Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:51 (24054): wrapper (7.7.26015): starting
21:30:51 (24054): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 21:30:51] Arguments: --nthreads 12
[2025-10-18 21:30:51] Threads: 12
[2025-10-18 21:30:51] Checking for CVMFS
[2025-10-18 21:30:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 21:30:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 21:30:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 21:30:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 21:30:52] 2.11.2.0 2947 232258 99240 151870 1 56 19435810 20275201 1 130560 1 115303502 99.984 13621336 11421 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 21:30:52] CVMFS is ok
[2025-10-18 21:30:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 21:30:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 21:30:52] Further information can be found at the LHC@home message board.
[2025-10-18 21:30:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 21:30:52] Checking for apptainer binary...
[2025-10-18 21:30:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 21:30:52] Running /usr/bin/apptainer --version
[2025-10-18 21:30:52] apptainer version 1.3.2-1.el7
[2025-10-18 21:30:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 21:30:53] c-205-18.aglt2.org
[2025-10-18 21:30:53] apptainer works
[2025-10-18 21:30:53] Set ATHENA_PROC_NUMBER=12
[2025-10-18 21:30:53] Set ATHENA_CORE_NUMBER=12
[2025-10-18 21:30:53] Starting ATLAS job with PandaID=6850527304
[2025-10-18 21:30:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 22:29:19]  *** The last 200 lines of the pilot log: ***
[2025-10-18 22:29:19]  status_code=0
[2025-10-18 22:29:19]  storage_token=
[2025-10-18 22:29:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6850527304/log.46808902._003698.job.log.tgz.1
[2025-10-18 22:29:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/7e/log.46808902._003698.job.log.tgz.1
[2025-10-18 22:29:19]  workdir=None
[2025-10-18 22:29:19] ]
[2025-10-18 22:29:19] 2025-10-19 02:28:19,738 | INFO     | transferring file log.46808902._003698.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6850527304/log.46808902._003698.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 22:29:19] 2025-10-19 02:28:19,738 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6850527304/log.46808902._003698.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._003698.job
[2025-10-18 22:29:19] 2025-10-19 02:28:19,760 | INFO     | adding to output.list: log.46808902._003698.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/7e/log.46808902._003698.job.log.tg
[2025-10-18 22:29:19] 2025-10-19 02:28:19,761 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 22:29:19] 2025-10-19 02:28:19,761 | INFO     | summary of transferred files:
[2025-10-18 22:29:19] 2025-10-19 02:28:19,761 | INFO     |  -- lfn=log.46808902._003698.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 22:29:19] 2025-10-19 02:28:19,761 | INFO     | stage-out finished correctly
[2025-10-18 22:29:19] 2025-10-19 02:28:21,008 | INFO     | monitor loop #260: job 0:6850527304 is in state 'finished'
[2025-10-18 22:29:19] 2025-10-19 02:28:21,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 22:29:19] 2025-10-19 02:28:21,493 | INFO     | time since job start (3432s) is within the limit (172800.0s)
[2025-10-18 22:29:19] 2025-10-19 02:28:22,614 | INFO     | PID=27811 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 22:29:19] 2025-10-19 02:28:23,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 22:29:19] 2025-10-19 02:28:23,510 | INFO     | monitor loop #261: job 0:6850527304 is in state 'finished'
[2025-10-18 22:29:19] 2025-10-19 02:28:23,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 22:29:19] 2025-10-19 02:28:23,614 | INFO     | time since job start (3434s) is within the limit (172800.0s)
[2025-10-18 22:29:19] 2025-10-19 02:28:24,734 | INFO     | job 6850527304 has state=finished
