message board.
[2025-10-19 15:36:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 15:36:50] Checking for apptainer binary...
[2025-10-19 15:36:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 15:36:50] Running /usr/bin/apptainer --version
[2025-10-19 15:36:50] apptainer version 1.3.2-1.el7
[2025-10-19 15:36:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 15:36:52] c-205-16.aglt2.org
[2025-10-19 15:36:52] apptainer works
[2025-10-19 15:36:52] Set ATHENA_PROC_NUMBER=12
[2025-10-19 15:36:52] Set ATHENA_CORE_NUMBER=12
[2025-10-19 15:36:52] Starting ATLAS job with PandaID=6846955784
[2025-10-19 15:36:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 16:55:21]  *** The last 200 lines of the pilot log: ***
[2025-10-19 16:55:21]  scope=mc23_13p6TeV
[2025-10-19 16:55:21]  status=None
[2025-10-19 16:55:21]  status_code=0
[2025-10-19 16:55:21]  storage_token=
[2025-10-19 16:55:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6846955784/log.46776533._009423.job.log.tgz.1
[2025-10-19 16:55:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/70/log.46776533._009423.job.log.tgz.1
[2025-10-19 16:55:21]  workdir=None
[2025-10-19 16:55:21] ]
[2025-10-19 16:55:21] 2025-10-19 20:54:47,308 | INFO     | transferring file log.46776533._009423.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6846955784/log.46776533._009423.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-19 16:55:21] 2025-10-19 20:54:47,308 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6846955784/log.46776533._009423.job.log.tgz.1 /tmp/boinchome/slots/0/log.46776533._009423.job
[2025-10-19 16:55:21] 2025-10-19 20:54:47,329 | INFO     | adding to output.list: log.46776533._009423.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/70/log.46776533._009423.job.log.tg
[2025-10-19 16:55:21] 2025-10-19 20:54:47,330 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 16:55:21] 2025-10-19 20:54:47,330 | INFO     | summary of transferred files:
[2025-10-19 16:55:21] 2025-10-19 20:54:47,330 | INFO     |  -- lfn=log.46776533._009423.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 16:55:21] 2025-10-19 20:54:47,330 | INFO     | stage-out finished correctly
[2025-10-19 16:55:21] 2025-10-19 20:54:47,628 | INFO     | time since job start (4660s) is within the limit (172800.0s)
[2025-10-19 16:55:21] 2025-10-19 20:54:48,582 | INFO     | monitor loop #348: job 0:6846955784 is in state 'finished'
[2025-10-19 16:55:21] 2025-10-19 20:54:48,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 16:55:21] 2025-10-19 20:54:48,853 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 16:55:21] 2025-10-19 20:54:49,633 | INFO     | time since job start (4662s) is within the limit (172800.0s)
[2025-10-19 16:55:21] 2025-10-19 20:54:50,751 | INFO     | PID=2746 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-19 16:55:21] 2025-10-19 20:54:51,090 | INFO     | job 6846955784 has state=finished
[2025-10-19 16:55:21] 2025-10-19 20:54:51,090 | INFO     | preparing for final server update for job 6846955784 in state='finished'
[2025-10-19 16:55:21] 2025-10-19 20:54:51,091 | INFO     | this job has now completed (state=finished)
[2025-10-19 16:55:21] 2025-10-19 20:54:51,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 16:55:21] 2025-10-19 20:54:51,091 | INFO     | log transfer has been attempted: DONE
[2025-10-19 16:55:21] 2025-10-19 20:54:51,091 | INFO     | job 6846955784 has finished - writing final server update
[2025-10-19 16:55:21] 2025-10-19 20:54:51,091 | INFO     | total number of processed events: 400 (read)
[2025-10-19 16:55:21] 2025-10-19 20:54:51,094 | INFO     | executing command: lscpu
[2025-10-19 16:55:21] 2025-10-19 20:54:51,094 | INFO     | monitor loop #349: job 0:6846955784 is in state 'finished'
[2025-10-19 16:55:21] 2025-10-19 20:54:51,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 16:55:21] 2025-10-19 20:54:51,122 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 16:55:21] 2025-10-19 20:54:51,752 | INFO     | time since job start (4664s) is within the limit (172800.0s)
[2025-10-19 16:55:21] 2025-10-19 20:54:53,601 | INFO     | monitor loop #350: job 0:6846955784 is in state 'finished'
