Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:20:18 (8883): wrapper (7.7.26015): starting
04:20:18 (8883): wrapper: running run_atlas (--nthreads 8)
[2025-10-19 04:20:18] Arguments: --nthreads 8
[2025-10-19 04:20:18] Threads: 8
[2025-10-19 04:20:18] Checking for CVMFS
[2025-10-19 04:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 04:20:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 04:20:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 04:20:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 04:20:18] 2.11.2.0 3026 23643 80344 151880 0 1 19638590 20275200 1 130560 0 14162249 99.981 1099589 36960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-19 04:20:18] CVMFS is ok
[2025-10-19 04:20:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 04:20:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 04:20:18] Further information can be found at the LHC@home message board.
[2025-10-19 04:20:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 04:20:18] Checking for apptainer binary...
[2025-10-19 04:20:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 04:20:18] Running /usr/bin/apptainer --version
[2025-10-19 04:20:18] apptainer version 1.3.2-1.el7
[2025-10-19 04:20:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 04:20:20] c-204-25.aglt2.org
[2025-10-19 04:20:20] apptainer works
[2025-10-19 04:20:20] Set ATHENA_PROC_NUMBER=8
[2025-10-19 04:20:20] Set ATHENA_CORE_NUMBER=8
[2025-10-19 04:20:20] Starting ATLAS job with PandaID=6839319297
[2025-10-19 04:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 06:30:57]  *** The last 200 lines of the pilot log: ***
[2025-10-19 06:30:57] 2025-10-19 10:29:49,749 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 06:30:57] 2025-10-19 10:29:49,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 06:30:57] 2025-10-19 10:29:49,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 06:30:57] 2025-10-19 10:29:49,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 06:30:57] 2025-10-19 10:29:49,752 | INFO     | fitting pss+swap vs Time
[2025-10-19 06:30:57] 2025-10-19 10:29:49,752 | INFO     | sum of square deviations: 635130048.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,753 | INFO     | sum of deviations: -17111364552.999998
[2025-10-19 06:30:57] 2025-10-19 10:29:49,753 | INFO     | mean x: 1760865914.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,753 | INFO     | mean y: 2557141.094488189
[2025-10-19 06:30:57] 2025-10-19 10:29:49,753 | INFO     | -- intersect: 47442949354.13232
[2025-10-19 06:30:57] 2025-10-19 10:29:49,753 | INFO     | intersect: 47442949354.13232
[2025-10-19 06:30:57] 2025-10-19 10:29:49,754 | INFO     | chi2: 2.4236702394629446
[2025-10-19 06:30:57] 2025-10-19 10:29:49,754 | INFO     | sum of square deviations: 563026370.5
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | sum of deviations: -7314912416.9999895
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | mean x: 1760865761.5
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | mean y: 2577298.37704918
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | -- intersect: 22879976117.24195
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | intersect: 22879976117.24195
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | chi2: 1.6631052071417216
[2025-10-19 06:30:57] 2025-10-19 10:29:49,755 | INFO     | current chi2=1.6631052071417216 (change=31.380714254665055 %)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,756 | INFO     | sum of square deviations: 496597218.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,756 | INFO     | sum of deviations: -6020309783.000004
[2025-10-19 06:30:57] 2025-10-19 10:29:49,756 | INFO     | mean x: 1760865609.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,757 | INFO     | mean y: 2580273.2564102565
[2025-10-19 06:30:57] 2025-10-19 10:29:49,757 | INFO     | -- intersect: 21349772863.47136
