Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-19 05:18:59 (646252): vboxwrapper version 26210
2025-10-19 05:18:59 (646252): BOINC client version: 7.14.2
2025-10-19 05:19:00 (646252): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2025-10-19 05:19:00 (646252): Successfully copied 'init_data.xml' to the shared directory.
2025-10-19 05:19:00 (646252): Create VM. (boinc_22e8fa37c960f590, slot#9)
2025-10-19 05:19:01 (646252): Setting Memory Size for VM. (4200MB)
2025-10-19 05:19:03 (646252): Setting CPU Count for VM. (2)
2025-10-19 05:19:03 (646252): Setting Chipset Options for VM.
2025-10-19 05:19:03 (646252): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-19 05:19:04 (646252): Setting Boot Options for VM.
2025-10-19 05:19:04 (646252): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-19 05:19:04 (646252): Enabling VM Network Access.
2025-10-19 05:19:05 (646252): Disabling USB Support for VM.
2025-10-19 05:19:05 (646252): Disabling COM Port Support for VM.
2025-10-19 05:19:05 (646252): Disabling LPT Port Support for VM.
2025-10-19 05:19:05 (646252): Disabling Audio Support for VM.
2025-10-19 05:19:06 (646252): Disabling Clipboard Support for VM.
2025-10-19 05:19:06 (646252): Disabling Drag and Drop Support for VM.
2025-10-19 05:19:06 (646252): Adding storage controller(s) to VM.
2025-10-19 05:19:07 (646252): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-19 05:19:07 (646252): Adding VirtualBox Guest Additions to VM.
2025-10-19 05:19:07 (646252): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-19 05:19:08 (646252): forwarding host port 53513 to guest port 80
2025-10-19 05:19:08 (646252): Enabling remote desktop for VM.
2025-10-19 05:19:08 (646252): Enabling shared directory for VM.
2025-10-19 05:19:09 (646252): Starting VM using VBoxManage interface. (boinc_22e8fa37c960f590, slot#9)
2025-10-19 05:19:14 (646252): Successfully started VM. (PID = '652980')
2025-10-19 05:19:14 (646252): Reporting VM Process ID to BOINC.
2025-10-19 05:19:14 (646252): Guest Log: BIOS: VirtualBox 6.1.40
2025-10-19 05:19:14 (646252): Guest Log: CPUID EDX: 0x178bfbff
2025-10-19 05:19:14 (646252): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-19 05:19:14 (646252): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-19 05:19:14 (646252): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-19 05:19:14 (646252): Detected: Web Application Enabled (http://localhost:53513)
2025-10-19 05:19:14 (646252): Detected: Remote Desktop Enabled (localhost:53514)
2025-10-19 05:19:14 (646252): Preference change detected
2025-10-19 05:19:14 (646252): Setting CPU throttle for VM. (100%)
2025-10-19 05:19:15 (646252): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-19 05:19:16 (646252): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-19 05:19:16 (646252): Guest Log: BIOS: Booting from Hard Disk...
2025-10-19 05:19:19 (646252): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-19 05:19:19 (646252): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-19 05:19:19 (646252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-19 05:19:25 (646252): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-19 05:19:25 (646252): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-19 05:19:31 (646252): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000159 main     Log opened 2025-10-19T05:19:30.108718000Z
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000243 main     OS Product: Linux
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000282 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000318 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000349 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000349 main     Process ID: 1260
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.000350 main     Package type: LINUX_64BITS_GENERIC
2025-10-19 05:19:31 (646252): Guest Log: 00:00:00.001947 main     5.2.32 r132073 started. Verbose level = 0
2025-10-19 05:19:31 (646252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-19 05:19:31 (646252): Guest Log: [INFO] Mounting shared directory
2025-10-19 05:19:31 (646252): Guest Log: [INFO] Checking for init_data.xml
2025-10-19 05:19:35 (646252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-19 05:19:35 (646252): Guest Log: [INFO] Detected branch: prod
2025-10-19 05:19:35 (646252): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-19 05:19:35 (646252): Guest Log: Copying input files
2025-10-19 05:19:36 (646252): Guest Log: Copied input files into RunAtlas.