[2025-10-18 22:29:19] 2025-10-19 02:28:24,734 | INFO     | preparing for final server update for job 6850527304 in state='finished'
[2025-10-18 22:29:19] 2025-10-19 02:28:24,735 | INFO     | this job has now completed (state=finished)
[2025-10-18 22:29:19] 2025-10-19 02:28:24,735 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 22:29:19] 2025-10-19 02:28:24,735 | INFO     | log transfer has been attempted: DONE
[2025-10-18 22:29:19] 2025-10-19 02:28:24,735 | INFO     | job 6850527304 has finished - writing final server update
[2025-10-18 22:29:19] 2025-10-19 02:28:24,736 | INFO     | total number of processed events: 400 (read)
[2025-10-18 22:29:19] 2025-10-19 02:28:24,737 | INFO     | executing command: lscpu
[2025-10-18 22:29:19] 2025-10-19 02:28:24,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 22:29:19] 2025-10-19 02:28:25,620 | INFO     | time since job start (3436s) is within the limit (172800.0s)
[2025-10-18 22:29:19] 2025-10-19 02:28:26,028 | INFO     | monitor loop #262: job 0:6850527304 is in state 'finished'
[2025-10-18 22:29:19] 2025-10-19 02:28:26,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 22:29:19] 2025-10-19 02:28:27,626 | INFO     | time since job start (3438s) is within the limit (172800.0s)
[2025-10-18 22:29:19] 2025-10-19 02:28:28,532 | INFO     | monitor loop #263: job 0:6850527304 is in state 'finished'
[2025-10-18 22:29:19] 2025-10-19 02:28:28,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,604 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 22:29:19] 2025-10-19 02:28:29,608 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-18 22:29:19] 2025-10-19 02:28:29,610 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850527304/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,611 | INFO     | extracted standard info from prmon json
[2025-10-18 22:29:19] 2025-10-19 02:28:29,611 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 22:29:19] 2025-10-19 02:28:29,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 22:29:19] 2025-10-19 02:28:29,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 22:29:19] 2025-10-19 02:28:29,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 22:29:19] 2025-10-19 02:28:29,613 | INFO     | fitting pss+swap vs Time
[2025-10-18 22:29:19] 2025-10-19 02:28:29,613 | INFO     | sum of square deviations: 36465800.0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,613 | INFO     | sum of deviations: -3234713123.9999995
[2025-10-18 22:29:19] 2025-10-19 02:28:29,614 | INFO     | mean x: 1760839267.0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,614 | INFO     | mean y: 2823485.897959184
[2025-10-18 22:29:19] 2025-10-19 02:28:29,614 | INFO     | -- intersect: 156198762865.24625
[2025-10-18 22:29:19] 2025-10-19 02:28:29,614 | INFO     | intersect: 156198762865.24625
[2025-10-18 22:29:19] 2025-10-19 02:28:29,614 | INFO     | chi2: 0.08202208033423719
[2025-10-18 22:29:19] 2025-10-19 02:28:29,614 | INFO     | -- intersect: 156198762865.24625
[2025-10-18 22:29:19] 2025-10-19 02:28:29,615 | INFO     | current memory leak: -88.71 B/s (using 49 data points, chi2=0.08)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,615 | INFO     | could have reported an average CPU frequency of 1942 MHz (5 samples)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,615 | INFO     | ..............................
[2025-10-18 22:29:19] 2025-10-19 02:28:29,615 | INFO     | . Timing measurements:
[2025-10-18 22:29:19] 2025-10-19 02:28:29,615 | INFO     | . get job = 0 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | . initial setup = 2 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | . payload setup = 7 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | . stage-in = 0 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | . payload execution = 3401 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | . stage-out = 0 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | . log creation = 0 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,616 | INFO     | ..............................