[2025-10-19 06:30:57] 2025-10-19 10:29:49,757 | INFO     | intersect: 21349772863.47136
[2025-10-19 06:30:57] 2025-10-19 10:29:49,757 | INFO     | chi2: 1.6649305079611703
[2025-10-19 06:30:57] 2025-10-19 10:29:49,757 | INFO     | current chi2=1.6649305079611703 (change=-0.10975257678290141 %)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,757 | INFO     | right removable region: 116
[2025-10-19 06:30:57] 2025-10-19 10:29:49,758 | INFO     | sum of square deviations: 563026370.5
[2025-10-19 06:30:57] 2025-10-19 10:29:49,758 | INFO     | sum of deviations: -36914903655.000015
[2025-10-19 06:30:57] 2025-10-19 10:29:49,758 | INFO     | mean x: 1760866066.5
[2025-10-19 06:30:57] 2025-10-19 10:29:49,758 | INFO     | mean y: 2598287.7868852457
[2025-10-19 06:30:57] 2025-10-19 10:29:49,759 | INFO     | -- intersect: 115454031115.84543
[2025-10-19 06:30:57] 2025-10-19 10:29:49,759 | INFO     | intersect: 115454031115.84543
[2025-10-19 06:30:57] 2025-10-19 10:29:49,759 | INFO     | chi2: 0.8982237184065802
[2025-10-19 06:30:57] 2025-10-19 10:29:49,759 | INFO     | current chi2=0.8982237184065802 (change=62.93952437169772 %)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,759 | INFO     | sum of square deviations: 496597218.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,760 | INFO     | sum of deviations: -34554922052.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,760 | INFO     | mean x: 1760866219.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,760 | INFO     | mean y: 2592848.2735042735
[2025-10-19 06:30:57] 2025-10-19 10:29:49,760 | INFO     | -- intersect: 122529648449.99248
[2025-10-19 06:30:57] 2025-10-19 10:29:49,760 | INFO     | intersect: 122529648449.99248
[2025-10-19 06:30:57] 2025-10-19 10:29:49,761 | INFO     | chi2: 0.8952037298312372
[2025-10-19 06:30:57] 2025-10-19 10:29:49,761 | INFO     | current chi2=0.8952037298312372 (change=0.3362178612584832 %)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,761 | INFO     | left removable region: 20
[2025-10-19 06:30:57] 2025-10-19 10:29:49,761 | INFO     | sum of square deviations: 274312120.0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,762 | INFO     | sum of deviations: -18086028134.5
[2025-10-19 06:30:57] 2025-10-19 10:29:49,762 | INFO     | mean x: 1760866188.5
[2025-10-19 06:30:57] 2025-10-19 10:29:49,762 | INFO     | mean y: 2607879.96875
[2025-10-19 06:30:57] 2025-10-19 10:29:49,762 | INFO     | -- intersect: 116100560191.73965
[2025-10-19 06:30:57] 2025-10-19 10:29:49,762 | INFO     | intersect: 116100560191.73965
[2025-10-19 06:30:57] 2025-10-19 10:29:49,762 | INFO     | chi2: 0.08353320388128357
[2025-10-19 06:30:57] 2025-10-19 10:29:49,763 | INFO     | -- intersect: 116100560191.73965
[2025-10-19 06:30:57] 2025-10-19 10:29:49,763 | INFO     | current memory leak: -65.93 B/s (using 96 data points, chi2=0.08)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,763 | INFO     | could have reported an average CPU frequency of 2001 MHz (8 samples)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,763 | INFO     | ..............................
[2025-10-19 06:30:57] 2025-10-19 10:29:49,763 | INFO     | . Timing measurements:
[2025-10-19 06:30:57] 2025-10-19 10:29:49,763 | INFO     | . get job = 0 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | . initial setup = 2 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | . payload setup = 8 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | . stage-in = 0 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | . payload execution = 7707 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | . stage-out = 0 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | . log creation = 0 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,764 | INFO     | ..............................
