Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:50:14 (7333): wrapper (7.7.26015): starting
01:50:14 (7333): wrapper: running run_atlas (--nthreads 8)
[2025-10-19 01:50:14] Arguments: --nthreads 8
[2025-10-19 01:50:14] Threads: 8
[2025-10-19 01:50:14] Checking for CVMFS
[2025-10-19 01:50:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 01:50:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 01:50:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 01:50:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 01:50:15] 2.11.2.0 7040 62565 133412 151876 1 1 15745015 18432001 1 130560 0 57851189 99.979 2579562 37681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-19 01:50:15] CVMFS is ok
[2025-10-19 01:50:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 01:50:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 01:50:15] Further information can be found at the LHC@home message board.
[2025-10-19 01:50:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 01:50:15] Checking for apptainer binary...
[2025-10-19 01:50:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 01:50:15] Running /usr/bin/apptainer --version
[2025-10-19 01:50:15] apptainer version 1.3.2-1.el7
[2025-10-19 01:50:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 01:50:16] c-206-7.aglt2.org
[2025-10-19 01:50:16] apptainer works
[2025-10-19 01:50:16] Set ATHENA_PROC_NUMBER=8
[2025-10-19 01:50:16] Set ATHENA_CORE_NUMBER=8
[2025-10-19 01:50:16] Starting ATLAS job with PandaID=6837875372
[2025-10-19 01:50:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 04:04:46]  *** The last 200 lines of the pilot log: ***
[2025-10-19 04:04:46] 2025-10-19 08:03:39,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 04:04:46] 2025-10-19 08:03:39,683 | INFO     | fitting pss+swap vs Time
[2025-10-19 04:04:46] 2025-10-19 08:03:39,683 | INFO     | sum of square deviations: 697054930.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,684 | INFO     | sum of deviations: 6527756827.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,684 | INFO     | mean x: 1760857024.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,684 | INFO     | mean y: 2454705.4045801526
[2025-10-19 04:04:46] 2025-10-19 08:03:39,684 | INFO     | -- intersect: -16487560593.370945
[2025-10-19 04:04:46] 2025-10-19 08:03:39,684 | INFO     | intersect: -16487560593.370945
[2025-10-19 04:04:46] 2025-10-19 08:03:39,685 | INFO     | chi2: 2.2054976971006197
[2025-10-19 04:04:46] 2025-10-19 08:03:39,685 | INFO     | sum of square deviations: 620244187.5
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | sum of deviations: 14813529109.5
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | mean x: 1760856871.5
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | mean y: 2470603.007936508
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | -- intersect: -42052747405.18719
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | intersect: -42052747405.18719
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | chi2: 1.372791621214314
[2025-10-19 04:04:46] 2025-10-19 08:03:39,686 | INFO     | current chi2=1.372791621214314 (change=37.75592588380362 %)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,687 | INFO     | sum of square deviations: 549294020.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,687 | INFO     | sum of deviations: 14051779927.999998
[2025-10-19 04:04:46] 2025-10-19 08:03:39,687 | INFO     | mean x: 1760856719.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,687 | INFO     | mean y: 2468967.090909091
[2025-10-19 04:04:46] 2025-10-19 08:03:39,688 | INFO     | -- intersect: -45042935132.025505
[2025-10-19 04:04:46] 2025-10-19 08:03:39,688 | INFO     | intersect: -45042935132.025505
[2025-10-19 04:04:46] 2025-10-19 08:03:39,688 | INFO     | chi2: 1.374927082296566
[2025-10-19 04:04:46] 2025-10-19 08:03:39,688 | INFO     | current chi2=1.374927082296566 (change=-0.15555609819085237 %)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,688 | INFO     | right removable region: 120
[2025-10-19 04:04:46] 2025-10-19 08:03:39,688 | INFO     | sum of square deviations: 620244187.5
[2025-10-19 04:04:46] 2025-10-19 08:03:39,689 | INFO     | sum of deviations: -10967489754.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,689 | INFO     | mean x: 1760857176.5
