Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:42:56 (2024974): wrapper (7.7.26015): starting
22:42:56 (2024974): wrapper: running run_atlas (--nthreads 9)
[2025-10-18 22:42:56] Arguments: --nthreads 9
[2025-10-18 22:42:56] Threads: 9
[2025-10-18 22:42:56] Checking for CVMFS
[2025-10-18 22:42:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 22:42:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 22:42:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 22:42:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 22:42:57] 2.13.2.0 3951459 86893 635588 151872 1 423 30876319 32935936 46895 16776704 0 694108753 99.712 518482776 14781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 22:42:57] CVMFS is ok
[2025-10-18 22:42:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 22:42:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 22:42:57] Further information can be found at the LHC@home message board.
[2025-10-18 22:42:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 22:42:57] Checking for apptainer binary...
[2025-10-18 22:42:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 22:42:57] Running /usr/bin/apptainer --version
[2025-10-18 22:42:57] apptainer version 1.4.3-1.el9
[2025-10-18 22:42:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 22:42:58] c7-6-31.aglt2.org
[2025-10-18 22:42:58] apptainer works
[2025-10-18 22:42:58] Set ATHENA_PROC_NUMBER=9
[2025-10-18 22:42:58] Set ATHENA_CORE_NUMBER=9
[2025-10-18 22:42:58] Starting ATLAS job with PandaID=6837785138
[2025-10-18 22:42:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:20:11 (2024974): BOINC client no longer exists - exiting
23:20:11 (2024974): timer handler: client dead, exiting
23:29:34 (2195645): wrapper (7.7.26015): starting
23:29:34 (2195645): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 23:29:34] Arguments: --nthreads 8
[2025-10-18 23:29:34] Threads: 8
[2025-10-18 23:29:34] This job has been restarted, cleaning up previous attempt
[2025-10-18 23:29:34] Checking for CVMFS
[2025-10-18 23:29:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 23:29:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 23:29:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 23:29:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 23:29:35] 2.13.2.0 3951459 86940 627880 151874 2 17 31038080 32935936 41822 16776704 0 694279657 99.712 518485137 14781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 23:29:35] CVMFS is ok
[2025-10-18 23:29:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 23:29:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 23:29:35] Further information can be found at the LHC@home message board.
[2025-10-18 23:29:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 23:29:35] Checking for apptainer binary...
[2025-10-18 23:29:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 23:29:35] Running /usr/bin/apptainer --version
[2025-10-18 23:29:35] apptainer version 1.4.3-1.el9
[2025-10-18 23:29:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 23:29:35] c7-6-31.aglt2.org
[2025-10-18 23:29:35] apptainer works
[2025-10-18 23:29:35] Set ATHENA_PROC_NUMBER=8
[2025-10-18 23:29:35] Set ATHENA_CORE_NUMBER=8
[2025-10-18 23:29:35] Starting ATLAS job with PandaID=6837785138
[2025-10-18 23:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 02:33:20]  *** The last 200 lines of the pilot log: ***
[2025-10-19 02:33:20] 2025-10-19 06:32:25,787 | INFO     | monitor loop #736: job 0:6837785138 is in state 'finished'
[2025-10-19 02:33:20] 2025-10-19 06:32:25,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,074 | INFO     | time since job start (10952s) is within the limit (172800.0s)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,401 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 02:33:20] 2025-10-19 06:32:27,411 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3358.3794895833325
[2025-10-19 02:33:20] 2025-10-19 06:32:27,425 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837785138/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,426 | INFO     | extracted standard info from prmon json
[2025-10-19 02:33:20] 2025-10-19 06:32:27,426 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 02:33:20] 2025-10-19 06:32:27,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 02:33:20] 2025-10-19 06:32:27,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 02:33:20] 2025-10-19 06:32:27,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 02:33:20] 2025-10-19 06:32:27,428 | INFO     | fitting pss+swap vs Time
[2025-10-19 02:33:20] 2025-10-19 06:32:27,429 | INFO     | sum of square deviations: 1778404271.6201165