[2025-10-19 06:30:57] 2025-10-19 10:29:49,855 | INFO     | 
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | job summary report
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | --------------------------------------------------
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | PanDA job id: 6839319297
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | task id: 46676269
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | errors: (none)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 06:30:57] 2025-10-19 10:29:49,856 | INFO     | pilot state: finished 
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | transexitcode: 0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | exeerrorcode: 0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | exeerrordiag: 
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | exitcode: 0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | exitmsg: OK
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | cpuconsumptiontime: 57714 s
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | nevents: 400
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | neventsw: 0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,857 | INFO     | pid: 19041
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | pgrp: 19041
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | corecount: 8
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | event service: False
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | sizes: {0: 2348921, 6: 2349183, 11: 2349211, 7719: 2376814, 7720: 2376813, 7721: 2385867, 7725: 2386051, 7733: 2386245}
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | --------------------------------------------------
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | 
[2025-10-19 06:30:57] 2025-10-19 10:29:49,858 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-19 06:30:57] 2025-10-19 10:29:49,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 06:30:57] 2025-10-19 10:29:49,893 | INFO     | job 6839319297 has completed (purged errors)
[2025-10-19 06:30:57] 2025-10-19 10:29:49,893 | INFO     | overall cleanup function is called
[2025-10-19 06:30:57] 2025-10-19 10:29:50,902 | INFO     | --- collectZombieJob: --- 10, [19041]
[2025-10-19 06:30:57] 2025-10-19 10:29:50,902 | INFO     | zombie collector waiting for pid 19041
[2025-10-19 06:30:57] 2025-10-19 10:29:50,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 06:30:57] 2025-10-19 10:29:50,902 | INFO     | collected zombie processes
[2025-10-19 06:30:57] 2025-10-19 10:29:50,903 | INFO     | will attempt to kill all subprocesses of pid=19041
[2025-10-19 06:30:57] 2025-10-19 10:29:50,994 | INFO     | process IDs to be killed: [19041] (in reverse order)
[2025-10-19 06:30:57] 2025-10-19 10:29:51,050 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 06:30:57] 2025-10-19 10:29:51,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 06:30:57] 2025-10-19 10:29:51,057 | INFO     | did not find any defunct processes belonging to 19041
[2025-10-19 06:30:57] 2025-10-19 10:29:51,060 | INFO     | did not find any defunct processes belonging to 19041
[2025-10-19 06:30:57] 2025-10-19 10:29:51,060 | INFO     | ready for new job
[2025-10-19 06:30:57] 2025-10-19 10:29:51,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 06:30:57] 2025-10-19 10:29:51,062 | INFO     | ***************************************
[2025-10-19 06:30:57] 2025-10-19 10:29:51,062 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 06:30:57] 2025-10-19 10:29:51,062 | INFO     | ***************************************
[2025-10-19 06:30:57] 2025-10-19 10:29:51,062 | INFO     | 
[2025-10-19 06:30:57] 2025-10-19 10:29:51,063 | INFO     | architecture information:
[2025-10-19 06:30:57] 2025-10-19 10:29:51,063 | INFO     | executing command: cat /etc/os-release
[2025-10-19 06:30:57] 2025-10-19 10:29:51,082 | INFO     | cat /etc/os-release:
[2025-10-19 06:30:57] NAME="CentOS Linux"
[2025-10-19 06:30:57] VERSION="7 (Core)"
[2025-10-19 06:30:57] ID="centos"
[2025-10-19 06:30:57] ID_LIKE="rhel fedora"
[2025-10-19 06:30:57] VERSION_ID="7"
[2025-10-19 06:30:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 06:30:57] ANSI_COLOR="0;31"
[2025-10-19 06:30:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 06:30:57] HOME_URL="https://www.centos.org/"
[2025-10-19 06:30:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 06:30:57] 
