Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:52 (3828810): wrapper (7.7.26015): starting
11:16:52 (3828810): wrapper: running run_atlas (--nthreads 2)
[2025-10-19 11:16:52] Arguments: --nthreads 2
[2025-10-19 11:16:52] Threads: 2
[2025-10-19 11:16:52] Checking for CVMFS
[2025-10-19 11:16:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 11:16:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 11:16:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 11:16:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 11:16:52] 2.9.2.0 2746064 4866 61860 151882 1 57 28925011 36864001 0 130560 0 2820832 99.988 173788 2414 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 11:16:52] CVMFS is ok
[2025-10-19 11:16:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 11:16:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 11:16:52] Further information can be found at the LHC@home message board.
[2025-10-19 11:16:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 11:16:52] Checking for apptainer binary...
[2025-10-19 11:16:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 11:16:52] Running /usr/bin/apptainer --version
[2025-10-19 11:16:52] apptainer version 1.4.1-1.1
[2025-10-19 11:16:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 11:16:53] thA337
[2025-10-19 11:16:53] apptainer works
[2025-10-19 11:16:53] Set ATHENA_PROC_NUMBER=2
[2025-10-19 11:16:53] Set ATHENA_CORE_NUMBER=2
[2025-10-19 11:16:53] Starting ATLAS job with PandaID=6848042479
[2025-10-19 11:16:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 13:30:22]  *** The last 200 lines of the pilot log: ***
[2025-10-19 13:30:22] 2025-10-19 11:29:41,121 | INFO     | will abort loop
[2025-10-19 13:30:22] 2025-10-19 11:29:41,157 | INFO     | all data control threads have been joined
[2025-10-19 13:30:22] 2025-10-19 11:29:41,799 | INFO     | [job] retrieve thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:41,800 | INFO     | [job] queue monitor thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:41,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 13:30:22] 2025-10-19 11:29:41,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 13:30:22] 2025-10-19 11:29:41,924 | INFO     | [payload] control thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:42,053 | INFO     | all job control threads have been joined
[2025-10-19 13:30:22] 2025-10-19 11:29:42,127 | INFO     | [job] job monitor thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:42,163 | INFO     | [data] control thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:42,282 | INFO     | [data] copytool_in thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:42,529 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:42,736 | INFO     | [payload] failed_post thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:42,884 | INFO     | [job] validate thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:43,003 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:43,059 | INFO     | [job] control thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:43,218 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:43,291 | INFO     | [payload] validate_post thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:43,876 | INFO     | [data] copytool_out thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:45,902 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:29:51,552 | INFO     | job.realtimelogging is not enabled
[2025-10-19 13:30:22] 2025-10-19 11:29:52,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 13:30:22] 2025-10-19 11:30:11,095 | INFO     | PID=3832521 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 13:30:22] 2025-10-19 11:30:11,096 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 13:30:22] 2025-10-19 11:30:11,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 13:30:22] 2025-10-19 11:30:11,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 13:30:22] 2025-10-19 11:30:16,371 | INFO     | [monitor] cgroup control has ended
[2025-10-19 13:30:22] 2025-10-19 11:30:17,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682088290112)>', '<ExcThread(monitor, started 140681234339584)>']
[2025-10-19 13:30:22] 2025-10-19 11:30:18,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 13:30:22] 2025-10-19 11:30:18,129 | INFO     | [monitor] control thread has ended
[2025-10-19 13:30:22] 2025-10-19 11:30:22,402 | INFO     | all workflow threads have been joined
[2025-10-19 13:30:22] 2025-10-19 11:30:22,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 13:30:22] 2025-10-19 11:30:22,403 | INFO     | traces error code: 0
[2025-10-19 13:30:22] 2025-10-19 11:30:22,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 13:30:22] 2025-10-19 11:30:22,444 [wrapper] ==== pilot stdout END ====
[2025-10-19 13:30:22] 2025-10-19 11:30:22,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 13:30:22] 2025-10-19 11:30:22,450 [wrapper] pilotpid: 3832521
