Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-19 19:59:11 (15976): vboxwrapper version 26210
2025-10-19 19:59:11 (15976): BOINC client version: 8.0.2
2025-10-19 19:59:12 (15976): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-19 19:59:12 (15976): Successfully copied 'init_data.xml' to the shared directory.
2025-10-19 19:59:12 (15976): Create VM. (boinc_02a3870be56d0275, slot#4)
2025-10-19 19:59:13 (15976): Setting Memory Size for VM. (4800MB)
2025-10-19 19:59:13 (15976): Setting CPU Count for VM. (8)
2025-10-19 19:59:13 (15976): Setting Chipset Options for VM.
2025-10-19 19:59:13 (15976): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-19 19:59:14 (15976): Setting Boot Options for VM.
2025-10-19 19:59:14 (15976): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-19 19:59:14 (15976): Enabling VM Network Access.
2025-10-19 19:59:15 (15976): Disabling USB Support for VM.
2025-10-19 19:59:15 (15976): Disabling COM Port Support for VM.
2025-10-19 19:59:15 (15976): Disabling LPT Port Support for VM.
2025-10-19 19:59:15 (15976): Disabling Audio Support for VM.
2025-10-19 19:59:16 (15976): Disabling Clipboard Support for VM.
2025-10-19 19:59:16 (15976): Disabling Drag and Drop Support for VM.
2025-10-19 19:59:16 (15976): Adding storage controller(s) to VM.
2025-10-19 19:59:17 (15976): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-19 19:59:19 (15976): Adding VirtualBox Guest Additions to VM.
2025-10-19 19:59:19 (15976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-19 19:59:19 (15976): forwarding host port 5533 to guest port 80
2025-10-19 19:59:19 (15976): Enabling remote desktop for VM.
2025-10-19 19:59:20 (15976): Enabling shared directory for VM.
2025-10-19 19:59:21 (15976): Starting VM using VBoxManage interface. (boinc_02a3870be56d0275, slot#4)
2025-10-19 19:59:27 (15976): Successfully started VM. (PID = '1860')
2025-10-19 19:59:27 (15976): Reporting VM Process ID to BOINC.
2025-10-19 19:59:27 (15976): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-19 19:59:27 (15976): Guest Log: CPUID EDX: 0x178bfbff
2025-10-19 19:59:27 (15976): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-19 19:59:27 (15976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-19 19:59:27 (15976): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-19 19:59:27 (15976): Detected: Web Application Enabled (http://localhost:5533)
2025-10-19 19:59:27 (15976): Detected: Remote Desktop Enabled (localhost:5534)
2025-10-19 19:59:27 (15976): Preference change detected
2025-10-19 19:59:27 (15976): Setting CPU throttle for VM. (100%)
2025-10-19 19:59:27 (15976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-19 19:59:29 (15976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-19 19:59:29 (15976): Guest Log: BIOS: Booting from Hard Disk...
2025-10-19 19:59:32 (15976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-19 19:59:32 (15976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-19 19:59:32 (15976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-19 19:59:38 (15976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-19 19:59:38 (15976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-19 19:59:42 (15976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000132 main     Log opened 2025-10-19T19:59:40.799205000Z
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000231 main     OS Product: Linux
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000297 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000400 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000441 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000442 main     Process ID: 1372
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.000442 main     Package type: LINUX_64BITS_GENERIC
2025-10-19 19:59:42 (15976): Guest Log: 00:00:00.001525 main     5.2.32 r132073 started. Verbose level = 0
2025-10-19 19:59:43 (15976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-19 19:59:43 (15976): Guest Log: [INFO] Mounting shared directory
2025-10-19 19:59:43 (15976): Guest Log: [INFO] Checking for init_data.xml
2025-10-19 19:59:46 (15976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-19 19:59:46 (15976): Guest Log: [INFO] Detected branch: prod
2025-10-19 19:59:51 (15976): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-19 19:59:51 (15976): Guest Log: Copying input files
2025-10-19 19:59:52 (15976): Guest Log: Copied input files into RunAtlas.
2025-10-19 19:59:52 (15976): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-19 19:59:52 (15976): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-19 19:59:52 (15976): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-19 19:59:52 (15976): Guest Log: Further information can be found at the LHC@home message board.