[2025-10-19 06:30:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 06:30:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 06:30:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 06:30:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 06:30:57] 
[2025-10-19 06:30:57] 2025-10-19 10:29:51,082 | INFO     | ***************************************
[2025-10-19 06:30:57] 2025-10-19 10:29:51,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-19 06:30:57] 2025-10-19 10:29:51,605 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-10-19 06:30:57] 2025-10-19 10:29:51,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 06:30:57] 2025-10-19 10:29:51,606 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 06:30:57] 2025-10-19 10:29:51,606 | INFO     | update_server=False
[2025-10-19 06:30:57] 2025-10-19 10:29:51,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 06:30:57] 2025-10-19 10:29:51,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 06:30:57] 2025-10-19 10:29:51,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 06:30:57] 2025-10-19 10:29:51,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 06:30:57] 2025-10-19 10:29:51,784 | INFO     | aborting loop
[2025-10-19 06:30:57] 2025-10-19 10:29:52,003 | INFO     | all job control threads have been joined
[2025-10-19 06:30:57] 2025-10-19 10:29:52,118 | INFO     | all data control threads have been joined
[2025-10-19 06:30:57] 2025-10-19 10:29:52,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 06:30:57] 2025-10-19 10:29:52,589 | INFO     | all payload control threads have been joined
[2025-10-19 06:30:57] 2025-10-19 10:29:52,612 | INFO     | [job] retrieve thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:52,613 | INFO     | [job] queue monitor thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:52,790 | INFO     | [job] job monitor thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:52,879 | INFO     | [payload] failed_post thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,009 | INFO     | [job] control thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,124 | INFO     | [data] control thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,401 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,413 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,453 | INFO     | [payload] validate_post thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,594 | INFO     | [payload] control thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,613 | INFO     | [data] copytool_out thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,755 | INFO     | [data] copytool_in thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:53,927 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:54,082 | INFO     | [job] validate thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:29:56,248 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 06:30:57] 2025-10-19 10:30:22,773 | INFO     | PID=12563 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-19 06:30:57] 2025-10-19 10:30:22,774 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 06:30:57] 2025-10-19 10:30:22,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 06:30:57] 2025-10-19 10:30:22,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 06:30:57] 2025-10-19 10:30:51,294 | INFO     | [monitor] cgroup control has ended
[2025-10-19 06:30:57] 2025-10-19 10:30:51,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361995708224)>', '<ExcThread(monitor, started 140361208952576)>']
[2025-10-19 06:30:57] 2025-10-19 10:30:51,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 06:30:57] 2025-10-19 10:30:51,890 | INFO     | [monitor] control thread has ended
[2025-10-19 06:30:57] 2025-10-19 10:30:56,795 | INFO     | all workflow threads have been joined
[2025-10-19 06:30:57] 2025-10-19 10:30:56,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 06:30:57] 2025-10-19 10:30:56,796 | INFO     | traces error code: 0
[2025-10-19 06:30:57] 2025-10-19 10:30:56,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 06:30:57] 2025-10-19 10:30:56,915 [wrapper] ==== pilot stdout END ====
[2025-10-19 06:30:57] 2025-10-19 10:30:56,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 06:30:57] 2025-10-19 10:30:56,924 [wrapper] pilotpid: 12563
[2025-10-19 06:30:57] 2025-10-19 10:30:56,928 [wrapper] Pilot exit status: 0
[2025-10-19 06:30:57] 2025-10-19 10:30:56,947 [wrapper] pandaids: 6839319297
[2025-10-19 06:30:57] 2025-10-19 10:30:56,999 [wrapper] cleanup supervisor_pilot  6077 12564
[2025-10-19 06:30:57] 2025-10-19 10:30:57,004 [wrapper] Test setup, not cleaning