[2025-10-18 22:29:19] 2025-10-19 02:28:29,636 | INFO     | time since job start (3440s) is within the limit (172800.0s)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,902 | INFO     | 
[2025-10-18 22:29:19] 2025-10-19 02:28:29,903 | INFO     | job summary report
[2025-10-18 22:29:19] 2025-10-19 02:28:29,903 | INFO     | --------------------------------------------------
[2025-10-18 22:29:19] 2025-10-19 02:28:29,903 | INFO     | PanDA job id: 6850527304
[2025-10-18 22:29:19] 2025-10-19 02:28:29,903 | INFO     | task id: 46808902
[2025-10-18 22:29:19] 2025-10-19 02:28:29,903 | INFO     | errors: (none)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,903 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 22:29:19] 2025-10-19 02:28:29,904 | INFO     | pilot state: finished 
[2025-10-18 22:29:19] 2025-10-19 02:28:29,904 | INFO     | transexitcode: 0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,904 | INFO     | exeerrorcode: 0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,904 | INFO     | exeerrordiag: 
[2025-10-18 22:29:19] 2025-10-19 02:28:29,904 | INFO     | exitcode: 0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,904 | INFO     | exitmsg: OK
[2025-10-18 22:29:19] 2025-10-19 02:28:29,905 | INFO     | cpuconsumptiontime: 35599 s
[2025-10-18 22:29:19] 2025-10-19 02:28:29,905 | INFO     | nevents: 400
[2025-10-18 22:29:19] 2025-10-19 02:28:29,905 | INFO     | neventsw: 0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,905 | INFO     | pid: 1883
[2025-10-18 22:29:19] 2025-10-19 02:28:29,905 | INFO     | pgrp: 1883
[2025-10-18 22:29:19] 2025-10-19 02:28:29,905 | INFO     | corecount: 12
[2025-10-18 22:29:19] 2025-10-19 02:28:29,906 | INFO     | event service: False
[2025-10-18 22:29:19] 2025-10-19 02:28:29,906 | INFO     | sizes: {0: 2348622, 1: 2348877, 6: 2349139, 12: 2349167, 3411: 2374750, 3412: 2374749, 3414: 2383931, 3417: 2383987, 3424: 2384213}
[2025-10-18 22:29:19] 2025-10-19 02:28:29,906 | INFO     | --------------------------------------------------
[2025-10-18 22:29:19] 2025-10-19 02:28:29,906 | INFO     | 
[2025-10-18 22:29:19] 2025-10-19 02:28:29,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 22:29:19] 2025-10-19 02:28:29,980 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,984 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 22:29:19] 2025-10-19 02:28:29,984 | INFO     | job 6850527304 has completed (purged errors)
[2025-10-18 22:29:19] 2025-10-19 02:28:29,984 | INFO     | overall cleanup function is called
[2025-10-18 22:29:19] 2025-10-19 02:28:30,993 | INFO     | --- collectZombieJob: --- 10, [1883]
[2025-10-18 22:29:19] 2025-10-19 02:28:30,993 | INFO     | zombie collector waiting for pid 1883
[2025-10-18 22:29:19] 2025-10-19 02:28:30,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 22:29:19] 2025-10-19 02:28:30,993 | INFO     | collected zombie processes
[2025-10-18 22:29:19] 2025-10-19 02:28:30,993 | INFO     | will attempt to kill all subprocesses of pid=1883
[2025-10-18 22:29:19] 2025-10-19 02:28:31,086 | INFO     | process IDs to be killed: [1883] (in reverse order)
[2025-10-18 22:29:19] 2025-10-19 02:28:31,139 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 22:29:19] 2025-10-19 02:28:31,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 22:29:19] 2025-10-19 02:28:31,143 | INFO     | did not find any defunct processes belonging to 1883
[2025-10-18 22:29:19] 2025-10-19 02:28:31,146 | INFO     | did not find any defunct processes belonging to 1883
[2025-10-18 22:29:19] 2025-10-19 02:28:31,146 | INFO     | ready for new job
[2025-10-18 22:29:19] 2025-10-19 02:28:31,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 22:29:19] 2025-10-19 02:28:31,148 | INFO     | ***************************************
[2025-10-18 22:29:19] 2025-10-19 02:28:31,148 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 22:29:19] 2025-10-19 02:28:31,148 | INFO     | ***************************************
[2025-10-18 22:29:19] 2025-10-19 02:28:31,148 | INFO     | 
[2025-10-18 22:29:19] 2025-10-19 02:28:31,149 | INFO     | architecture information:
[2025-10-18 22:29:19] 2025-10-19 02:28:31,149 | INFO     | executing command: cat /etc/os-release
[2025-10-18 22:29:19] 2025-10-19 02:28:31,164 | INFO     | cat /etc/os-release:
[2025-10-18 22:29:19] NAME="CentOS Linux"
[2025-10-18 22:29:19] VERSION="7 (Core)"
[2025-10-18 22:29:19] ID="centos"
[2025-10-18 22:29:19] ID_LIKE="rhel fedora"
[2025-10-18 22:29:19] VERSION_ID="7"
[2025-10-18 22:29:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 22:29:19] ANSI_COLOR="0;31"
[2025-10-18 22:29:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 22:29:19] HOME_URL="https://www.centos.org/"