[2025-10-19 16:55:21] 2025-10-19 20:54:53,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 16:55:21] 2025-10-19 20:54:53,757 | INFO     | time since job start (4666s) is within the limit (172800.0s)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,762 | INFO     | time since job start (4668s) is within the limit (172800.0s)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,808 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-19 16:55:21] 2025-10-19 20:54:55,812 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-19 16:55:21] 2025-10-19 20:54:55,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6846955784/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,814 | INFO     | extracted standard info from prmon json
[2025-10-19 16:55:21] 2025-10-19 20:54:55,815 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 16:55:21] 2025-10-19 20:54:55,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 16:55:21] 2025-10-19 20:54:55,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 16:55:21] 2025-10-19 20:54:55,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 16:55:21] 2025-10-19 20:54:55,817 | INFO     | fitting pss+swap vs Time
[2025-10-19 16:55:21] 2025-10-19 20:54:55,817 | INFO     | sum of square deviations: 101843770.0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,817 | INFO     | sum of deviations: -9449855504.0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,817 | INFO     | mean x: 1760905036.0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,817 | INFO     | mean y: 2821283.347826087
[2025-10-19 16:55:21] 2025-10-19 20:54:55,818 | INFO     | -- intersect: 163393258876.7904
[2025-10-19 16:55:21] 2025-10-19 20:54:55,818 | INFO     | intersect: 163393258876.7904
[2025-10-19 16:55:21] 2025-10-19 20:54:55,818 | INFO     | chi2: 0.05638463840386115
[2025-10-19 16:55:21] 2025-10-19 20:54:55,818 | INFO     | -- intersect: 163393258876.7904
[2025-10-19 16:55:21] 2025-10-19 20:54:55,818 | INFO     | current memory leak: -92.79 B/s (using 69 data points, chi2=0.06)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,818 | INFO     | could have reported an average CPU frequency of 2028 MHz (6 samples)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | ..............................
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . Timing measurements:
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . get job = 0 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . initial setup = 2 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . payload setup = 7 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . stage-in = 0 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . payload execution = 4630 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . stage-out = 0 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | . log creation = 0 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,819 | INFO     | ..............................
[2025-10-19 16:55:21] 2025-10-19 20:54:55,901 | INFO     | 
[2025-10-19 16:55:21] 2025-10-19 20:54:55,901 | INFO     | job summary report
[2025-10-19 16:55:21] 2025-10-19 20:54:55,901 | INFO     | --------------------------------------------------
[2025-10-19 16:55:21] 2025-10-19 20:54:55,901 | INFO     | PanDA job id: 6846955784
[2025-10-19 16:55:21] 2025-10-19 20:54:55,902 | INFO     | task id: 46776533
[2025-10-19 16:55:21] 2025-10-19 20:54:55,902 | INFO     | errors: (none)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 16:55:21] 2025-10-19 20:54:55,902 | INFO     | pilot state: finished 
[2025-10-19 16:55:21] 2025-10-19 20:54:55,902 | INFO     | transexitcode: 0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,902 | INFO     | exeerrorcode: 0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,903 | INFO     | exeerrordiag: 
[2025-10-19 16:55:21] 2025-10-19 20:54:55,903 | INFO     | exitcode: 0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,903 | INFO     | exitmsg: OK
[2025-10-19 16:55:21] 2025-10-19 20:54:55,903 | INFO     | cpuconsumptiontime: 50928 s
[2025-10-19 16:55:21] 2025-10-19 20:54:55,903 | INFO     | nevents: 400
[2025-10-19 16:55:21] 2025-10-19 20:54:55,903 | INFO     | neventsw: 0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,904 | INFO     | pid: 9141
