Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:33:28 (1105873): wrapper (7.7.26015): starting
22:33:28 (1105873): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 22:33:28] Arguments: --nthreads 8
[2025-10-18 22:33:28] Threads: 8
[2025-10-18 22:33:28] Checking for CVMFS
[2025-10-18 22:33:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 22:33:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 22:33:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 22:33:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 22:33:30] 2.13.2.0 3821245 138747 296848 151872 3 212 14439819 21042177 17619 16776704 0 122852880 99.450 176682409 30350 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 22:33:30] CVMFS is ok
[2025-10-18 22:33:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 22:33:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 22:33:30] Further information can be found at the LHC@home message board.
[2025-10-18 22:33:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 22:33:30] Checking for apptainer binary...
[2025-10-18 22:33:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 22:33:30] Running /usr/bin/apptainer --version
[2025-10-18 22:33:30] apptainer version 1.4.2-1.el9
[2025-10-18 22:33:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 22:33:30] c-6-1.aglt2.org
[2025-10-18 22:33:30] apptainer works
[2025-10-18 22:33:30] Set ATHENA_PROC_NUMBER=8
[2025-10-18 22:33:30] Set ATHENA_CORE_NUMBER=8
[2025-10-18 22:33:30] Starting ATLAS job with PandaID=6848037387
[2025-10-18 22:33:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 05:34:17]  *** The last 200 lines of the pilot log: ***
[2025-10-19 05:34:17] 2025-10-19 09:33:12,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:34:17] 2025-10-19 09:33:12,898 | INFO     | fitting pss+swap vs Time
[2025-10-19 05:34:17] 2025-10-19 09:33:12,915 | INFO     | sum of square deviations: 21371498917.551212
[2025-10-19 05:34:17] 2025-10-19 09:33:12,959 | INFO     | sum of deviations: -126326772649.76576
[2025-10-19 05:34:17] 2025-10-19 09:33:12,978 | INFO     | mean x: 1760853822.2634146
[2025-10-19 05:34:17] 2025-10-19 09:33:12,978 | INFO     | mean y: 2425812.275609756
[2025-10-19 05:34:17] 2025-10-19 09:33:12,978 | INFO     | -- intersect: 10410819782.801538
[2025-10-19 05:34:17] 2025-10-19 09:33:12,978 | INFO     | intersect: 10410819782.801538
[2025-10-19 05:34:17] 2025-10-19 09:33:12,979 | INFO     | chi2: 4.070973090551053
[2025-10-19 05:34:17] 2025-10-19 09:33:12,980 | INFO     | sum of square deviations: 20599193067.6447
[2025-10-19 05:34:17] 2025-10-19 09:33:13,019 | INFO     | sum of deviations: -69928091337.97775
[2025-10-19 05:34:17] 2025-10-19 09:33:13,019 | INFO     | mean x: 1760853669.7703705
[2025-10-19 05:34:17] 2025-10-19 09:33:13,019 | INFO     | mean y: 2436875.451851852
[2025-10-19 05:34:17] 2025-10-19 09:33:13,020 | INFO     | -- intersect: 5980007736.997972
[2025-10-19 05:34:17] 2025-10-19 09:33:13,020 | INFO     | intersect: 5980007736.997972
[2025-10-19 05:34:17] 2025-10-19 09:33:13,020 | INFO     | chi2: 2.5490526815350947
[2025-10-19 05:34:17] 2025-10-19 09:33:13,077 | INFO     | current chi2=2.5490526815350947 (change=37.38468359195047 %)
[2025-10-19 05:34:17] 2025-10-19 09:33:13,078 | INFO     | sum of square deviations: 19845501213.990078
[2025-10-19 05:34:17] 2025-10-19 09:33:13,135 | INFO     | sum of deviations: -67548920777.47998
[2025-10-19 05:34:17] 2025-10-19 09:33:13,135 | INFO     | mean x: 1760853517.255
[2025-10-19 05:34:17] 2025-10-19 09:33:13,135 | INFO     | mean y: 2437355.74
[2025-10-19 05:34:17] 2025-10-19 09:33:13,135 | INFO     | -- intersect: 5995924416.371939
