Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-19 16:49:16 (8408): vboxwrapper version 26210
2025-10-19 16:49:16 (8408): BOINC client version: 8.2.4
2025-10-19 16:49:16 (8408): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-19 16:49:16 (8408): Successfully copied 'init_data.xml' to the shared directory.
2025-10-19 16:49:17 (8408): Create VM. (boinc_b2d4b2da8eaf8222, slot#0)
2025-10-19 16:49:17 (8408): Setting Memory Size for VM. (6600MB)
2025-10-19 16:49:18 (8408): Setting CPU Count for VM. (4)
2025-10-19 16:49:18 (8408): Setting Chipset Options for VM.
2025-10-19 16:49:18 (8408): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-19 16:49:18 (8408): Setting Boot Options for VM.
2025-10-19 16:49:19 (8408): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-19 16:49:19 (8408): Enabling VM Network Access.
2025-10-19 16:49:19 (8408): Disabling USB Support for VM.
2025-10-19 16:49:20 (8408): Disabling COM Port Support for VM.
2025-10-19 16:49:20 (8408): Disabling LPT Port Support for VM.
2025-10-19 16:49:20 (8408): Disabling Audio Support for VM.
2025-10-19 16:49:20 (8408): Disabling Clipboard Support for VM.
2025-10-19 16:49:21 (8408): Disabling Drag and Drop Support for VM.
2025-10-19 16:49:21 (8408): Adding storage controller(s) to VM.
2025-10-19 16:49:21 (8408): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-19 16:49:22 (8408): Adding VirtualBox Guest Additions to VM.
2025-10-19 16:49:22 (8408): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-19 16:49:22 (8408): forwarding host port 52638 to guest port 80
2025-10-19 16:49:22 (8408): Enabling remote desktop for VM.
2025-10-19 16:49:23 (8408): Enabling shared directory for VM.
2025-10-19 16:49:24 (8408): Starting VM using VBoxManage interface. (boinc_b2d4b2da8eaf8222, slot#0)
2025-10-19 16:49:30 (8408): Successfully started VM. (PID = '5456')
2025-10-19 16:49:30 (8408): Reporting VM Process ID to BOINC.
2025-10-19 16:49:30 (8408): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-19 16:49:30 (8408): Guest Log: CPUID EDX: 0x178bfbff
2025-10-19 16:49:30 (8408): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-19 16:49:30 (8408): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-19 16:49:30 (8408): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-19 16:49:30 (8408): Detected: Web Application Enabled (http://localhost:52638)
2025-10-19 16:49:30 (8408): Detected: Remote Desktop Enabled (localhost:52639)
2025-10-19 16:49:30 (8408): Preference change detected
2025-10-19 16:49:30 (8408): Setting CPU throttle for VM. (100%)
2025-10-19 16:49:30 (8408): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-19 16:49:32 (8408): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-19 16:49:32 (8408): Guest Log: BIOS: Booting from Hard Disk...
2025-10-19 16:49:35 (8408): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-19 16:49:35 (8408): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-19 16:49:35 (8408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-19 16:49:40 (8408): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-19 16:49:40 (8408): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-19 16:49:46 (8408): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000167 main     Log opened 2025-10-19T16:49:44.609120000Z
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000260 main     OS Product: Linux
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000284 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000304 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000324 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000324 main     Process ID: 1383
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.000325 main     Package type: LINUX_64BITS_GENERIC
2025-10-19 16:49:46 (8408): Guest Log: 00:00:00.001488 main     5.2.32 r132073 started. Verbose level = 0
2025-10-19 16:49:46 (8408): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-19 16:49:46 (8408): Guest Log: [INFO] Mounting shared directory
2025-10-19 16:49:46 (8408): Guest Log: [INFO] Checking for init_data.xml
2025-10-19 16:49:51 (8408): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-19 16:49:51 (8408): Guest Log: [INFO] Detected branch: prod
2025-10-19 16:49:51 (8408): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-19 16:49:51 (8408): Guest Log: Copying input files
2025-10-19 16:49:52 (8408): Guest Log: Copied input files into RunAtlas.