[2025-10-19 04:04:46] 2025-10-19 08:03:39,689 | INFO     | mean y: 2488732.015873016
[2025-10-19 04:04:46] 2025-10-19 08:03:39,689 | INFO     | -- intersect: 31138907953.229645
[2025-10-19 04:04:46] 2025-10-19 08:03:39,689 | INFO     | intersect: 31138907953.229645
[2025-10-19 04:04:46] 2025-10-19 08:03:39,690 | INFO     | chi2: 0.8880746183113717
[2025-10-19 04:04:46] 2025-10-19 08:03:39,690 | INFO     | current chi2=0.8880746183113717 (change=59.73359575578574 %)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,690 | INFO     | sum of square deviations: 549294020.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,690 | INFO     | sum of deviations: -9089093574.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | mean x: 1760857329.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | mean y: 2484675.958677686
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | -- intersect: 29139151836.0066
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | intersect: 29139151836.0066
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | chi2: 0.8849545174236938
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | current chi2=0.8849545174236938 (change=0.3513331901783886 %)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,691 | INFO     | left removable region: 20
[2025-10-19 04:04:46] 2025-10-19 08:03:39,692 | INFO     | sum of square deviations: 310052325.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,692 | INFO     | sum of deviations: 1415148394.0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,692 | INFO     | mean x: 1760857298.5
[2025-10-19 04:04:46] 2025-10-19 08:03:39,692 | INFO     | mean y: 2495938.96
[2025-10-19 04:04:46] 2025-10-19 08:03:39,692 | INFO     | -- intersect: -8034451947.289372
[2025-10-19 04:04:46] 2025-10-19 08:03:39,692 | INFO     | intersect: -8034451947.289372
[2025-10-19 04:04:46] 2025-10-19 08:03:39,693 | INFO     | chi2: 0.00024632429872949526
[2025-10-19 04:04:46] 2025-10-19 08:03:39,693 | INFO     | -- intersect: -8034451947.289372
[2025-10-19 04:04:46] 2025-10-19 08:03:39,693 | INFO     | current memory leak: 4.56 B/s (using 100 data points, chi2=0.00)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,693 | INFO     | could have reported an average CPU frequency of 2088 MHz (8 samples)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,693 | INFO     | ..............................
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . Timing measurements:
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . get job = 0 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . initial setup = 2 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . payload setup = 6 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . stage-in = 0 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . payload execution = 7955 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . stage-out = 0 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | . log creation = 0 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,694 | INFO     | ..............................
[2025-10-19 04:04:46] 2025-10-19 08:03:39,983 | INFO     | 
[2025-10-19 04:04:46] 2025-10-19 08:03:39,983 | INFO     | job summary report
[2025-10-19 04:04:46] 2025-10-19 08:03:39,983 | INFO     | --------------------------------------------------
[2025-10-19 04:04:46] 2025-10-19 08:03:39,984 | INFO     | PanDA job id: 6837875372
[2025-10-19 04:04:46] 2025-10-19 08:03:39,984 | INFO     | task id: 46676269
[2025-10-19 04:04:46] 2025-10-19 08:03:39,984 | INFO     | errors: (none)
[2025-10-19 04:04:46] 2025-10-19 08:03:39,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 04:04:46] 2025-10-19 08:03:39,984 | INFO     | pilot state: finished 
[2025-10-19 04:04:46] 2025-10-19 08:03:39,984 | INFO     | transexitcode: 0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | exeerrorcode: 0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | exeerrordiag: 
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | exitcode: 0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | exitmsg: OK
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | cpuconsumptiontime: 60761 s
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | nevents: 400
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | neventsw: 0