[2025-10-19 05:34:17] 2025-10-19 09:33:13,136 | INFO     | intersect: 5995924416.371939
[2025-10-19 05:34:17] 2025-10-19 09:33:13,136 | INFO     | chi2: 2.5480633712919833
[2025-10-19 05:34:17] 2025-10-19 09:33:13,137 | INFO     | current chi2=2.5480633712919833 (change=0.03881089827125683 %)
[2025-10-19 05:34:17] 2025-10-19 09:33:13,137 | INFO     | right removable region: 399
[2025-10-19 05:34:17] 2025-10-19 09:33:13,137 | INFO     | sum of square deviations: 20598926004.87903
[2025-10-19 05:34:17] 2025-10-19 09:33:13,234 | INFO     | sum of deviations: -204602447141.0888
[2025-10-19 05:34:17] 2025-10-19 09:33:13,235 | INFO     | mean x: 1760853974.782716
[2025-10-19 05:34:17] 2025-10-19 09:33:13,235 | INFO     | mean y: 2441201.0444444446
[2025-10-19 05:34:17] 2025-10-19 09:33:13,235 | INFO     | -- intersect: 17492432291.51793
[2025-10-19 05:34:17] 2025-10-19 09:33:13,235 | INFO     | intersect: 17492432291.51793
[2025-10-19 05:34:17] 2025-10-19 09:33:13,236 | INFO     | chi2: 2.1319842197731127
[2025-10-19 05:34:17] 2025-10-19 09:33:13,236 | INFO     | current chi2=2.1319842197731127 (change=47.62961649828729 %)
[2025-10-19 05:34:17] 2025-10-19 09:33:13,237 | INFO     | sum of square deviations: 19845190532.397503
[2025-10-19 05:34:17] 2025-10-19 09:33:13,274 | INFO     | sum of deviations: -204562587570.68735
[2025-10-19 05:34:17] 2025-10-19 09:33:13,325 | INFO     | mean x: 1760854127.3025
[2025-10-19 05:34:17] 2025-10-19 09:33:13,325 | INFO     | mean y: 2441179.1875
[2025-10-19 05:34:17] 2025-10-19 09:33:13,325 | INFO     | -- intersect: 18153180323.137024
[2025-10-19 05:34:17] 2025-10-19 09:33:13,325 | INFO     | intersect: 18153180323.137024
[2025-10-19 05:34:17] 2025-10-19 09:33:13,326 | INFO     | chi2: 2.1018791511595127
[2025-10-19 05:34:17] 2025-10-19 09:33:13,326 | INFO     | current chi2=2.1018791511595127 (change=1.4120680788530304 %)
[2025-10-19 05:34:17] 2025-10-19 09:33:13,326 | INFO     | left removable region: 20
[2025-10-19 05:34:17] 2025-10-19 09:33:13,327 | INFO     | sum of square deviations: 16880423659.799574
[2025-10-19 05:34:17] 2025-10-19 09:33:13,397 | INFO     | sum of deviations: -108281220780.98425
[2025-10-19 05:34:17] 2025-10-19 09:33:13,397 | INFO     | mean x: 1760854096.8205805
[2025-10-19 05:34:17] 2025-10-19 09:33:13,397 | INFO     | mean y: 2445294.382585752
[2025-10-19 05:34:17] 2025-10-19 09:33:13,397 | INFO     | -- intersect: 11297625739.112831
[2025-10-19 05:34:17] 2025-10-19 09:33:13,397 | INFO     | intersect: 11297625739.112831
[2025-10-19 05:34:17] 2025-10-19 09:33:13,398 | INFO     | chi2: 0.4685165540589519
[2025-10-19 05:34:17] 2025-10-19 09:33:13,398 | INFO     | -- intersect: 11297625739.112831
[2025-10-19 05:34:17] 2025-10-19 09:33:13,398 | INFO     | current memory leak: -6.41 B/s (using 379 data points, chi2=0.47)
[2025-10-19 05:34:17] 2025-10-19 09:33:13,444 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | ..............................
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . Timing measurements:
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . get job = 0 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . initial setup = 6 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . payload setup = 24 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . stage-in = 0 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . payload execution = 25001 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . stage-out = 9 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,445 | INFO     | . log creation = 2 s
[2025-10-19 05:34:17] 2025-10-19 09:33:13,446 | INFO     | ..............................