2025-10-19 19:59:53 (15976): Guest Log: 00:00:10.025641 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 518 919 000ns (GuestNow=1 760 893 192 282 882 000 ns GuestLast=1 760 903 980 801 801 000 ns fSetTimeLastLoop=true )
2025-10-19 20:00:03 (15976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-19 20:00:03 (15976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-19 20:00:03 (15976): Guest Log: 2.6.3.0 1648 0 32164 151893 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-19 20:00:03 (15976): Guest Log: copied the webapp to /var/www
2025-10-19 20:00:03 (15976): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-19 20:00:03 (15976): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-19 20:00:03 (15976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-19 20:00:03 (15976): Guest Log:  *** Starting ATLAS job. (PandaID=6840182492 taskID=46676269) ***
2025-10-19 21:39:42 (15976): Status Report: Elapsed Time: '6000.000000'
2025-10-19 21:39:42 (15976): Status Report: CPU Time: '44263.140625'
2025-10-19 21:57:02 (15976): Guest Log:  *** Job finished ***
2025-10-19 21:57:02 (15976): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:56:37,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:56:37,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:56:56,001 | INFO     | [monitor] cgroup control has ended
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:56:56,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008100112192)>', '<ExcThread(monitor, started 140007503275776)>']
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:56:56,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:56:56,421 | INFO     | [monitor] control thread has ended
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,043 | INFO     | all workflow threads have been joined
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,043 | INFO     | end of generic workflow (traces error code: 0)
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,043 | INFO     | traces error code: 0
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,114 [wrapper] ==== pilot stdout END ====
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,118 [wrapper] ==== wrapper stdout RESUME ====
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,122 [wrapper] pilotpid: 6066
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,127 [wrapper] Pilot exit status: 0
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,214 [wrapper] pandaids: 6840182492
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,240 [wrapper] cleanup supervisor_pilot  3588 6067
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,244 [wrapper] Test setup, not cleaning
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,250 [wrapper] apfmon messages muted
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,254 [wrapper] ==== wrapper stdout END ====
2025-10-19 21:57:02 (15976): Guest Log: 2025-10-19 18:57:01,258 [wrapper] ==== wrapper stderr END ====
2025-10-19 21:57:02 (15976): Guest Log:  *** Error codes and diagnostics ***
2025-10-19 21:57:02 (15976): Guest Log:     "exeErrorCode": 0,
2025-10-19 21:57:02 (15976): Guest Log:     "exeErrorDiag": "",
2025-10-19 21:57:02 (15976): Guest Log:     "pilotErrorCode": 0,
2025-10-19 21:57:02 (15976): Guest Log:     "pilotErrorDiag": "",
2025-10-19 21:57:02 (15976): Guest Log:  *** Listing of results directory ***
2025-10-19 21:57:02 (15976): Guest Log: total 199168
2025-10-19 21:57:02 (15976): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 14:30 pilot3.tar.gz
2025-10-19 21:57:02 (15976): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 14:50 queuedata.json
2025-10-19 21:57:02 (15976): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 14:50 runpilot2-wrapper.sh
2025-10-19 21:57:02 (15976): Guest Log: -rwxr-xr-x. 1 atlas atlas      9078 Oct 19 16:59 init_data.xml
2025-10-19 21:57:02 (15976): Guest Log: -rwxr-xr-x. 1 atlas atlas    569677 Oct 19 16:59 input.tar.gz
2025-10-19 21:57:02 (15976): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 19 16:59 start_atlas.sh
2025-10-19 21:57:02 (15976): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 19 16:59 EVNT.46676267._004539.pool.root.1 -> /data/./ATLAS.root_0
2025-10-19 21:57:02 (15976): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct 19 17:00 pandaJob.out
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas    976750 Oct 19 17:00 agis_schedconf.cvmfs.json
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 17:00 agis_ddmendpoints.agis.ALL.json
2025-10-19 21:57:02 (15976): Guest Log: drwx------. 5 atlas atlas      4096 Oct 19 17:00 pilot3
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas 197566988 Oct 19 18:55 HITS.46676269._081337.pool.root.1
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 18:55 pilot_heartbeat.json
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 19 18:55 memory_monitor_summary.json
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas    340335 Oct 19 18:55 log.46676269._081337.job.log.tgz.1
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas      7825 Oct 19 18:56 heartbeat.json
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 19 18:57 pilotlog.txt
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas    931931 Oct 19 18:57 log.46676269._081337.job.log.1
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 18:57 output.list
2025-10-19 21:57:02 (15976): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 18:57 runtime_log
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas   1290240 Oct 19 18:57 result.tar.gz
2025-10-19 21:57:02 (15976): Guest Log: -rw-r--r--. 1 atlas atlas      8624 Oct 19 18:57 runtime_log.err
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas       648 Oct 19 18:57 ofGNDmaaCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDAUMDm1pNx2m.diag
2025-10-19 21:57:02 (15976): Guest Log: Looking for outputfile HITS.46676269._081337.pool.root.1
2025-10-19 21:57:02 (15976): Guest Log: HITS file was successfully produced
2025-10-19 21:57:02 (15976): Guest Log: -rw-------. 1 atlas atlas 197566988 Oct 19 18:55 /home/atlas/RunAtlas/HITS.46676269._081337.pool.root.1
2025-10-19 21:57:03 (15976): Guest Log: Successfully finished the ATLAS job!
2025-10-19 21:57:03 (15976): Guest Log: Copying the results back to the shared directory!
2025-10-19 21:57:03 (15976): Guest Log:  *** Contents of shared directory: ***
2025-10-19 21:57:03 (15976): Guest Log: total 411656
2025-10-19 21:57:03 (15976): Guest Log: -rwxrwxrwx. 1 root root 222071713 Oct 19 16:59 ATLAS.root_0
2025-10-19 21:57:03 (15976): Guest Log: -rwxrwxrwx. 1 root root 197566988 Oct 19 18:57 HITS.pool.root.1
2025-10-19 21:57:03 (15976): Guest Log: -rwxrwxrwx. 1 root root      9078 Oct 19 16:59 init_data.xml
2025-10-19 21:57:03 (15976): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 19 16:15 input.tar.gz
2025-10-19 21:57:03 (15976): Guest Log: -rwxrwxrwx. 1 root root   1290240 Oct 19 18:57 result.tar.gz
2025-10-19 21:57:03 (15976): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 19 16:15 start_atlas.sh
2025-10-19 21:57:03 (15976): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-19 21:57:03 (15976): VM Completion File Detected.
2025-10-19 21:57:03 (15976): Powering off VM.
2025-10-19 21:57:03 (15976): Successfully stopped VM.
2025-10-19 21:57:03 (15976): Deregistering VM. (boinc_02a3870be56d0275, slot#4)
2025-10-19 21:57:04 (15976): Removing network bandwidth throttle group from VM.
2025-10-19 21:57:04 (15976): Removing VM from VirtualBox.
2025-10-19 21:57:09 (15976): called boinc_finish(0)

</stderr_txt>
]]>

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