[2025-10-19 02:33:20] 2025-10-19 06:32:27,429 | INFO     | sum of deviations: 13347827738.396664
[2025-10-19 02:33:20] 2025-10-19 06:32:27,429 | INFO     | mean x: 1760850070.1564245
[2025-10-19 02:33:20] 2025-10-19 06:32:27,429 | INFO     | mean y: 2160000.3072625697
[2025-10-19 02:33:20] 2025-10-19 06:32:27,430 | INFO     | -- intersect: -13213914536.09725
[2025-10-19 02:33:20] 2025-10-19 06:32:27,430 | INFO     | intersect: -13213914536.09725
[2025-10-19 02:33:20] 2025-10-19 06:32:27,430 | INFO     | chi2: 1.7345238141143058
[2025-10-19 02:33:20] 2025-10-19 06:32:27,430 | INFO     | sum of square deviations: 1633507768.994261
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | sum of deviations: 12704184511.408031
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | mean x: 1760849917.6609194
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | mean y: 2159331.074712644
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | -- intersect: -13692395831.423906
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | intersect: -13692395831.423906
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | chi2: 1.7343008523224637
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | current chi2=1.7343008523224637 (change=0.012854351726266939 %)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,431 | INFO     | right removable region: 173
[2025-10-19 02:33:20] 2025-10-19 06:32:27,432 | INFO     | sum of square deviations: 1633490688.994261
[2025-10-19 02:33:20] 2025-10-19 06:32:27,432 | INFO     | sum of deviations: -12968668780.603453
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | mean x: 1760850222.6609194
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | mean y: 2187409.396551724
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | -- intersect: 13981993638.963333
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | intersect: 13981993638.963333
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | chi2: 0.16407620494244685
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | current chi2=0.16407620494244685 (change=90.54056199129047 %)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,433 | INFO     | sum of square deviations: 1496681138.686398
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | sum of deviations: -14498245696.85207
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | mean x: 1760850375.1597633
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | mean y: 2189087.698224852
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | -- intersect: 17059423734.796679
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | intersect: 17059423734.796679
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | chi2: 0.1474077609241882
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | current chi2=0.1474077609241882 (change=10.158964868858012 %)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,434 | INFO     | left removable region: 20
[2025-10-19 02:33:20] 2025-10-19 06:32:27,435 | INFO     | sum of square deviations: 1110563825.581702
[2025-10-19 02:33:20] 2025-10-19 06:32:27,435 | INFO     | sum of deviations: -10270890425.732027
[2025-10-19 02:33:20] 2025-10-19 06:32:27,435 | INFO     | mean x: 1760850497.1699347
[2025-10-19 02:33:20] 2025-10-19 06:32:27,435 | INFO     | mean y: 2184175.797385621
[2025-10-19 02:33:20] 2025-10-19 06:32:27,435 | INFO     | -- intersect: 16287157714.400772
[2025-10-19 02:33:20] 2025-10-19 06:32:27,435 | INFO     | intersect: 16287157714.400772
[2025-10-19 02:33:20] 2025-10-19 06:32:27,436 | INFO     | chi2: 0.13468922930877464
[2025-10-19 02:33:20] 2025-10-19 06:32:27,436 | INFO     | -- intersect: 16287157714.400772
[2025-10-19 02:33:20] 2025-10-19 06:32:27,436 | INFO     | current memory leak: -9.25 B/s (using 153 data points, chi2=0.13)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,436 | INFO     | could have reported an average CPU frequency of 3352 MHz (10 samples)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,436 | INFO     | ..............................
[2025-10-19 02:33:20] 2025-10-19 06:32:27,436 | INFO     | . Timing measurements:
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . get job = 0 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . initial setup = 1 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . payload setup = 12 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . stage-in = 0 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . payload execution = 10906 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . stage-out = 2 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | . log creation = 0 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,437 | INFO     | ..............................