2025-10-19 05:19:36 (646252): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-19 05:19:36 (646252): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-19 05:19:36 (646252): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-19 05:19:36 (646252): Guest Log: Further information can be found at the LHC@home message board.
2025-10-19 05:19:41 (646252): Guest Log: 00:00:10.005128 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 437 043 000ns (GuestNow=1 760 865 581 549 788 000 ns GuestLast=1 760 851 170 112 745 000 ns fSetTimeLastLoop=true )
2025-10-19 05:19:44 (646252): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-19 05:19:44 (646252): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-19 05:19:44 (646252): Guest Log: 2.6.3.0 1536 0 32116 151880 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-19 05:19:45 (646252): Guest Log: copied the webapp to /var/www
2025-10-19 05:19:45 (646252): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-19 05:19:45 (646252): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-19 05:19:46 (646252): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-19 05:19:46 (646252): Guest Log:  *** Starting ATLAS job. (PandaID=6840428523 taskID=46676269) ***
2025-10-19 06:36:21 (646252): VM state change detected. (old = 'running', new = 'paused')
2025-10-19 06:36:24 (646252): VM state change detected. (old = 'paused', new = 'running')
2025-10-19 06:59:22 (646252): Status Report: Elapsed Time: '6000.000000'
2025-10-19 06:59:22 (646252): Status Report: CPU Time: '11540.015625'
2025-10-19 08:39:30 (646252): Status Report: Elapsed Time: '12000.000000'
2025-10-19 08:39:30 (646252): Status Report: CPU Time: '23524.421875'
2025-10-19 10:19:36 (646252): Status Report: Elapsed Time: '18000.000000'
2025-10-19 10:19:36 (646252): Status Report: CPU Time: '35505.328125'
2025-10-19 11:59:42 (646252): Status Report: Elapsed Time: '24000.000000'
2025-10-19 11:59:42 (646252): Status Report: CPU Time: '47486.828125'
2025-10-19 13:39:49 (646252): Status Report: Elapsed Time: '30000.000000'
2025-10-19 13:39:49 (646252): Status Report: CPU Time: '59469.281250'
2025-10-19 13:54:04 (646252): Guest Log:  *** Job finished ***
2025-10-19 13:54:04 (646252): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:53:53,604 | INFO     | all workflow threads have been joined
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:53:53,605 | INFO     | end of generic workflow (traces error code: 0)
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:53:53,605 | INFO     | traces error code: 0
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:53:53,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,264 | INFO     | PID=5910 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,265 | INFO     | found 0 job(s) in 20 queues
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,266 | INFO     | [monitor] control thread has ended
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,455 [wrapper] ==== pilot stdout END ====
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,462 [wrapper] ==== wrapper stdout RESUME ====
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,470 [wrapper] pilotpid: 5910
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,478 [wrapper] Pilot exit status: 0
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,534 [wrapper] pandaids: 6840428523
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,579 [wrapper] cleanup supervisor_pilot 10389 5911
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,588 [wrapper] Test setup, not cleaning
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,596 [wrapper] apfmon messages muted
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,604 [wrapper] ==== wrapper stdout END ====
2025-10-19 13:54:04 (646252): Guest Log: 2025-10-19 17:54:02,612 [wrapper] ==== wrapper stderr END ====
2025-10-19 13:54:04 (646252): Guest Log:  *** Error codes and diagnostics ***
2025-10-19 13:54:04 (646252): Guest Log:     "exeErrorCode": 0,
2025-10-19 13:54:04 (646252): Guest Log:     "exeErrorDiag": "",
2025-10-19 13:54:04 (646252): Guest Log:     "pilotErrorCode": 0,
2025-10-19 13:54:04 (646252): Guest Log:     "pilotErrorDiag": "",
2025-10-19 13:54:04 (646252): Guest Log:  *** Listing of results directory ***