[2025-10-19 16:55:21] 2025-10-19 20:54:55,904 | INFO     | pgrp: 9141
[2025-10-19 16:55:21] 2025-10-19 20:54:55,904 | INFO     | corecount: 12
[2025-10-19 16:55:21] 2025-10-19 20:54:55,904 | INFO     | event service: False
[2025-10-19 16:55:21] 2025-10-19 20:54:55,904 | INFO     | sizes: {0: 2348755, 1: 2348954, 6: 2349216, 11: 2349244, 4641: 2375377, 4644: 2384375, 4645: 2384559, 4652: 2384753}
[2025-10-19 16:55:21] 2025-10-19 20:54:55,904 | INFO     | --------------------------------------------------
[2025-10-19 16:55:21] 2025-10-19 20:54:55,905 | INFO     | 
[2025-10-19 16:55:21] 2025-10-19 20:54:55,905 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-19 16:55:21] 2025-10-19 20:54:55,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,930 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,932 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,933 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 16:55:21] 2025-10-19 20:54:55,933 | INFO     | job 6846955784 has completed (purged errors)
[2025-10-19 16:55:21] 2025-10-19 20:54:55,933 | INFO     | overall cleanup function is called
[2025-10-19 16:55:21] 2025-10-19 20:54:56,941 | INFO     | --- collectZombieJob: --- 10, [9141]
[2025-10-19 16:55:21] 2025-10-19 20:54:56,941 | INFO     | zombie collector waiting for pid 9141
[2025-10-19 16:55:21] 2025-10-19 20:54:56,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 16:55:21] 2025-10-19 20:54:56,942 | INFO     | collected zombie processes
[2025-10-19 16:55:21] 2025-10-19 20:54:56,942 | INFO     | will attempt to kill all subprocesses of pid=9141
[2025-10-19 16:55:21] 2025-10-19 20:54:57,034 | INFO     | process IDs to be killed: [9141] (in reverse order)
[2025-10-19 16:55:21] 2025-10-19 20:54:57,174 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 16:55:21] 2025-10-19 20:54:57,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 16:55:21] 2025-10-19 20:54:57,178 | INFO     | did not find any defunct processes belonging to 9141
[2025-10-19 16:55:21] 2025-10-19 20:54:57,182 | INFO     | did not find any defunct processes belonging to 9141
[2025-10-19 16:55:21] 2025-10-19 20:54:57,182 | INFO     | ready for new job
[2025-10-19 16:55:21] 2025-10-19 20:54:57,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 16:55:21] 2025-10-19 20:54:57,184 | INFO     | ***************************************
[2025-10-19 16:55:21] 2025-10-19 20:54:57,184 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 16:55:21] 2025-10-19 20:54:57,184 | INFO     | ***************************************
[2025-10-19 16:55:21] 2025-10-19 20:54:57,184 | INFO     | 
[2025-10-19 16:55:21] 2025-10-19 20:54:57,184 | INFO     | architecture information:
[2025-10-19 16:55:21] 2025-10-19 20:54:57,185 | INFO     | executing command: cat /etc/os-release
[2025-10-19 16:55:21] 2025-10-19 20:54:57,199 | INFO     | cat /etc/os-release:
[2025-10-19 16:55:21] NAME="CentOS Linux"
[2025-10-19 16:55:21] VERSION="7 (Core)"
[2025-10-19 16:55:21] ID="centos"
[2025-10-19 16:55:21] ID_LIKE="rhel fedora"
[2025-10-19 16:55:21] VERSION_ID="7"
[2025-10-19 16:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 16:55:21] ANSI_COLOR="0;31"
[2025-10-19 16:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 16:55:21] HOME_URL="https://www.centos.org/"
[2025-10-19 16:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 16:55:21] 
[2025-10-19 16:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 16:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 16:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 16:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 16:55:21] 
[2025-10-19 16:55:21] 2025-10-19 20:54:57,199 | INFO     | ***************************************
[2025-10-19 16:55:21] 2025-10-19 20:54:57,702 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-19 16:55:21] 2025-10-19 20:54:57,719 | INFO     | sufficient remaining disk space (29475471360 B)
[2025-10-19 16:55:21] 2025-10-19 20:54:57,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 16:55:21] 2025-10-19 20:54:57,719 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 16:55:21] 2025-10-19 20:54:57,719 | INFO     | update_server=False