[2025-10-19 13:30:22] 2025-10-19 11:30:22,452 [wrapper] Pilot exit status: 0
[2025-10-19 13:30:22] 2025-10-19 11:30:22,458 [wrapper] pandaids: 6848042479
[2025-10-19 13:30:22] 2025-10-19 11:30:22,475 [wrapper] cleanup supervisor_pilot 3853224 3832522
[2025-10-19 13:30:22] 2025-10-19 11:30:22,477 [wrapper] Test setup, not cleaning
[2025-10-19 13:30:22] 2025-10-19 11:30:22,480 [wrapper] apfmon messages muted
[2025-10-19 13:30:22] 2025-10-19 11:30:22,483 [wrapper] ==== wrapper stdout END ====
[2025-10-19 13:30:22] 2025-10-19 11:30:22,485 [wrapper] ==== wrapper stderr END ====
[2025-10-19 13:30:22]  *** Error codes and diagnostics ***
[2025-10-19 13:30:22]     "exeErrorCode": 0,
[2025-10-19 13:30:22]     "exeErrorDiag": "",
[2025-10-19 13:30:22]     "pilotErrorCode": 0,
[2025-10-19 13:30:22]     "pilotErrorDiag": "",
[2025-10-19 13:30:22]  *** Listing of results directory ***
[2025-10-19 13:30:22] total 431236
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc    557409 Oct 18 21:44 pilot3.tar.gz
[2025-10-19 13:30:22] -rwx------ 1 boinc boinc     36292 Oct 18 22:07 runpilot2-wrapper.sh
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc      5112 Oct 18 22:07 queuedata.json
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc       100 Oct 19 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 13:30:22] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 11:16 run_atlas
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc       105 Oct 19 11:16 job.xml
[2025-10-19 13:30:22] -rw-r--r-- 2 boinc boinc 232762547 Oct 19 11:16 EVNT.46771634._001967.pool.root.1
[2025-10-19 13:30:22] -rw-r--r-- 2 boinc boinc    569672 Oct 19 11:16 input.tar.gz
[2025-10-19 13:30:22] -rw-r--r-- 2 boinc boinc     15120 Oct 19 11:16 start_atlas.sh
[2025-10-19 13:30:22] drwxrwx--x 2 boinc boinc      4096 Oct 19 11:16 shared
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc         0 Oct 19 11:16 boinc_setup_complete
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc      6205 Oct 19 11:16 init_data.xml
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc         0 Oct 19 11:16 boinc_lockfile
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc      2558 Oct 19 11:16 pandaJob.out
[2025-10-19 13:30:22] -rw------- 1 boinc boinc    976750 Oct 19 11:17 agis_schedconf.cvmfs.json
[2025-10-19 13:30:22] -rw------- 1 boinc boinc   1560740 Oct 19 11:17 agis_ddmendpoints.agis.ALL.json
[2025-10-19 13:30:22] drwx------ 5 boinc boinc      4096 Oct 19 11:17 pilot3
[2025-10-19 13:30:22] -rw------- 1 boinc boinc 202063031 Oct 19 13:29 HITS.46771637._046690.pool.root.1
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc       530 Oct 19 13:29 boinc_task_state.xml
[2025-10-19 13:30:22] -rw------- 1 boinc boinc      1015 Oct 19 13:29 memory_monitor_summary.json
[2025-10-19 13:30:22] -rw------- 1 boinc boinc    295528 Oct 19 13:29 log.46771637._046690.job.log.tgz.1
[2025-10-19 13:30:22] -rw------- 1 boinc boinc      7756 Oct 19 13:29 heartbeat.json
[2025-10-19 13:30:22] -rw------- 1 boinc boinc        95 Oct 19 13:30 pilot_heartbeat.json
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc      8192 Oct 19 13:30 boinc_mmap_file
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc        27 Oct 19 13:30 wrapper_checkpoint.txt
[2025-10-19 13:30:22] -rw------- 1 boinc boinc      5010 Oct 19 13:30 pilotlog.txt
[2025-10-19 13:30:22] -rw------- 1 boinc boinc   1142405 Oct 19 13:30 log.46771637._046690.job.log.1
[2025-10-19 13:30:22] -rw------- 1 boinc boinc       357 Oct 19 13:30 output.list
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc       620 Oct 19 13:30 runtime_log
[2025-10-19 13:30:22] -rw------- 1 boinc boinc   1454080 Oct 19 13:30 result.tar.gz
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc      8777 Oct 19 13:30 runtime_log.err
[2025-10-19 13:30:22] -rw------- 1 boinc boinc       659 Oct 19 13:30 o1JMDmpNSU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbxcMDm0QtoTm.diag
[2025-10-19 13:30:22] -rw-r--r-- 1 boinc boinc      6931 Oct 19 13:30 stderr.txt
[2025-10-19 13:30:22] HITS file was successfully produced:
[2025-10-19 13:30:22] -rw------- 1 boinc boinc 202063031 Oct 19 13:29 shared/HITS.pool.root.1
[2025-10-19 13:30:22]  *** Contents of shared directory: ***
[2025-10-19 13:30:22] total 426640
[2025-10-19 13:30:22] -rw-r--r-- 2 boinc boinc 232762547 Oct 19 11:16 ATLAS.root_0
[2025-10-19 13:30:22] -rw-r--r-- 2 boinc boinc    569672 Oct 19 11:16 input.tar.gz
[2025-10-19 13:30:22] -rw-r--r-- 2 boinc boinc     15120 Oct 19 11:16 start_atlas.sh
[2025-10-19 13:30:22] -rw------- 1 boinc boinc 202063031 Oct 19 13:29 HITS.pool.root.1
[2025-10-19 13:30:22] -rw------- 1 boinc boinc   1454080 Oct 19 13:30 result.tar.gz
13:30:23 (3828810): run_atlas exited; CPU time 15428.754413
13:30:23 (3828810): called boinc_finish(0)

</stderr_txt>
]]>

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