Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:34:20 (3620): wrapper (7.7.26015): starting
02:34:20 (3620): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 02:34:20] Arguments: --nthreads 4
[2025-10-19 02:34:20] Threads: 4
[2025-10-19 02:34:20] Checking for CVMFS
[2025-10-19 02:34:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 02:34:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 02:34:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 02:34:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 02:34:35] 2.12.7.0 3842 0 25300 151870 3 1 3897321 4194305 0 130560 0 0 0.000 1291 1031 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-19 02:34:35] CVMFS is ok
[2025-10-19 02:34:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 02:34:35] Checking for apptainer binary...
[2025-10-19 02:34:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 02:34:35] Running /usr/bin/apptainer --version
[2025-10-19 02:34:35] apptainer version 1.0.3
[2025-10-19 02:34:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 02:34:36] TeeC04
[2025-10-19 02:34:36] apptainer works
[2025-10-19 02:34:36] Set ATHENA_PROC_NUMBER=4
[2025-10-19 02:34:36] Set ATHENA_CORE_NUMBER=4
[2025-10-19 02:34:36] Starting ATLAS job with PandaID=6850908099
[2025-10-19 02:34:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 05:37:20]  *** The last 200 lines of the pilot log: ***
[2025-10-19 05:37:20] 2025-10-19 04:36:21,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:37:20] 2025-10-19 04:36:21,976 | INFO     | time since job start (10886s) is within the limit (172800.0s)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,719 | INFO     | monitor loop #826: job 0:6850908099 is in state 'finished'
[2025-10-19 05:37:20] 2025-10-19 04:36:23,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,791 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 05:37:20] 2025-10-19 04:36:23,792 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3198.2455
[2025-10-19 05:37:20] 2025-10-19 04:36:23,793 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6850908099/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,793 | INFO     | extracted standard info from prmon json
[2025-10-19 05:37:20] 2025-10-19 04:36:23,793 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 05:37:20] 2025-10-19 04:36:23,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 05:37:20] 2025-10-19 04:36:23,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 05:37:20] 2025-10-19 04:36:23,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 05:37:20] 2025-10-19 04:36:23,795 | INFO     | fitting pss+swap vs Time
[2025-10-19 05:37:20] 2025-10-19 04:36:23,795 | INFO     | sum of square deviations: 1719429448.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,796 | INFO     | sum of deviations: -24144260367.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,796 | INFO     | mean x: 1760843086.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,796 | INFO     | mean y: 2408873.0395480227
[2025-10-19 05:37:20] 2025-10-19 04:36:23,796 | INFO     | -- intersect: 24728200316.978905
[2025-10-19 05:37:20] 2025-10-19 04:36:23,796 | INFO     | intersect: 24728200316.978905
[2025-10-19 05:37:20] 2025-10-19 04:36:23,796 | INFO     | chi2: 1.7645139231319071
[2025-10-19 05:37:20] 2025-10-19 04:36:23,797 | INFO     | sum of square deviations: 1577789583.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,797 | INFO     | sum of deviations: -22973162694.500004
[2025-10-19 05:37:20] 2025-10-19 04:36:23,797 | INFO     | mean x: 1760842933.5
[2025-10-19 05:37:20] 2025-10-19 04:36:23,797 | INFO     | mean y: 2410134.261627907
[2025-10-19 05:37:20] 2025-10-19 04:36:23,797 | INFO     | -- intersect: 25640893000.805023
[2025-10-19 05:37:20] 2025-10-19 04:36:23,797 | INFO     | intersect: 25640893000.805023
[2025-10-19 05:37:20] 2025-10-19 04:36:23,798 | INFO     | chi2: 1.761281270902617
[2025-10-19 05:37:20] 2025-10-19 04:36:23,798 | INFO     | current chi2=1.761281270902617 (change=0.18320355463969754 %)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,798 | INFO     | right removable region: 171