[2025-10-19 05:34:17] 2025-10-19 09:33:14,570 | INFO     | time since job start (25134s) is within the limit (172800.0s)
[2025-10-19 05:34:17] 2025-10-19 09:33:15,380 | INFO     | 
[2025-10-19 05:34:17] 2025-10-19 09:33:15,380 | INFO     | job summary report
[2025-10-19 05:34:17] 2025-10-19 09:33:15,380 | INFO     | --------------------------------------------------
[2025-10-19 05:34:17] 2025-10-19 09:33:15,405 | INFO     | PanDA job id: 6848037387
[2025-10-19 05:34:17] 2025-10-19 09:33:15,405 | INFO     | task id: 46771637
[2025-10-19 05:34:17] 2025-10-19 09:33:15,405 | INFO     | errors: (none)
[2025-10-19 05:34:17] 2025-10-19 09:33:15,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 05:34:17] 2025-10-19 09:33:15,405 | INFO     | pilot state: finished 
[2025-10-19 05:34:17] 2025-10-19 09:33:15,405 | INFO     | transexitcode: 0
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | exeerrorcode: 0
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | exeerrordiag: 
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | exitcode: 0
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | exitmsg: OK
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | cpuconsumptiontime: 56615 s
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | nevents: 400
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | neventsw: 0
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | pid: 1121215
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | pgrp: 1121215
[2025-10-19 05:34:17] 2025-10-19 09:33:15,406 | INFO     | corecount: 8
[2025-10-19 05:34:17] 2025-10-19 09:33:15,407 | INFO     | event service: False
[2025-10-19 05:34:17] 2025-10-19 09:33:15,407 | INFO     | sizes: {0: 2348758, 1: 2348957, 2: 2348957, 13: 2348985, 18: 2349303, 23: 2349331, 25030: 2384617, 25031: 2384616, 25042: 2393670, 25043: 2393726, 25092: 2393984}
[2025-10-19 05:34:17] 2025-10-19 09:33:15,407 | INFO     | --------------------------------------------------
[2025-10-19 05:34:17] 2025-10-19 09:33:15,407 | INFO     | 
[2025-10-19 05:34:17] 2025-10-19 09:33:15,407 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-19 05:34:17] 2025-10-19 09:33:15,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 05:34:17] 2025-10-19 09:33:15,741 | INFO     | job 6848037387 has completed (purged errors)
[2025-10-19 05:34:17] 2025-10-19 09:33:15,741 | INFO     | overall cleanup function is called
[2025-10-19 05:34:17] 2025-10-19 09:33:16,801 | INFO     | --- collectZombieJob: --- 10, [1121215]
[2025-10-19 05:34:17] 2025-10-19 09:33:16,801 | INFO     | zombie collector waiting for pid 1121215
[2025-10-19 05:34:17] 2025-10-19 09:33:16,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 05:34:17] 2025-10-19 09:33:16,801 | INFO     | collected zombie processes
[2025-10-19 05:34:17] 2025-10-19 09:33:16,801 | INFO     | will attempt to kill all subprocesses of pid=1121215
[2025-10-19 05:34:17] 2025-10-19 09:33:18,897 | INFO     | process IDs to be killed: [1121215] (in reverse order)
[2025-10-19 05:34:17] 2025-10-19 09:33:19,901 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 05:34:17] 2025-10-19 09:33:19,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 05:34:17] 2025-10-19 09:33:19,962 | INFO     | did not find any defunct processes belonging to 1121215
[2025-10-19 05:34:17] 2025-10-19 09:33:19,996 | INFO     | did not find any defunct processes belonging to 1121215
[2025-10-19 05:34:17] 2025-10-19 09:33:19,997 | INFO     | ready for new job
[2025-10-19 05:34:17] 2025-10-19 09:33:19,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 05:34:17] 2025-10-19 09:33:20,052 | INFO     | ***************************************
[2025-10-19 05:34:17] 2025-10-19 09:33:20,055 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 05:34:17] 2025-10-19 09:33:20,055 | INFO     | ***************************************
[2025-10-19 05:34:17] 2025-10-19 09:33:20,055 | INFO     | 
[2025-10-19 05:34:17] 2025-10-19 09:33:20,070 | INFO     | architecture information:
[2025-10-19 05:34:17] 2025-10-19 09:33:20,074 | INFO     | executing command: cat /etc/os-release
[2025-10-19 05:34:17] 2025-10-19 09:33:20,294 | INFO     | cat /etc/os-release:
[2025-10-19 05:34:17] NAME="CentOS Linux"
[2025-10-19 05:34:17] VERSION="7 (Core)"
[2025-10-19 05:34:17] ID="centos"
[2025-10-19 05:34:17] ID_LIKE="rhel fedora"
[2025-10-19 05:34:17] VERSION_ID="7"
[2025-10-19 05:34:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 05:34:17] ANSI_COLOR="0;31"
[2025-10-19 05:34:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 05:34:17] HOME_URL="https://www.centos.org/"
[2025-10-19 05:34:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 05:34:17] 