[2025-10-18 22:29:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 22:29:19] 
[2025-10-18 22:29:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 22:29:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 22:29:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 22:29:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 22:29:19] 
[2025-10-18 22:29:19] 2025-10-19 02:28:31,165 | INFO     | ***************************************
[2025-10-18 22:29:19] 2025-10-19 02:28:31,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 22:29:19] 2025-10-19 02:28:31,684 | INFO     | sufficient remaining disk space (29470228480 B)
[2025-10-18 22:29:19] 2025-10-19 02:28:31,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 22:29:19] 2025-10-19 02:28:31,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 22:29:19] 2025-10-19 02:28:31,685 | INFO     | update_server=False
[2025-10-18 22:29:19] 2025-10-19 02:28:31,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 22:29:19] 2025-10-19 02:28:31,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 22:29:19] 2025-10-19 02:28:31,867 | INFO     | all payload control threads have been joined
[2025-10-18 22:29:19] 2025-10-19 02:28:32,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 22:29:19] 2025-10-19 02:28:32,048 | INFO     | aborting loop
[2025-10-18 22:29:19] 2025-10-19 02:28:32,564 | INFO     | all data control threads have been joined
[2025-10-18 22:29:19] 2025-10-19 02:28:32,691 | INFO     | [job] retrieve thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:32,691 | INFO     | [job] queue monitor thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:32,697 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:32,798 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:32,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 22:29:19] 2025-10-19 02:28:32,872 | INFO     | [payload] control thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:32,966 | INFO     | all job control threads have been joined
[2025-10-18 22:29:19] 2025-10-19 02:28:33,053 | INFO     | [job] job monitor thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,399 | INFO     | [payload] validate_post thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,403 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,410 | INFO     | [data] copytool_in thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,569 | INFO     | [data] control thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 22:29:19] 2025-10-19 02:28:33,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,785 | INFO     | [job] validate thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:33,972 | INFO     | [job] control thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:34,184 | INFO     | [payload] failed_post thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:34,867 | INFO     | [data] copytool_out thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:28:37,649 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 22:29:19] 2025-10-19 02:29:02,847 | INFO     | PID=27811 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 22:29:19] 2025-10-19 02:29:02,848 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 22:29:19] 2025-10-19 02:29:02,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 22:29:19] 2025-10-19 02:29:02,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 22:29:19] 2025-10-19 02:29:14,062 | INFO     | [monitor] cgroup control has ended
[2025-10-18 22:29:19] 2025-10-19 02:29:14,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053141944128)>', '<ExcThread(monitor, started 140052558501632)>']
[2025-10-18 22:29:19] 2025-10-19 02:29:14,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 22:29:19] 2025-10-19 02:29:14,909 | INFO     | [monitor] control thread has ended
[2025-10-18 22:29:19] 2025-10-19 02:29:19,534 | INFO     | all workflow threads have been joined
[2025-10-18 22:29:19] 2025-10-19 02:29:19,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 22:29:19] 2025-10-19 02:29:19,534 | INFO     | traces error code: 0
[2025-10-18 22:29:19] 2025-10-19 02:29:19,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 22:29:19] 2025-10-19 02:29:19,621 [wrapper] ==== pilot stdout END ====
[2025-10-18 22:29:19] 2025-10-19 02:29:19,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 22:29:19] 2025-10-19 02:29:19,629 [wrapper] pilotpid: 27811
[2025-10-18 22:29:19] 2025-10-19 02:29:19,633 [wrapper] Pilot exit status: 0
[2025-10-18 22:29:19] 2025-10-19 02:29:19,650 [wrapper] pandaids: 6850527304
[2025-10-18 22:29:19] 2025-10-19 02:29:19,698 [wrapper] cleanup supervisor_pilot 29771 27812