[2025-10-19 16:55:21] 2025-10-19 20:54:57,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 16:55:21] 2025-10-19 20:54:57,720 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-19 16:55:21] 2025-10-19 20:54:57,720 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 16:55:21] 2025-10-19 20:54:57,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 16:55:21] 2025-10-19 20:54:57,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 16:55:21] 2025-10-19 20:54:57,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 16:55:21] 2025-10-19 20:54:57,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 16:55:21] 2025-10-19 20:54:57,721 | INFO     | aborting loop
[2025-10-19 16:55:21] 2025-10-19 20:54:57,902 | INFO     | all job control threads have been joined
[2025-10-19 16:55:21] 2025-10-19 20:54:57,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 16:55:21] 2025-10-19 20:54:58,145 | INFO     | all payload control threads have been joined
[2025-10-19 16:55:21] 2025-10-19 20:54:58,655 | INFO     | all data control threads have been joined
[2025-10-19 16:55:21] 2025-10-19 20:54:58,725 | INFO     | [job] retrieve thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:58,726 | INFO     | [job] job monitor thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:58,726 | INFO     | [job] queue monitor thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:58,771 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:58,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:58,888 | INFO     | [payload] validate_post thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:58,908 | INFO     | [job] control thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,058 | INFO     | [data] copytool_in thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,151 | INFO     | [payload] control thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,427 | INFO     | [payload] failed_post thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 16:55:21] 2025-10-19 20:54:59,503 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,582 | INFO     | [job] validate thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,660 | INFO     | [data] control thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:54:59,938 | INFO     | [data] copytool_out thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:55:00,016 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:55:03,450 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 16:55:21] 2025-10-19 20:55:14,719 | INFO     | [monitor] cgroup control has ended
[2025-10-19 16:55:21] 2025-10-19 20:55:16,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676532193088)>', '<ExcThread(monitor, started 139675960342272)>']
[2025-10-19 16:55:21] 2025-10-19 20:55:16,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 16:55:21] 2025-10-19 20:55:16,806 | INFO     | [monitor] control thread has ended
[2025-10-19 16:55:21] 2025-10-19 20:55:21,323 | INFO     | all workflow threads have been joined
[2025-10-19 16:55:21] 2025-10-19 20:55:21,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 16:55:21] 2025-10-19 20:55:21,323 | INFO     | traces error code: 0
[2025-10-19 16:55:21] 2025-10-19 20:55:21,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 16:55:21] 2025-10-19 20:55:21,414 [wrapper] ==== pilot stdout END ====
[2025-10-19 16:55:21] 2025-10-19 20:55:21,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 16:55:21] 2025-10-19 20:55:21,422 [wrapper] pilotpid: 2746
[2025-10-19 16:55:21] 2025-10-19 20:55:21,426 [wrapper] Pilot exit status: 0
[2025-10-19 16:55:21] 2025-10-19 20:55:21,441 [wrapper] pandaids: 6846955784
[2025-10-19 16:55:21] 2025-10-19 20:55:21,481 [wrapper] cleanup supervisor_pilot 12381 2747
[2025-10-19 16:55:21] 2025-10-19 20:55:21,485 [wrapper] Test setup, not cleaning
[2025-10-19 16:55:21] 2025-10-19 20:55:21,489 [wrapper] apfmon messages muted
[2025-10-19 16:55:21] 2025-10-19 20:55:21,493 [wrapper] ==== wrapper stdout END ====
[2025-10-19 16:55:21] 2025-10-19 20:55:21,498 [wrapper] ==== wrapper stderr END ====
[2025-10-19 16:55:21]  *** Error codes and diagnostics ***
[2025-10-19 16:55:21]     "exeErrorCode": 0,
[2025-10-19 16:55:21]     "exeErrorDiag": "",
[2025-10-19 16:55:21]     "pilotErrorCode": 0,