[2025-10-19 05:34:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 05:34:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 05:34:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 05:34:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 05:34:17] 
[2025-10-19 05:34:17] 2025-10-19 09:33:20,294 | INFO     | ***************************************
[2025-10-19 05:34:17] 2025-10-19 09:33:20,798 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-19 05:34:17] 2025-10-19 09:33:20,965 | INFO     | sufficient remaining disk space (53256126464 B)
[2025-10-19 05:34:17] 2025-10-19 09:33:20,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 05:34:17] 2025-10-19 09:33:20,997 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 05:34:17] 2025-10-19 09:33:20,997 | INFO     | update_server=False
[2025-10-19 05:34:17] 2025-10-19 09:33:20,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 05:34:17] 2025-10-19 09:33:21,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 05:34:17] 2025-10-19 09:33:21,420 | INFO     | all data control threads have been joined
[2025-10-19 05:34:17] 2025-10-19 09:33:21,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:34:17] 2025-10-19 09:33:21,479 | INFO     | aborting loop
[2025-10-19 05:34:17] 2025-10-19 09:33:21,618 | INFO     | all job control threads have been joined
[2025-10-19 05:34:17] 2025-10-19 09:33:22,013 | INFO     | [job] retrieve thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,075 | INFO     | [data] copytool_in thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,077 | INFO     | [job] validate thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,133 | INFO     | all payload control threads have been joined
[2025-10-19 05:34:17] 2025-10-19 09:33:22,427 | INFO     | [data] control thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,488 | INFO     | [job] job monitor thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 05:34:17] 2025-10-19 09:33:22,639 | INFO     | [job] control thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,665 | INFO     | [payload] failed_post thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:22,678 | INFO     | [payload] validate_post thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,032 | INFO     | [data] copytool_out thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,139 | INFO     | [payload] control thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,471 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,471 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,482 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:23,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:34:17] 2025-10-19 09:33:24,970 | INFO     | [job] queue monitor thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:26,568 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 05:34:17] 2025-10-19 09:33:53,642 | INFO     | PID=1112399 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 05:34:17] 2025-10-19 09:33:53,693 | INFO     | .. there are 20 such processes running
[2025-10-19 05:34:17] 2025-10-19 09:33:53,720 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 05:34:17] 2025-10-19 09:33:53,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 05:34:17] 2025-10-19 09:33:53,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 05:34:17] 2025-10-19 09:34:08,373 | INFO     | [monitor] cgroup control has ended
[2025-10-19 05:34:17] 2025-10-19 09:34:08,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436196935488)>', '<ExcThread(monitor, started 140435414570752)>']
[2025-10-19 05:34:17] 2025-10-19 09:34:08,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 05:34:17] 2025-10-19 09:34:08,820 | INFO     | [monitor] control thread has ended
[2025-10-19 05:34:17] 2025-10-19 09:34:13,662 | INFO     | all workflow threads have been joined
[2025-10-19 05:34:17] 2025-10-19 09:34:13,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 05:34:17] 2025-10-19 09:34:13,662 | INFO     | traces error code: 0
[2025-10-19 05:34:17] 2025-10-19 09:34:13,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 05:34:17] 2025-10-19 09:34:15,532 [wrapper] supervise_pilot (15 min periods counter: 29)
[2025-10-19 05:34:17] 2025-10-19 09:34:15,935 [wrapper] ==== pilot stdout END ====
[2025-10-19 05:34:17] 2025-10-19 09:34:15,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 05:34:17] 2025-10-19 09:34:16,034 [wrapper] pilotpid: 1112399
[2025-10-19 05:34:17] 2025-10-19 09:34:16,090 [wrapper] Pilot exit status: 0
[2025-10-19 05:34:17] 2025-10-19 09:34:16,288 [wrapper] pandaids: 6848037387
[2025-10-19 05:34:17] 2025-10-19 09:34:17,034 [wrapper] cleanup supervisor_pilot 2102005 1112400