2025-10-19 13:54:04 (646252): Guest Log: total 205896
2025-10-19 13:54:04 (646252): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 16:49 pilot3.tar.gz
2025-10-19 13:54:04 (646252): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 16:52 queuedata.json
2025-10-19 13:54:04 (646252): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 16:54 runpilot2-wrapper.sh
2025-10-19 13:54:04 (646252): Guest Log: -rwxr-xr-x. 1 atlas atlas      9014 Oct 19 09:19 init_data.xml
2025-10-19 13:54:04 (646252): Guest Log: -rwxr-xr-x. 1 atlas atlas    569681 Oct 19 09:19 input.tar.gz
2025-10-19 13:54:04 (646252): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 19 09:19 start_atlas.sh
2025-10-19 13:54:04 (646252): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 19 09:19 EVNT.46676267._004789.pool.root.1 -> /data/./ATLAS.root_0
2025-10-19 13:54:04 (646252): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 19 09:19 pandaJob.out
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas    976750 Oct 19 09:20 agis_schedconf.cvmfs.json
2025-10-19 13:54:04 (646252): Guest Log: drwx------. 5 atlas atlas      4096 Oct 19 09:20 pilot3
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas 197417845 Oct 19 17:52 HITS.46676269._084125.pool.root.1
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas      1027 Oct 19 17:53 memory_monitor_summary.json
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 17:53 agis_ddmendpoints.agis.ALL.json
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas    608305 Oct 19 17:53 log.46676269._084125.job.log.tgz.1
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 17:53 pilot_heartbeat.json
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas      7819 Oct 19 17:53 heartbeat.json
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas       744 Oct 19 17:54 pilotlog.txt
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas   4188534 Oct 19 17:54 log.46676269._084125.job.log.1
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 17:54 output.list
2025-10-19 13:54:04 (646252): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 17:54 runtime_log
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas   4812800 Oct 19 17:54 result.tar.gz
2025-10-19 13:54:04 (646252): Guest Log: -rw-r--r--. 1 atlas atlas      8622 Oct 19 17:54 runtime_log.err
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas       653 Oct 19 17:54 K8KNDmHWES8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1TUMDmD2MECn.diag
2025-10-19 13:54:04 (646252): Guest Log: Looking for outputfile HITS.46676269._084125.pool.root.1
2025-10-19 13:54:04 (646252): Guest Log: HITS file was successfully produced
2025-10-19 13:54:04 (646252): Guest Log: -rw-------. 1 atlas atlas 197417845 Oct 19 17:52 /home/atlas/RunAtlas/HITS.46676269._084125.pool.root.1
2025-10-19 13:54:05 (646252): Guest Log: Successfully finished the ATLAS job!
2025-10-19 13:54:05 (646252): Guest Log: Copying the results back to the shared directory!
2025-10-19 13:54:05 (646252): Guest Log:  *** Contents of shared directory: ***
2025-10-19 13:54:05 (646252): Guest Log: total 414372
2025-10-19 13:54:05 (646252): Guest Log: -rwxrwxrwx. 1 root root 221480488 Oct 19 09:18 ATLAS.root_0
2025-10-19 13:54:05 (646252): Guest Log: -rwxrwxrwx. 1 root root 197417845 Oct 19 17:54 HITS.pool.root.1
2025-10-19 13:54:05 (646252): Guest Log: -rwxrwxrwx. 1 root root      9014 Oct 19 09:18 init_data.xml
2025-10-19 13:54:05 (646252): Guest Log: -rwxrwxrwx. 1 root root    569681 Oct 19 09:18 input.tar.gz
2025-10-19 13:54:05 (646252): Guest Log: -rwxrwxrwx. 1 root root   4812800 Oct 19 17:54 result.tar.gz
2025-10-19 13:54:05 (646252): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 19 09:18 start_atlas.sh
2025-10-19 13:54:05 (646252): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-19 13:54:05 (646252): VM Completion File Detected.
2025-10-19 13:54:05 (646252): Powering off VM.
2025-10-19 13:54:07 (646252): Successfully stopped VM.
2025-10-19 13:54:07 (646252): Deregistering VM. (boinc_22e8fa37c960f590, slot#9)
2025-10-19 13:54:07 (646252): Removing network bandwidth throttle group from VM.
2025-10-19 13:54:07 (646252): Removing VM from VirtualBox.
2025-10-19 13:54:12 (646252): called boinc_finish(0)

</stderr_txt>
]]>

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