[2025-10-18 22:29:19] 2025-10-19 02:29:19,702 [wrapper] Test setup, not cleaning
[2025-10-18 22:29:19] 2025-10-19 02:29:19,706 [wrapper] apfmon messages muted
[2025-10-18 22:29:19] 2025-10-19 02:29:19,710 [wrapper] ==== wrapper stdout END ====
[2025-10-18 22:29:19] 2025-10-19 02:29:19,714 [wrapper] ==== wrapper stderr END ====
[2025-10-18 22:29:19]  *** Error codes and diagnostics ***
[2025-10-18 22:29:19]     "exeErrorCode": 0,
[2025-10-18 22:29:19]     "exeErrorDiag": "",
[2025-10-18 22:29:19]     "pilotErrorCode": 0,
[2025-10-18 22:29:19]     "pilotErrorDiag": "",
[2025-10-18 22:29:19]  *** Listing of results directory ***
[2025-10-18 22:29:19] total 335940
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 14:42 pilot3.tar.gz
[2025-10-18 22:29:19] -rwx------ 1 boincer umatlas     36292 Oct 18 14:52 runpilot2-wrapper.sh
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 14:52 queuedata.json
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas       100 Oct 18 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 22:29:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 21:30 run_atlas
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas       105 Oct 18 21:30 job.xml
[2025-10-18 22:29:19] -rw-r--r-- 2 boincer umatlas 191850282 Oct 18 21:30 EVNT.46808900._000149.pool.root.1
[2025-10-18 22:29:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 21:30 start_atlas.sh
[2025-10-18 22:29:19] drwxrwx--x 2 boincer umatlas      4096 Oct 18 21:30 shared
[2025-10-18 22:29:19] -rw-r--r-- 2 boincer umatlas    569674 Oct 18 21:30 input.tar.gz
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas         0 Oct 18 21:30 boinc_lockfile
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas      2503 Oct 18 21:30 pandaJob.out
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas    976750 Oct 18 21:31 agis_schedconf.cvmfs.json
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas   1560740 Oct 18 21:31 agis_ddmendpoints.agis.ALL.json
[2025-10-18 22:29:19] drwx------ 5 boincer umatlas      4096 Oct 18 21:31 pilot3
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 22:21 init_data.xml
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas 146493817 Oct 18 22:27 HITS.46808902._003698.pool.root.1
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas       529 Oct 18 22:28 boinc_task_state.xml
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas      1045 Oct 18 22:28 memory_monitor_summary.json
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas    366989 Oct 18 22:28 log.46808902._003698.job.log.tgz.1
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas      7844 Oct 18 22:28 heartbeat.json
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas        95 Oct 18 22:29 pilot_heartbeat.json
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 22:29 boinc_mmap_file
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas        27 Oct 18 22:29 wrapper_checkpoint.txt
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas      4746 Oct 18 22:29 pilotlog.txt
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas    511482 Oct 18 22:29 log.46808902._003698.job.log.1
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas       357 Oct 18 22:29 output.list
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas       620 Oct 18 22:29 runtime_log
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas    901120 Oct 18 22:29 result.tar.gz
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas       659 Oct 18 22:29 H4UKDmeDRU8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0mcMDmqv4AVo.diag
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 22:29 runtime_log.err
[2025-10-18 22:29:19] -rw-r--r-- 1 boincer umatlas     22233 Oct 18 22:29 stderr.txt
[2025-10-18 22:29:19] HITS file was successfully produced:
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas 146493817 Oct 18 22:27 shared/HITS.pool.root.1
[2025-10-18 22:29:19]  *** Contents of shared directory: ***
[2025-10-18 22:29:19] total 331876
[2025-10-18 22:29:19] -rw-r--r-- 2 boincer umatlas 191850282 Oct 18 21:30 ATLAS.root_0
[2025-10-18 22:29:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 21:30 start_atlas.sh
[2025-10-18 22:29:19] -rw-r--r-- 2 boincer umatlas    569674 Oct 18 21:30 input.tar.gz
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas 146493817 Oct 18 22:27 HITS.pool.root.1
[2025-10-18 22:29:19] -rw------- 1 boincer umatlas    901120 Oct 18 22:29 result.tar.gz
22:29:21 (24054): run_atlas exited; CPU time 35572.963542
22:29:21 (24054): called boinc_finish(0)

</stderr_txt>
]]>

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