[2025-10-19 05:34:17] 2025-10-19 09:34:17,067 [wrapper] Test setup, not cleaning
[2025-10-19 05:34:17] 2025-10-19 09:34:17,139 [wrapper] apfmon messages muted
[2025-10-19 05:34:17] 2025-10-19 09:34:17,169 [wrapper] ==== wrapper stdout END ====
[2025-10-19 05:34:17] 2025-10-19 09:34:17,179 [wrapper] ==== wrapper stderr END ====
[2025-10-19 05:34:17]  *** Error codes and diagnostics ***
[2025-10-19 05:34:17]     "exeErrorCode": 0,
[2025-10-19 05:34:17]     "exeErrorDiag": "",
[2025-10-19 05:34:17]     "pilotErrorCode": 0,
[2025-10-19 05:34:17]     "pilotErrorDiag": "",
[2025-10-19 05:34:17]  *** Listing of results directory ***
[2025-10-19 05:34:17] total 437044
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 18 09:39 pilot3.tar.gz
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 18 10:22 queuedata.json
[2025-10-19 05:34:17] -rwx------. 1 boincer umatlas     36292 Oct 18 10:23 runpilot2-wrapper.sh
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas       100 Oct 18 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 05:34:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 22:33 run_atlas
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas       105 Oct 18 22:33 job.xml
[2025-10-19 05:34:17] -rw-r--r--. 2 boincer umatlas 229331320 Oct 18 22:33 EVNT.46771634._001852.pool.root.1
[2025-10-19 05:34:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 22:33 start_atlas.sh
[2025-10-19 05:34:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 22:33 shared
[2025-10-19 05:34:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 18 22:33 input.tar.gz
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas         0 Oct 18 22:33 boinc_lockfile
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas      2558 Oct 18 22:33 pandaJob.out
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas    976742 Oct 18 22:34 agis_schedconf.cvmfs.json
[2025-10-19 05:34:17] drwx------. 5 boincer umatlas      4096 Oct 18 22:34 pilot3
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas 207120898 Oct 19 05:30 HITS.46771637._043895.pool.root.1
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas      6657 Oct 19 05:30 init_data.xml
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas       531 Oct 19 05:30 boinc_task_state.xml
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas      1039 Oct 19 05:32 memory_monitor_summary.json
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas   1560740 Oct 19 05:32 agis_ddmendpoints.agis.ALL.json
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas    574988 Oct 19 05:32 log.46771637._043895.job.log.tgz.1
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas      7820 Oct 19 05:33 heartbeat.json
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas        95 Oct 19 05:33 pilot_heartbeat.json
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 19 05:34 boinc_mmap_file
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas        28 Oct 19 05:34 wrapper_checkpoint.txt
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas      4824 Oct 19 05:34 pilotlog.txt
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas   3011878 Oct 19 05:34 log.46771637._043895.job.log.1
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas       357 Oct 19 05:34 output.list
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas       620 Oct 19 05:34 runtime_log
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas   3604480 Oct 19 05:34 result.tar.gz
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas      8689 Oct 19 05:34 runtime_log.err
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas       656 Oct 19 05:34 LRXNDmV1MU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2QxNDmHF2Ryn.diag
[2025-10-19 05:34:17] -rw-r--r--. 1 boincer umatlas     20823 Oct 19 05:34 stderr.txt
[2025-10-19 05:34:17] HITS file was successfully produced:
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas 207120898 Oct 19 05:30 shared/HITS.pool.root.1
[2025-10-19 05:34:17]  *** Contents of shared directory: ***
[2025-10-19 05:34:17] total 430332
[2025-10-19 05:34:17] -rw-r--r--. 2 boincer umatlas 229331320 Oct 18 22:33 ATLAS.root_0
[2025-10-19 05:34:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 22:33 start_atlas.sh
[2025-10-19 05:34:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 18 22:33 input.tar.gz
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas 207120898 Oct 19 05:30 HITS.pool.root.1
[2025-10-19 05:34:17] -rw-------. 1 boincer umatlas   3604480 Oct 19 05:34 result.tar.gz
05:34:19 (1105873): run_atlas exited; CPU time 57216.219222
05:34:19 (1105873): called boinc_finish(0)

</stderr_txt>
]]>

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