2025-10-19 16:49:52 (8408): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-10-19 16:49:56 (8408): Guest Log: 00:00:10.004669 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 801 107 000ns (GuestNow=1 760 888 995 810 737 000 ns GuestLast=1 760 892 584 611 844 000 ns fSetTimeLastLoop=true )
2025-10-19 16:50:01 (8408): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-19 16:50:01 (8408): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-19 16:50:01 (8408): Guest Log: 2.6.3.0 1662 0 31636 151892 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-10-19 16:50:01 (8408): Guest Log: copied the webapp to /var/www
2025-10-19 16:50:01 (8408): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-19 16:50:01 (8408): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-19 16:50:02 (8408): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-19 16:50:02 (8408): Guest Log:  *** Starting ATLAS job. (PandaID=6848019282 taskID=46771637) ***
2025-10-19 18:29:35 (8408): Status Report: Elapsed Time: '6000.000000'
2025-10-19 18:29:35 (8408): Status Report: CPU Time: '21837.109375'
2025-10-19 20:09:39 (8408): Status Report: Elapsed Time: '12000.000000'
2025-10-19 20:09:39 (8408): Status Report: CPU Time: '45648.000000'
2025-10-19 20:40:50 (8408): Guest Log:  *** Job finished ***
2025-10-19 20:40:50 (8408): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:42,583 | INFO     | all workflow threads have been joined
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:42,583 | INFO     | end of generic workflow (traces error code: 0)
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:42,584 | INFO     | traces error code: 0
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:42,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,001 | INFO     | PID=6060 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,001 | INFO     | found 0 job(s) in 20 queues
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,001 | INFO     | [monitor] control thread has ended
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,123 [wrapper] ==== pilot stdout END ====
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,127 [wrapper] ==== wrapper stdout RESUME ====
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,132 [wrapper] pilotpid: 6060
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,138 [wrapper] Pilot exit status: 0
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,205 [wrapper] pandaids: 6848019282
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,244 [wrapper] cleanup supervisor_pilot 13622 6061
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,250 [wrapper] Test setup, not cleaning
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,255 [wrapper] apfmon messages muted
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,260 [wrapper] ==== wrapper stdout END ====
2025-10-19 20:40:50 (8408): Guest Log: 2025-10-19 19:40:49,265 [wrapper] ==== wrapper stderr END ====
2025-10-19 20:40:50 (8408): Guest Log:  *** Error codes and diagnostics ***
2025-10-19 20:40:50 (8408): Guest Log:     "exeErrorCode": 0,
2025-10-19 20:40:50 (8408): Guest Log:     "exeErrorDiag": "",
2025-10-19 20:40:50 (8408): Guest Log:     "pilotErrorCode": 0,
2025-10-19 20:40:50 (8408): Guest Log:     "pilotErrorDiag": "",
2025-10-19 20:40:50 (8408): Guest Log:  *** Listing of results directory ***
2025-10-19 20:40:50 (8408): Guest Log: total 215804
2025-10-19 20:40:50 (8408): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 18 02:18 pilot3.tar.gz
2025-10-19 20:40:50 (8408): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 18 02:33 queuedata.json
2025-10-19 20:40:50 (8408): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 18 02:35 runpilot2-wrapper.sh
2025-10-19 20:40:50 (8408): Guest Log: -rwxr-xr-x. 1 atlas atlas      9300 Oct 19 15:49 init_data.xml
2025-10-19 20:40:50 (8408): Guest Log: -rwxr-xr-x. 1 atlas atlas    569683 Oct 19 15:49 input.tar.gz
2025-10-19 20:40:50 (8408): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 19 15:49 start_atlas.sh
2025-10-19 20:40:50 (8408): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 19 15:49 EVNT.46771634._000441.pool.root.1 -> /data/./ATLAS.root_0
2025-10-19 20:40:50 (8408): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Oct 19 15:50 pandaJob.out
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas    976742 Oct 19 15:51 agis_schedconf.cvmfs.json
2025-10-19 20:40:50 (8408): Guest Log: drwx------. 5 atlas atlas      4096 Oct 19 15:51 pilot3
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas 212733763 Oct 19 19:39 HITS.46771637._036089.pool.root.1
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 19 19:39 memory_monitor_summary.json
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 19:40 agis_ddmendpoints.agis.ALL.json
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas    375361 Oct 19 19:40 log.46771637._036089.job.log.tgz.1
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 19:40 pilot_heartbeat.json
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas      7793 Oct 19 19:40 heartbeat.json
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas       744 Oct 19 19:40 pilotlog.txt
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas   1834786 Oct 19 19:40 log.46771637._036089.job.log.1
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 19:40 output.list
2025-10-19 20:40:50 (8408): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 19:40 runtime_log
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas   2232320 Oct 19 19:40 result.tar.gz
2025-10-19 20:40:50 (8408): Guest Log: -rw-r--r--. 1 atlas atlas      8621 Oct 19 19:40 runtime_log.err
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas       655 Oct 19 19:40 EpDNDmyxBU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtqvNDmISlqWm.diag
2025-10-19 20:40:50 (8408): Guest Log: Looking for outputfile HITS.46771637._036089.pool.root.1
2025-10-19 20:40:50 (8408): Guest Log: HITS file was successfully produced
2025-10-19 20:40:50 (8408): Guest Log: -rw-------. 1 atlas atlas 212733763 Oct 19 19:39 /home/atlas/RunAtlas/HITS.46771637._036089.pool.root.1
2025-10-19 20:40:51 (8408): Guest Log: Successfully finished the ATLAS job!
2025-10-19 20:40:51 (8408): Guest Log: Copying the results back to the shared directory!
2025-10-19 20:40:51 (8408): Guest Log:  *** Contents of shared directory: ***
2025-10-19 20:40:51 (8408): Guest Log: total 433824
2025-10-19 20:40:51 (8408): Guest Log: -rwxrwxrwx. 1 root root 228664082 Oct 19 15:49 ATLAS.root_0
2025-10-19 20:40:51 (8408): Guest Log: -rwxrwxrwx. 1 root root 212733763 Oct 19 19:40 HITS.pool.root.1
2025-10-19 20:40:51 (8408): Guest Log: -rwxrwxrwx. 1 root root      9300 Oct 19 15:49 init_data.xml
2025-10-19 20:40:51 (8408): Guest Log: -rwxrwxrwx. 1 root root    569683 Oct 19 08:05 input.tar.gz
2025-10-19 20:40:51 (8408): Guest Log: -rwxrwxrwx. 1 root root   2232320 Oct 19 19:40 result.tar.gz
2025-10-19 20:40:51 (8408): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 19 08:05 start_atlas.sh
2025-10-19 20:40:51 (8408): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-19 20:40:51 (8408): VM Completion File Detected.
2025-10-19 20:40:51 (8408): Powering off VM.
2025-10-19 20:40:51 (8408): Successfully stopped VM.
2025-10-19 20:40:51 (8408): Deregistering VM. (boinc_b2d4b2da8eaf8222, slot#0)
2025-10-19 20:40:51 (8408): Removing network bandwidth throttle group from VM.
2025-10-19 20:40:52 (8408): Removing VM from VirtualBox.
2025-10-19 20:40:57 (8408): called boinc_finish(0)

</stderr_txt>
]]>

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