[2025-10-19 05:37:20] 2025-10-19 04:36:23,798 | INFO     | sum of square deviations: 1577789583.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,798 | INFO     | sum of deviations: -46158739528.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,798 | INFO     | mean x: 1760843238.5
[2025-10-19 05:37:20] 2025-10-19 04:36:23,799 | INFO     | mean y: 2432165.3604651163
[2025-10-19 05:37:20] 2025-10-19 04:36:23,799 | INFO     | -- intersect: 51516465006.81159
[2025-10-19 05:37:20] 2025-10-19 04:36:23,799 | INFO     | intersect: 51516465006.81159
[2025-10-19 05:37:20] 2025-10-19 04:36:23,799 | INFO     | chi2: 0.34478862579288444
[2025-10-19 05:37:20] 2025-10-19 04:36:23,799 | INFO     | current chi2=0.34478862579288444 (change=80.4598523552081 %)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,799 | INFO     | sum of square deviations: 1444149868.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | sum of deviations: -38140897637.00001
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | mean x: 1760843391.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | mean y: 2423008.706586826
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | -- intersect: 46507393870.16498
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | intersect: 46507393870.16498
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | chi2: 0.3251660435538568
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | current chi2=0.3251660435538568 (change=5.691191869773273 %)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | left removable region: 20
[2025-10-19 05:37:20] 2025-10-19 04:36:23,800 | INFO     | sum of square deviations: 1067554900.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | sum of deviations: -19430066602.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | mean x: 1760843513.0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | mean y: 2402265.9072847683
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | -- intersect: 32050690118.16636
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | intersect: 32050690118.16636
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | chi2: 0.23012167846412793
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | -- intersect: 32050690118.16636
[2025-10-19 05:37:20] 2025-10-19 04:36:23,801 | INFO     | current memory leak: -18.20 B/s (using 151 data points, chi2=0.23)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | could have reported an average CPU frequency of 3153 MHz (9 samples)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | ..............................
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . Timing measurements:
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . get job = 0 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . initial setup = 8 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . payload setup = 5 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . stage-in = 0 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . payload execution = 10800 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . stage-out = 27 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | . log creation = 0 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,802 | INFO     | ..............................
[2025-10-19 05:37:20] 2025-10-19 04:36:23,850 | INFO     | 
[2025-10-19 05:37:20] 2025-10-19 04:36:23,850 | INFO     | job summary report
[2025-10-19 05:37:20] 2025-10-19 04:36:23,850 | INFO     | --------------------------------------------------
[2025-10-19 05:37:20] 2025-10-19 04:36:23,850 | INFO     | PanDA job id: 6850908099
[2025-10-19 05:37:20] 2025-10-19 04:36:23,850 | INFO     | task id: 46808926
[2025-10-19 05:37:20] 2025-10-19 04:36:23,850 | INFO     | errors: (none)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | pilot state: finished 
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | transexitcode: 0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | exeerrorcode: 0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | exeerrordiag: 
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | exitcode: 0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | exitmsg: OK