[2025-10-19 16:55:21]     "pilotErrorDiag": "",
[2025-10-19 16:55:21]  *** Listing of results directory ***
[2025-10-19 16:55:21] total 430640
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas    557409 Oct 15 23:35 pilot3.tar.gz
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas      5112 Oct 16 00:03 queuedata.json
[2025-10-19 16:55:21] -rwx------ 1 boincer umatlas     36292 Oct 16 00:04 runpilot2-wrapper.sh
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas       100 Oct 19 15:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 16:55:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct 19 15:36 run_atlas
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas       105 Oct 19 15:36 job.xml
[2025-10-19 16:55:21] -rw-r--r-- 2 boincer umatlas 227495486 Oct 19 15:36 EVNT.46776529._000368.pool.root.1
[2025-10-19 16:55:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 15:36 start_atlas.sh
[2025-10-19 16:55:21] drwxrwx--x 2 boincer umatlas      4096 Oct 19 15:36 shared
[2025-10-19 16:55:21] -rw-r--r-- 2 boincer umatlas    569685 Oct 19 15:36 input.tar.gz
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas         0 Oct 19 15:36 boinc_lockfile
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas      2558 Oct 19 15:36 pandaJob.out
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas    976750 Oct 19 15:37 agis_schedconf.cvmfs.json
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas   1560740 Oct 19 15:37 agis_ddmendpoints.agis.ALL.json
[2025-10-19 16:55:21] drwx------ 5 boincer umatlas      4096 Oct 19 15:37 pilot3
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas      5952 Oct 19 16:48 init_data.xml
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas        95 Oct 19 16:54 pilot_heartbeat.json
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas 207483058 Oct 19 16:54 HITS.46776533._009423.pool.root.1
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas       529 Oct 19 16:54 boinc_task_state.xml
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas      1045 Oct 19 16:54 memory_monitor_summary.json
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas    375994 Oct 19 16:54 log.46776533._009423.job.log.tgz.1
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas      8192 Oct 19 16:54 boinc_mmap_file
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas        27 Oct 19 16:54 wrapper_checkpoint.txt
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas      7852 Oct 19 16:54 heartbeat.json
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas      4552 Oct 19 16:55 pilotlog.txt
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas    673996 Oct 19 16:55 log.46776533._009423.job.log.1
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas       357 Oct 19 16:55 output.list
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas       620 Oct 19 16:55 runtime_log
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas   1064960 Oct 19 16:55 result.tar.gz
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas      8705 Oct 19 16:55 runtime_log.err
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas       659 Oct 19 16:55 1XxNDmsOUT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmneXMDmlpDqen.diag
[2025-10-19 16:55:21] -rw-r--r-- 1 boincer umatlas     21947 Oct 19 16:55 stderr.txt
[2025-10-19 16:55:21] HITS file was successfully produced:
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas 207483058 Oct 19 16:54 shared/HITS.pool.root.1
[2025-10-19 16:55:21]  *** Contents of shared directory: ***
[2025-10-19 16:55:21] total 426408
[2025-10-19 16:55:21] -rw-r--r-- 2 boincer umatlas 227495486 Oct 19 15:36 ATLAS.root_0
[2025-10-19 16:55:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 15:36 start_atlas.sh
[2025-10-19 16:55:21] -rw-r--r-- 2 boincer umatlas    569685 Oct 19 15:36 input.tar.gz
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas 207483058 Oct 19 16:54 HITS.pool.root.1
[2025-10-19 16:55:21] -rw------- 1 boincer umatlas   1064960 Oct 19 16:55 result.tar.gz
16:55:23 (31317): run_atlas exited; CPU time 50903.418638
16:55:23 (31317): called boinc_finish(0)

</stderr_txt>
]]>

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