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | pid: 28126
[2025-10-19 04:04:46] 2025-10-19 08:03:39,985 | INFO     | pgrp: 28126
[2025-10-19 04:04:46] 2025-10-19 08:03:39,986 | INFO     | corecount: 8
[2025-10-19 04:04:46] 2025-10-19 08:03:39,986 | INFO     | event service: False
[2025-10-19 04:04:46] 2025-10-19 08:03:39,986 | INFO     | sizes: {0: 2348921, 1: 2348921, 5: 2349211, 11: 2349267, 7965: 2377004, 7966: 2386002, 7967: 2386186, 7972: 2386380}
[2025-10-19 04:04:46] 2025-10-19 08:03:39,986 | INFO     | --------------------------------------------------
[2025-10-19 04:04:46] 2025-10-19 08:03:39,986 | INFO     | 
[2025-10-19 04:04:46] 2025-10-19 08:03:39,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-19 04:04:46] 2025-10-19 08:03:40,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,009 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,011 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 04:04:46] 2025-10-19 08:03:40,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 04:04:46] 2025-10-19 08:03:40,012 | INFO     | job 6837875372 has completed (purged errors)
[2025-10-19 04:04:46] 2025-10-19 08:03:40,012 | INFO     | overall cleanup function is called
[2025-10-19 04:04:46] 2025-10-19 08:03:41,020 | INFO     | --- collectZombieJob: --- 10, [28126]
[2025-10-19 04:04:46] 2025-10-19 08:03:41,020 | INFO     | zombie collector waiting for pid 28126
[2025-10-19 04:04:46] 2025-10-19 08:03:41,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 04:04:46] 2025-10-19 08:03:41,020 | INFO     | collected zombie processes
[2025-10-19 04:04:46] 2025-10-19 08:03:41,021 | INFO     | will attempt to kill all subprocesses of pid=28126
[2025-10-19 04:04:46] 2025-10-19 08:03:41,119 | INFO     | process IDs to be killed: [28126] (in reverse order)
[2025-10-19 04:04:46] 2025-10-19 08:03:41,170 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 04:04:46] 2025-10-19 08:03:41,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 04:04:46] 2025-10-19 08:03:41,173 | INFO     | did not find any defunct processes belonging to 28126
[2025-10-19 04:04:46] 2025-10-19 08:03:41,176 | INFO     | did not find any defunct processes belonging to 28126
[2025-10-19 04:04:46] 2025-10-19 08:03:41,176 | INFO     | ready for new job
[2025-10-19 04:04:46] 2025-10-19 08:03:41,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 04:04:46] 2025-10-19 08:03:41,178 | INFO     | ***************************************
[2025-10-19 04:04:46] 2025-10-19 08:03:41,178 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 04:04:46] 2025-10-19 08:03:41,178 | INFO     | ***************************************
[2025-10-19 04:04:46] 2025-10-19 08:03:41,178 | INFO     | 
[2025-10-19 04:04:46] 2025-10-19 08:03:41,179 | INFO     | architecture information:
[2025-10-19 04:04:46] 2025-10-19 08:03:41,180 | INFO     | executing command: cat /etc/os-release
[2025-10-19 04:04:46] 2025-10-19 08:03:41,193 | INFO     | cat /etc/os-release:
[2025-10-19 04:04:46] NAME="CentOS Linux"
[2025-10-19 04:04:46] VERSION="7 (Core)"
[2025-10-19 04:04:46] ID="centos"
[2025-10-19 04:04:46] ID_LIKE="rhel fedora"
[2025-10-19 04:04:46] VERSION_ID="7"
[2025-10-19 04:04:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 04:04:46] ANSI_COLOR="0;31"
[2025-10-19 04:04:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 04:04:46] HOME_URL="https://www.centos.org/"
[2025-10-19 04:04:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 04:04:46] 
[2025-10-19 04:04:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 04:04:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 04:04:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 04:04:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 04:04:46] 
[2025-10-19 04:04:46] 2025-10-19 08:03:41,193 | INFO     | ***************************************
[2025-10-19 04:04:46] 2025-10-19 08:03:41,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-19 04:04:46] 2025-10-19 08:03:41,712 | INFO     | sufficient remaining disk space (29451354112 B)
[2025-10-19 04:04:46] 2025-10-19 08:03:41,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 04:04:46] 2025-10-19 08:03:41,712 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 04:04:46] 2025-10-19 08:03:41,712 | INFO     | update_server=False