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | cpuconsumptiontime: 41509 s
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | nevents: 400
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | neventsw: 0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | pid: 14284
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | pgrp: 14284
[2025-10-19 05:37:20] 2025-10-19 04:36:23,851 | INFO     | corecount: 4
[2025-10-19 05:37:20] 2025-10-19 04:36:23,852 | INFO     | event service: False
[2025-10-19 05:37:20] 2025-10-19 04:36:23,852 | INFO     | sizes: {0: 2348861, 2: 2349123, 11: 2349151, 10809: 2378117, 10837: 2387113, 10839: 2387169, 10875: 2387555}
[2025-10-19 05:37:20] 2025-10-19 04:36:23,852 | INFO     | --------------------------------------------------
[2025-10-19 05:37:20] 2025-10-19 04:36:23,852 | INFO     | 
[2025-10-19 05:37:20] 2025-10-19 04:36:23,852 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-19 05:37:20] 2025-10-19 04:36:23,863 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,865 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 05:37:20] 2025-10-19 04:36:23,865 | INFO     | job 6850908099 has completed (purged errors)
[2025-10-19 05:37:20] 2025-10-19 04:36:23,865 | INFO     | overall cleanup function is called
[2025-10-19 05:37:20] 2025-10-19 04:36:24,871 | INFO     | --- collectZombieJob: --- 10, [14284]
[2025-10-19 05:37:20] 2025-10-19 04:36:24,872 | INFO     | zombie collector waiting for pid 14284
[2025-10-19 05:37:20] 2025-10-19 04:36:24,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 05:37:20] 2025-10-19 04:36:24,872 | INFO     | collected zombie processes
[2025-10-19 05:37:20] 2025-10-19 04:36:24,873 | INFO     | will attempt to kill all subprocesses of pid=14284
[2025-10-19 05:37:20] 2025-10-19 04:36:24,932 | INFO     | process IDs to be killed: [14284] (in reverse order)
[2025-10-19 05:37:20] 2025-10-19 04:36:24,962 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 05:37:20] 2025-10-19 04:36:24,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 05:37:20] 2025-10-19 04:36:24,964 | INFO     | did not find any defunct processes belonging to 14284
[2025-10-19 05:37:20] 2025-10-19 04:36:24,965 | INFO     | did not find any defunct processes belonging to 14284
[2025-10-19 05:37:20] 2025-10-19 04:36:24,965 | INFO     | ready for new job
[2025-10-19 05:37:20] 2025-10-19 04:36:24,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 05:37:20] 2025-10-19 04:36:24,966 | INFO     | ***************************************
[2025-10-19 05:37:20] 2025-10-19 04:36:24,966 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 05:37:20] 2025-10-19 04:36:24,966 | INFO     | ***************************************
[2025-10-19 05:37:20] 2025-10-19 04:36:24,967 | INFO     | 
[2025-10-19 05:37:20] 2025-10-19 04:36:24,984 | INFO     | architecture information:
[2025-10-19 05:37:20] 2025-10-19 04:36:24,984 | INFO     | executing command: cat /etc/os-release
[2025-10-19 05:37:20] 2025-10-19 04:36:24,992 | INFO     | cat /etc/os-release:
[2025-10-19 05:37:20] NAME="CentOS Linux"
[2025-10-19 05:37:20] VERSION="7 (Core)"
[2025-10-19 05:37:20] ID="centos"
[2025-10-19 05:37:20] ID_LIKE="rhel fedora"
[2025-10-19 05:37:20] VERSION_ID="7"
[2025-10-19 05:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 05:37:20] ANSI_COLOR="0;31"
[2025-10-19 05:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 05:37:20] HOME_URL="https://www.centos.org/"
[2025-10-19 05:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 05:37:20] 
[2025-10-19 05:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 05:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 05:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 05:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 05:37:20] 
[2025-10-19 05:37:20] 2025-10-19 04:36:24,992 | INFO     | ***************************************
[2025-10-19 05:37:20] 2025-10-19 04:36:25,496 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-19 05:37:20] 2025-10-19 04:36:25,508 | INFO     | sufficient remaining disk space (431170256896 B)