[2025-10-19 02:33:20] 2025-10-19 06:32:27,493 | INFO     | 
[2025-10-19 02:33:20] 2025-10-19 06:32:27,493 | INFO     | job summary report
[2025-10-19 02:33:20] 2025-10-19 06:32:27,493 | INFO     | --------------------------------------------------
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | PanDA job id: 6837785138
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | task id: 46676269
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | errors: (none)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | pilot state: finished 
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | transexitcode: 0
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | exeerrorcode: 0
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | exeerrordiag: 
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | exitcode: 0
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | exitmsg: OK
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | cpuconsumptiontime: 30402 s
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | nevents: 400
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | neventsw: 0
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | pid: 2227935
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | pgrp: 2227935
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | corecount: 8
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | event service: False
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | sizes: {0: 2348921, 10: 2349183, 11: 2349211, 10922: 2378678, 10924: 2387676, 10926: 2387732, 10931: 2388054}
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | --------------------------------------------------
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | 
[2025-10-19 02:33:20] 2025-10-19 06:32:27,494 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-19 02:33:20] 2025-10-19 06:32:27,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | job 6837785138 has completed (purged errors)
[2025-10-19 02:33:20] 2025-10-19 06:32:27,510 | INFO     | overall cleanup function is called
[2025-10-19 02:33:20] 2025-10-19 06:32:28,516 | INFO     | --- collectZombieJob: --- 10, [2227935]
[2025-10-19 02:33:20] 2025-10-19 06:32:28,517 | INFO     | zombie collector waiting for pid 2227935
[2025-10-19 02:33:20] 2025-10-19 06:32:28,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 02:33:20] 2025-10-19 06:32:28,517 | INFO     | collected zombie processes
[2025-10-19 02:33:20] 2025-10-19 06:32:28,517 | INFO     | will attempt to kill all subprocesses of pid=2227935
[2025-10-19 02:33:20] 2025-10-19 06:32:28,962 | INFO     | process IDs to be killed: [2227935] (in reverse order)
[2025-10-19 02:33:20] 2025-10-19 06:32:29,115 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 02:33:20] 2025-10-19 06:32:29,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 02:33:20] 2025-10-19 06:32:29,135 | INFO     | did not find any defunct processes belonging to 2227935
[2025-10-19 02:33:20] 2025-10-19 06:32:29,155 | INFO     | did not find any defunct processes belonging to 2227935
[2025-10-19 02:33:20] 2025-10-19 06:32:29,156 | INFO     | ready for new job
[2025-10-19 02:33:20] 2025-10-19 06:32:29,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 02:33:20] 2025-10-19 06:32:29,157 | INFO     | ***************************************
[2025-10-19 02:33:20] 2025-10-19 06:32:29,158 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-19 02:33:20] 2025-10-19 06:32:29,158 | INFO     | ***************************************
[2025-10-19 02:33:20] 2025-10-19 06:32:29,158 | INFO     | 
[2025-10-19 02:33:20] 2025-10-19 06:32:29,176 | INFO     | architecture information:
[2025-10-19 02:33:20] 2025-10-19 06:32:29,176 | INFO     | executing command: cat /etc/os-release
[2025-10-19 02:33:20] 2025-10-19 06:32:29,192 | INFO     | cat /etc/os-release:
[2025-10-19 02:33:20] NAME="CentOS Linux"
[2025-10-19 02:33:20] VERSION="7 (Core)"
[2025-10-19 02:33:20] ID="centos"
[2025-10-19 02:33:20] ID_LIKE="rhel fedora"
[2025-10-19 02:33:20] VERSION_ID="7"
[2025-10-19 02:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 02:33:20] ANSI_COLOR="0;31"
[2025-10-19 02:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 02:33:20] HOME_URL="https://www.centos.org/"
[2025-10-19 02:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 02:33:20] 
[2025-10-19 02:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 02:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 02:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 02:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 02:33:20] 