[2025-10-19 04:04:46] 2025-10-19 08:03:41,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 04:04:46] 2025-10-19 08:03:41,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 04:04:46] 2025-10-19 08:03:41,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 04:04:46] 2025-10-19 08:03:41,726 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 04:04:46] 2025-10-19 08:03:41,726 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 04:04:46] 2025-10-19 08:03:41,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 04:04:46] 2025-10-19 08:03:41,727 | INFO     | will abort loop
[2025-10-19 04:04:46] 2025-10-19 08:03:41,759 | INFO     | all job control threads have been joined
[2025-10-19 04:04:46] 2025-10-19 08:03:42,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 04:04:46] 2025-10-19 08:03:42,471 | INFO     | all data control threads have been joined
[2025-10-19 04:04:46] 2025-10-19 08:03:42,480 | INFO     | all payload control threads have been joined
[2025-10-19 04:04:46] 2025-10-19 08:03:42,718 | INFO     | [job] retrieve thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,719 | INFO     | [data] copytool_in thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,719 | INFO     | [job] queue monitor thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,732 | INFO     | [job] job monitor thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,765 | INFO     | [job] control thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,771 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,813 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:42,833 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:43,296 | INFO     | [payload] failed_post thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:43,476 | INFO     | [data] control thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:43,486 | INFO     | [payload] control thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:43,959 | INFO     | [payload] validate_post thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:43,978 | INFO     | [job] validate thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:44,200 | INFO     | [data] copytool_out thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:45,719 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:03:52,058 | INFO     | job.realtimelogging is not enabled
[2025-10-19 04:04:46] 2025-10-19 08:03:53,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 04:04:46] 2025-10-19 08:04:12,358 | INFO     | PID=12849 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-19 04:04:46] 2025-10-19 08:04:12,359 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 04:04:46] 2025-10-19 08:04:12,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 04:04:46] 2025-10-19 08:04:12,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 04:04:46] 2025-10-19 08:04:40,955 | INFO     | [monitor] cgroup control has ended
[2025-10-19 04:04:46] 2025-10-19 08:04:41,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396836710208)>', '<ExcThread(monitor, started 140396021667584)>']
[2025-10-19 04:04:46] 2025-10-19 08:04:41,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 04:04:46] 2025-10-19 08:04:41,502 | INFO     | [monitor] control thread has ended
[2025-10-19 04:04:46] 2025-10-19 08:04:46,413 | INFO     | all workflow threads have been joined
[2025-10-19 04:04:46] 2025-10-19 08:04:46,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 04:04:46] 2025-10-19 08:04:46,419 | INFO     | traces error code: 0
[2025-10-19 04:04:46] 2025-10-19 08:04:46,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 04:04:46] 2025-10-19 08:04:46,522 [wrapper] ==== pilot stdout END ====
[2025-10-19 04:04:46] 2025-10-19 08:04:46,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 04:04:46] 2025-10-19 08:04:46,530 [wrapper] pilotpid: 12849
[2025-10-19 04:04:46] 2025-10-19 08:04:46,534 [wrapper] Pilot exit status: 0
[2025-10-19 04:04:46] 2025-10-19 08:04:46,548 [wrapper] pandaids: 6837875372
[2025-10-19 04:04:46] 2025-10-19 08:04:46,589 [wrapper] cleanup supervisor_pilot 10097 12850
[2025-10-19 04:04:46] 2025-10-19 08:04:46,593 [wrapper] Test setup, not cleaning
[2025-10-19 04:04:46] 2025-10-19 08:04:46,597 [wrapper] apfmon messages muted
[2025-10-19 04:04:46] 2025-10-19 08:04:46,601 [wrapper] ==== wrapper stdout END ====
[2025-10-19 04:04:46] 2025-10-19 08:04:46,605 [wrapper] ==== wrapper stderr END ====