[2025-10-19 05:37:20] 2025-10-19 04:36:25,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 05:37:20] 2025-10-19 04:36:25,509 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 05:37:20] 2025-10-19 04:36:25,509 | INFO     | update_server=False
[2025-10-19 05:37:20] 2025-10-19 04:36:25,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 05:37:20] 2025-10-19 04:36:25,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 05:37:20] 2025-10-19 04:36:25,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:37:20] 2025-10-19 04:36:25,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:37:20] 2025-10-19 04:36:25,510 | INFO     | aborting loop
[2025-10-19 05:37:20] 2025-10-19 04:36:26,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 05:37:20] 2025-10-19 04:36:26,207 | INFO     | all job control threads have been joined
[2025-10-19 05:37:20] 2025-10-19 04:36:26,415 | INFO     | all payload control threads have been joined
[2025-10-19 05:37:20] 2025-10-19 04:36:26,429 | INFO     | all data control threads have been joined
[2025-10-19 05:37:20] 2025-10-19 04:36:26,515 | INFO     | [job] retrieve thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:26,515 | INFO     | [job] job monitor thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:26,516 | INFO     | [job] queue monitor thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:26,784 | INFO     | [data] copytool_in thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:26,914 | INFO     | [payload] failed_post thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:26,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,212 | INFO     | [job] control thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,413 | INFO     | [job] validate thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,421 | INFO     | [payload] control thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,435 | INFO     | [data] control thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,480 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,481 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,515 | INFO     | [data] copytool_out thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,734 | INFO     | [payload] validate_post thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:27,888 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:30,139 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 05:37:20] 2025-10-19 04:36:55,089 | INFO     | PID=7917 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-19 05:37:20] 2025-10-19 04:36:55,089 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 05:37:20] 2025-10-19 04:36:55,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 05:37:20] 2025-10-19 04:36:55,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 05:37:20] 2025-10-19 04:37:13,200 | INFO     | [monitor] cgroup control has ended
[2025-10-19 05:37:20] 2025-10-19 04:37:14,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220411828032)>', '<ExcThread(monitor, started 140220112549632)>']
[2025-10-19 05:37:20] 2025-10-19 04:37:15,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 05:37:20] 2025-10-19 04:37:15,196 | INFO     | [monitor] control thread has ended
[2025-10-19 05:37:20] 2025-10-19 04:37:20,015 | INFO     | all workflow threads have been joined
[2025-10-19 05:37:20] 2025-10-19 04:37:20,015 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 05:37:20] 2025-10-19 04:37:20,016 | INFO     | traces error code: 0
[2025-10-19 05:37:20] 2025-10-19 04:37:20,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 05:37:20] 2025-10-19 04:37:20,109 [wrapper] ==== pilot stdout END ====
[2025-10-19 05:37:20] 2025-10-19 04:37:20,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 05:37:20] 2025-10-19 04:37:20,113 [wrapper] pilotpid: 7917
[2025-10-19 05:37:20] 2025-10-19 04:37:20,115 [wrapper] Pilot exit status: 0
[2025-10-19 05:37:20] 2025-10-19 04:37:20,138 [wrapper] pandaids: 6850908099
[2025-10-19 05:37:20] 2025-10-19 04:37:20,155 [wrapper] cleanup supervisor_pilot   33523 7918
[2025-10-19 05:37:20] 2025-10-19 04:37:20,157 [wrapper] Test setup, not cleaning