[2025-10-19 02:33:20] 2025-10-19 06:32:29,193 | INFO     | ***************************************
[2025-10-19 02:33:20] 2025-10-19 06:32:29,695 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-19 02:33:20] 2025-10-19 06:32:29,708 | INFO     | sufficient remaining disk space (76152832000 B)
[2025-10-19 02:33:20] 2025-10-19 06:32:29,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 02:33:20] 2025-10-19 06:32:29,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 02:33:20] 2025-10-19 06:32:29,709 | INFO     | update_server=False
[2025-10-19 02:33:20] 2025-10-19 06:32:29,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 02:33:20] 2025-10-19 06:32:29,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 02:33:20] 2025-10-19 06:32:29,710 | INFO     | aborting loop
[2025-10-19 02:33:20] 2025-10-19 06:32:30,207 | INFO     | all payload control threads have been joined
[2025-10-19 02:33:20] 2025-10-19 06:32:30,388 | INFO     | all data control threads have been joined
[2025-10-19 02:33:20] 2025-10-19 06:32:30,608 | INFO     | all job control threads have been joined
[2025-10-19 02:33:20] 2025-10-19 06:32:30,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 02:33:20] 2025-10-19 06:32:30,714 | INFO     | [job] retrieve thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:30,715 | INFO     | [job] job monitor thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:30,973 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,000 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,005 | INFO     | [job] validate thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,213 | INFO     | [payload] control thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,393 | INFO     | [data] control thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,530 | INFO     | [payload] failed_post thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,559 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,614 | INFO     | [job] control thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:31,859 | INFO     | [payload] validate_post thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:32,006 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:32,018 | INFO     | [data] copytool_in thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:32,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 02:33:20] 2025-10-19 06:32:32,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 02:33:20] 2025-10-19 06:32:32,653 | INFO     | [data] copytool_out thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:33,507 | INFO     | [job] queue monitor thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:32:36,351 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 02:33:20] 2025-10-19 06:33:00,667 | INFO     | PID=2206889 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 02:33:20] 2025-10-19 06:33:00,668 | INFO     | .. there are 39 such processes running
[2025-10-19 02:33:20] 2025-10-19 06:33:00,668 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 02:33:20] 2025-10-19 06:33:00,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 02:33:20] 2025-10-19 06:33:00,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 02:33:20] 2025-10-19 06:33:13,783 | INFO     | [monitor] cgroup control has ended
[2025-10-19 02:33:20] 2025-10-19 06:33:15,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971870422848)>', '<ExcThread(monitor, started 139971524531968)>']
[2025-10-19 02:33:20] 2025-10-19 06:33:15,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 02:33:20] 2025-10-19 06:33:15,742 | INFO     | [monitor] control thread has ended
[2025-10-19 02:33:20] 2025-10-19 06:33:20,521 | INFO     | all workflow threads have been joined
[2025-10-19 02:33:20] 2025-10-19 06:33:20,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 02:33:20] 2025-10-19 06:33:20,522 | INFO     | traces error code: 0
[2025-10-19 02:33:20] 2025-10-19 06:33:20,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 02:33:20] 2025-10-19 06:33:20,658 [wrapper] ==== pilot stdout END ====
[2025-10-19 02:33:20] 2025-10-19 06:33:20,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 02:33:20] 2025-10-19 06:33:20,665 [wrapper] pilotpid: 2206889
[2025-10-19 02:33:20] 2025-10-19 06:33:20,668 [wrapper] Pilot exit status: 0
[2025-10-19 02:33:20] 2025-10-19 06:33:20,678 [wrapper] pandaids: 6837785138 6837785138
[2025-10-19 02:33:20] 2025-10-19 06:33:20,786 [wrapper] cleanup supervisor_pilot 3617503 2206890
[2025-10-19 02:33:20] 2025-10-19 06:33:20,789 [wrapper] Test setup, not cleaning
[2025-10-19 02:33:20] 2025-10-19 06:33:20,792 [wrapper] apfmon messages muted