[2025-10-19 04:04:46]  *** Error codes and diagnostics ***
[2025-10-19 04:04:46]     "exeErrorCode": 0,
[2025-10-19 04:04:46]     "exeErrorDiag": "",
[2025-10-19 04:04:46]     "pilotErrorCode": 0,
[2025-10-19 04:04:46]     "pilotErrorDiag": "",
[2025-10-19 04:04:46]  *** Listing of results directory ***
[2025-10-19 04:04:46] total 417952
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 20:00 pilot3.tar.gz
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 20:05 queuedata.json
[2025-10-19 04:04:46] -rwx------ 1 boincer umatlas     36292 Oct 10 20:06 runpilot2-wrapper.sh
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas       100 Oct 19 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 04:04:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 19 01:50 run_atlas
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas       105 Oct 19 01:50 job.xml
[2025-10-19 04:04:46] -rw-r--r-- 2 boincer umatlas 222577051 Oct 19 01:50 EVNT.46676267._001913.pool.root.1
[2025-10-19 04:04:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 01:50 start_atlas.sh
[2025-10-19 04:04:46] drwxrwx--x 2 boincer umatlas      4096 Oct 19 01:50 shared
[2025-10-19 04:04:46] -rw-r--r-- 2 boincer umatlas    569682 Oct 19 01:50 input.tar.gz
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas         0 Oct 19 01:50 boinc_lockfile
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 19 01:50 pandaJob.out
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas    976750 Oct 19 01:50 agis_schedconf.cvmfs.json
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas   1560740 Oct 19 01:50 agis_ddmendpoints.agis.ALL.json
[2025-10-19 04:04:46] drwx------ 5 boincer umatlas      4096 Oct 19 01:50 pilot3
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas      5949 Oct 19 04:01 init_data.xml
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas 198436374 Oct 19 04:03 HITS.46676269._047374.pool.root.1
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas       530 Oct 19 04:03 boinc_task_state.xml
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas      1050 Oct 19 04:03 memory_monitor_summary.json
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas    377239 Oct 19 04:03 log.46676269._047374.job.log.tgz.1
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas      7847 Oct 19 04:03 heartbeat.json
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas        95 Oct 19 04:04 pilot_heartbeat.json
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 19 04:04 boinc_mmap_file
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas        27 Oct 19 04:04 wrapper_checkpoint.txt
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas      5004 Oct 19 04:04 pilotlog.txt
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas   1154386 Oct 19 04:04 log.46676269._047374.job.log.1
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas       357 Oct 19 04:04 output.list
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas       620 Oct 19 04:04 runtime_log
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas   1546240 Oct 19 04:04 result.tar.gz
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas      8698 Oct 19 04:04 runtime_log.err
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas       658 Oct 19 04:04 1HyNDmyIcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcneNDmsl8oTn.diag
[2025-10-19 04:04:46] -rw-r--r-- 1 boincer umatlas     20861 Oct 19 04:04 stderr.txt
[2025-10-19 04:04:46] HITS file was successfully produced:
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas 198436374 Oct 19 04:03 shared/HITS.pool.root.1
[2025-10-19 04:04:46]  *** Contents of shared directory: ***
[2025-10-19 04:04:46] total 413248
[2025-10-19 04:04:46] -rw-r--r-- 2 boincer umatlas 222577051 Oct 19 01:50 ATLAS.root_0
[2025-10-19 04:04:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 19 01:50 start_atlas.sh
[2025-10-19 04:04:46] -rw-r--r-- 2 boincer umatlas    569682 Oct 19 01:50 input.tar.gz
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas 198436374 Oct 19 04:03 HITS.pool.root.1
[2025-10-19 04:04:46] -rw------- 1 boincer umatlas   1546240 Oct 19 04:04 result.tar.gz
04:04:48 (7333): run_atlas exited; CPU time 60840.511317
04:04:48 (7333): called boinc_finish(0)

</stderr_txt>
]]>

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