[2025-10-19 06:30:57] 2025-10-19 10:30:57,009 [wrapper] apfmon messages muted
[2025-10-19 06:30:57] 2025-10-19 10:30:57,014 [wrapper] ==== wrapper stdout END ====
[2025-10-19 06:30:57] 2025-10-19 10:30:57,018 [wrapper] ==== wrapper stderr END ====
[2025-10-19 06:30:57]  *** Error codes and diagnostics ***
[2025-10-19 06:30:57]     "exeErrorCode": 0,
[2025-10-19 06:30:57]     "exeErrorDiag": "",
[2025-10-19 06:30:57]     "pilotErrorCode": 0,
[2025-10-19 06:30:57]     "pilotErrorDiag": "",
[2025-10-19 06:30:57]  *** Listing of results directory ***
[2025-10-19 06:30:57] total 419328
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-19 06:30:57] -rwx------ 1 boincer umatlas     36292 Oct 11 23:11 runpilot2-wrapper.sh
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 23:11 queuedata.json
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas       100 Oct 19 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 06:30:57] -rwxr-xr-x 1 boincer umatlas      7986 Oct 19 04:20 run_atlas
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas       105 Oct 19 04:20 job.xml
[2025-10-19 06:30:57] -rw-r--r-- 2 boincer umatlas 221990156 Oct 19 04:20 EVNT.46676267._003214.pool.root.1
[2025-10-19 06:30:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 04:20 start_atlas.sh
[2025-10-19 06:30:57] drwxrwx--x 2 boincer umatlas      4096 Oct 19 04:20 shared
[2025-10-19 06:30:57] -rw-r--r-- 2 boincer umatlas    569677 Oct 19 04:20 input.tar.gz
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas         0 Oct 19 04:20 boinc_lockfile
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas      2550 Oct 19 04:20 pandaJob.out
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas    976750 Oct 19 04:20 agis_schedconf.cvmfs.json
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas   1560740 Oct 19 04:20 agis_ddmendpoints.agis.ALL.json
[2025-10-19 06:30:57] drwx------ 5 boincer umatlas      4096 Oct 19 04:20 pilot3
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas 200572552 Oct 19 06:29 HITS.46676269._069999.pool.root.1
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas       529 Oct 19 06:29 boinc_task_state.xml
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas        95 Oct 19 06:29 pilot_heartbeat.json
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas      1049 Oct 19 06:29 memory_monitor_summary.json
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas    375385 Oct 19 06:29 log.46676269._069999.job.log.tgz.1
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas      5910 Oct 19 06:29 init_data.xml
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas      7850 Oct 19 06:29 heartbeat.json
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas      8192 Oct 19 06:30 boinc_mmap_file
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas        27 Oct 19 06:30 wrapper_checkpoint.txt
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas      4746 Oct 19 06:30 pilotlog.txt
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas   1088661 Oct 19 06:30 log.46676269._069999.job.log.1
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas       357 Oct 19 06:30 output.list
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas       620 Oct 19 06:30 runtime_log
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas   1484800 Oct 19 06:30 result.tar.gz
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas      8703 Oct 19 06:30 runtime_log.err
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas       661 Oct 19 06:30 OuYNDmPf1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmx4SMDmIuWq1m.diag
[2025-10-19 06:30:57] -rw-r--r-- 1 boincer umatlas     20870 Oct 19 06:30 stderr.txt
[2025-10-19 06:30:57] HITS file was successfully produced:
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas 200572552 Oct 19 06:29 shared/HITS.pool.root.1
[2025-10-19 06:30:57]  *** Contents of shared directory: ***
[2025-10-19 06:30:57] total 414692
[2025-10-19 06:30:57] -rw-r--r-- 2 boincer umatlas 221990156 Oct 19 04:20 ATLAS.root_0
[2025-10-19 06:30:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 04:20 start_atlas.sh
[2025-10-19 06:30:57] -rw-r--r-- 2 boincer umatlas    569677 Oct 19 04:20 input.tar.gz
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas 200572552 Oct 19 06:29 HITS.pool.root.1
[2025-10-19 06:30:57] -rw------- 1 boincer umatlas   1484800 Oct 19 06:30 result.tar.gz
06:30:59 (8883): run_atlas exited; CPU time 57659.690963
06:30:59 (8883): called boinc_finish(0)

</stderr_txt>
]]>

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