[2025-10-19 02:33:20] 2025-10-19 06:33:20,795 [wrapper] ==== wrapper stdout END ====
[2025-10-19 02:33:20] 2025-10-19 06:33:20,797 [wrapper] ==== wrapper stderr END ====
[2025-10-19 02:33:20]  *** Error codes and diagnostics ***
[2025-10-19 02:33:20]     "exeErrorCode": 0,
[2025-10-19 02:33:20]     "exeErrorDiag": "",
[2025-10-19 02:33:20]     "pilotErrorCode": 0,
[2025-10-19 02:33:20]     "pilotErrorDiag": "",
[2025-10-19 02:33:20]  *** Listing of results directory ***
[2025-10-19 02:33:20] total 636524
[2025-10-19 02:33:20] drwx------. 4 boincer umatlas      4096 Jul 31 08:57 pilot3
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-19 02:33:20] -rwx------. 1 boincer umatlas     36292 Oct 10 16:47 runpilot2-wrapper.sh
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:47 queuedata.json
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas       100 Oct 18 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 02:33:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 22:42 run_atlas
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas       105 Oct 18 22:42 job.xml
[2025-10-19 02:33:20] -rw-r--r--. 3 boincer umatlas 223287934 Oct 18 22:42 EVNT.46676267._001819.pool.root.1
[2025-10-19 02:33:20] -rw-r--r--. 3 boincer umatlas 223287934 Oct 18 22:42 ATLAS.root_0
[2025-10-19 02:33:20] -rw-r--r--. 2 boincer umatlas    576703 Oct 18 22:42 input.tar.gz
[2025-10-19 02:33:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 22:42 start_atlas.sh
[2025-10-19 02:33:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 22:42 shared
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas         0 Oct 18 22:42 boinc_lockfile
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 18 23:29 pandaJob.out
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas    976750 Oct 18 23:29 agis_schedconf.cvmfs.json
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas      6934 Oct 19 02:29 init_data.xml
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas       530 Oct 19 02:31 boinc_task_state.xml
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas 197515447 Oct 19 02:31 HITS.46676269._044969.pool.root.1
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas        96 Oct 19 02:32 pilot_heartbeat.json
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas      1048 Oct 19 02:32 memory_monitor_summary.json
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas   1560740 Oct 19 02:32 agis_ddmendpoints.agis.ALL.json
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas    412226 Oct 19 02:32 log.46676269._044969.job.log.tgz.1
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas      7803 Oct 19 02:32 heartbeat.json
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 19 02:33 boinc_mmap_file
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas        28 Oct 19 02:33 wrapper_checkpoint.txt
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas      4824 Oct 19 02:33 pilotlog.txt
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas   1488184 Oct 19 02:33 log.46676269._044969.job.log.1
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas       357 Oct 19 02:33 output.list
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas       620 Oct 19 02:33 runtime_log
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas   1914880 Oct 19 02:33 result.tar.gz
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas      8784 Oct 19 02:33 runtime_log.err
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas       782 Oct 19 02:33 qHtMDmsCZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRZQMDmNFUkcm.diag
[2025-10-19 02:33:20] -rw-r--r--. 1 boincer umatlas     23495 Oct 19 02:33 stderr.txt
[2025-10-19 02:33:20] HITS file was successfully produced:
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas 197515447 Oct 19 02:31 shared/HITS.pool.root.1
[2025-10-19 02:33:20]  *** Contents of shared directory: ***
[2025-10-19 02:33:20] total 413400
[2025-10-19 02:33:20] -rw-r--r--. 3 boincer umatlas 223287934 Oct 18 22:42 ATLAS.root_0
[2025-10-19 02:33:20] -rw-r--r--. 2 boincer umatlas    576703 Oct 18 22:42 input.tar.gz
[2025-10-19 02:33:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 22:42 start_atlas.sh
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas 197515447 Oct 19 02:31 HITS.pool.root.1
[2025-10-19 02:33:20] -rw-------. 1 boincer umatlas   1914880 Oct 19 02:33 result.tar.gz
02:33:22 (2195645): run_atlas exited; CPU time 30887.966376
02:33:22 (2195645): called boinc_finish(0)

</stderr_txt>
]]>

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