[2025-10-19 05:37:20] 2025-10-19 04:37:20,159 [wrapper] apfmon messages muted
[2025-10-19 05:37:20] 2025-10-19 04:37:20,161 [wrapper] ==== wrapper stdout END ====
[2025-10-19 05:37:20] 2025-10-19 04:37:20,163 [wrapper] ==== wrapper stderr END ====
[2025-10-19 05:37:20]  *** Error codes and diagnostics ***
[2025-10-19 05:37:20]     "exeErrorCode": 0,
[2025-10-19 05:37:20]     "exeErrorDiag": "",
[2025-10-19 05:37:20]     "pilotErrorCode": 0,
[2025-10-19 05:37:20]     "pilotErrorDiag": "",
[2025-10-19 05:37:20]  *** Listing of results directory ***
[2025-10-19 05:37:20] total 433548
[2025-10-19 05:37:20] -rw-r--r-- 1 m m    557409 Oct 19 01:20 pilot3.tar.gz
[2025-10-19 05:37:20] -rw-r--r-- 1 m m      5112 Oct 19 01:37 queuedata.json
[2025-10-19 05:37:20] -rwx------ 1 m m     36292 Oct 19 01:37 runpilot2-wrapper.sh
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m       100 Oct 19 02:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 05:37:20] -rwxr-xr-x 1 m m      7986 Oct 19 02:34 run_atlas
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m       105 Oct 19 02:34 job.xml
[2025-10-19 05:37:20] -rw-r--r-- 2 m m     15120 Oct 19 02:34 start_atlas.sh
[2025-10-19 05:37:20] drwxrwx--x 2 m m      4096 Oct 19 02:34 shared
[2025-10-19 05:37:20] -rw-r--r-- 2 m m    569679 Oct 19 02:34 input.tar.gz
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m      5963 Oct 19 02:34 init_data.xml
[2025-10-19 05:37:20] -rw-r--r-- 2 m m 230473807 Oct 19 02:34 EVNT.46808924._000124.pool.root.1
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m         0 Oct 19 02:34 boinc_lockfile
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m      2544 Oct 19 02:34 pandaJob.out
[2025-10-19 05:37:20] -rw------- 1 m m    976750 Oct 19 02:34 agis_schedconf.cvmfs.json
[2025-10-19 05:37:20] drwx------ 5 m m      4096 Oct 19 02:34 pilot3
[2025-10-19 05:37:20] -rw------- 1 m m 205840456 Oct 19 05:34 HITS.46808926._003852.pool.root.1
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m       530 Oct 19 05:35 boinc_task_state.xml
[2025-10-19 05:37:20] -rw------- 1 m m      1013 Oct 19 05:35 memory_monitor_summary.json
[2025-10-19 05:37:20] -rw------- 1 m m   1560740 Oct 19 05:35 agis_ddmendpoints.agis.ALL.json
[2025-10-19 05:37:20] -rw------- 1 m m    348542 Oct 19 05:35 log.46808926._003852.job.log.tgz.1
[2025-10-19 05:37:20] -rw------- 1 m m      7754 Oct 19 05:36 heartbeat.json
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m        28 Oct 19 05:36 wrapper_checkpoint.txt
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m      8192 Oct 19 05:36 boinc_mmap_file
[2025-10-19 05:37:20] -rw------- 1 m m        95 Oct 19 05:36 pilot_heartbeat.json
[2025-10-19 05:37:20] -rw------- 1 m m      4745 Oct 19 05:37 pilotlog.txt
[2025-10-19 05:37:20] -rw------- 1 m m   1518493 Oct 19 05:37 log.46808926._003852.job.log.1
[2025-10-19 05:37:20] -rw------- 1 m m       357 Oct 19 05:37 output.list
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m       620 Oct 19 05:37 runtime_log
[2025-10-19 05:37:20] -rw------- 1 m m   1884160 Oct 19 05:37 result.tar.gz
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m      8618 Oct 19 05:37 runtime_log.err
[2025-10-19 05:37:20] -rw------- 1 m m       639 Oct 19 05:37 P74KDmfbWU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4eyNDmNnm59n.diag
[2025-10-19 05:37:20] -rw-rw-r-- 1 m m     20776 Oct 19 05:37 stderr.txt
[2025-10-19 05:37:20] HITS file was successfully produced:
[2025-10-19 05:37:20] -rw------- 1 m m 205840456 Oct 19 05:34 shared/HITS.pool.root.1
[2025-10-19 05:37:20]  *** Contents of shared directory: ***
[2025-10-19 05:37:20] total 428516
[2025-10-19 05:37:20] -rw-r--r-- 2 m m     15120 Oct 19 02:34 start_atlas.sh
[2025-10-19 05:37:20] -rw-r--r-- 2 m m    569679 Oct 19 02:34 input.tar.gz
[2025-10-19 05:37:20] -rw-r--r-- 2 m m 230473807 Oct 19 02:34 ATLAS.root_0
[2025-10-19 05:37:20] -rw------- 1 m m 205840456 Oct 19 05:34 HITS.pool.root.1
[2025-10-19 05:37:20] -rw------- 1 m m   1884160 Oct 19 05:37 result.tar.gz
05:37:21 (3620): run_atlas exited; CPU time 41603.925727
05:37:21 (3620): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN