Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:30:43 (4073): wrapper (7.7.26015): starting
02:30:43 (4073): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 02:30:43] Arguments: --nthreads 4
[2025-10-19 02:30:43] Threads: 4
[2025-10-19 02:30:43] Checking for CVMFS
[2025-10-19 02:30:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 02:30:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 02:30:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 02:30:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 02:30:49] 2.11.5.0 4295 0 23944 151870 3 1 3612070 4194305 0 130560 0 0 0.000 1291 1072 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-19 02:30:49] CVMFS is ok
[2025-10-19 02:30:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 02:30:49] Checking for apptainer binary...
[2025-10-19 02:30:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 02:30:49] Running /usr/bin/apptainer --version
[2025-10-19 02:30:50] apptainer version 1.0.3
[2025-10-19 02:30:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 02:30:51] TeeC31
[2025-10-19 02:30:51] apptainer works
[2025-10-19 02:30:51] Set ATHENA_PROC_NUMBER=4
[2025-10-19 02:30:51] Set ATHENA_CORE_NUMBER=4
[2025-10-19 02:30:51] Starting ATLAS job with PandaID=6848035309
[2025-10-19 02:30:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 05:36:35]  *** The last 200 lines of the pilot log: ***
[2025-10-19 05:36:35] 2025-10-19 04:35:51,157 | INFO     | monitor loop #828: job 0:6848035309 is in state 'finished'
[2025-10-19 05:36:35] 2025-10-19 04:35:51,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 05:36:35] 2025-10-19 04:35:51,501 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.0507500000003
[2025-10-19 05:36:35] 2025-10-19 04:35:51,502 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6848035309/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,503 | INFO     | extracted standard info from prmon json
[2025-10-19 05:36:35] 2025-10-19 04:35:51,503 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 05:36:35] 2025-10-19 04:35:51,503 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 05:36:35] 2025-10-19 04:35:51,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 05:36:35] 2025-10-19 04:35:51,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 05:36:35] 2025-10-19 04:35:51,507 | INFO     | fitting pss+swap vs Time
[2025-10-19 05:36:35] 2025-10-19 04:35:51,507 | INFO     | sum of square deviations: 1838693438.8176866
[2025-10-19 05:36:35] 2025-10-19 04:35:51,509 | INFO     | sum of deviations: -25636012842.911583
[2025-10-19 05:36:35] 2025-10-19 04:35:51,509 | INFO     | mean x: 1760842984.1325967
[2025-10-19 05:36:35] 2025-10-19 04:35:51,509 | INFO     | mean y: 2409702.6629834254
[2025-10-19 05:36:35] 2025-10-19 04:35:51,509 | INFO     | -- intersect: 24552991329.038116
[2025-10-19 05:36:35] 2025-10-19 04:35:51,509 | INFO     | intersect: 24552991329.038116
[2025-10-19 05:36:35] 2025-10-19 04:35:51,510 | INFO     | chi2: 1.8534985984377657
[2025-10-19 05:36:35] 2025-10-19 04:35:51,510 | INFO     | sum of square deviations: 1690493328.7272737
[2025-10-19 05:36:35] 2025-10-19 04:35:51,512 | INFO     | sum of deviations: -24557231128.272728
[2025-10-19 05:36:35] 2025-10-19 04:35:51,512 | INFO     | mean x: 1760842831.6363637
[2025-10-19 05:36:35] 2025-10-19 04:35:51,512 | INFO     | mean y: 2410813.0113636362
[2025-10-19 05:36:35] 2025-10-19 04:35:51,512 | INFO     | -- intersect: 25581585638.62969
[2025-10-19 05:36:35] 2025-10-19 04:35:51,512 | INFO     | intersect: 25581585638.62969
[2025-10-19 05:36:35] 2025-10-19 04:35:51,513 | INFO     | chi2: 1.8494962483841815
[2025-10-19 05:36:35] 2025-10-19 04:35:51,513 | INFO     | current chi2=1.8494962483841815 (change=0.21593488427547716 %)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,513 | INFO     | right removable region: 175
[2025-10-19 05:36:35] 2025-10-19 04:35:51,513 | INFO     | sum of square deviations: 1690478688.7272737
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | sum of deviations: -49874258156.63633
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | mean x: 1760843136.6363637
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | mean y: 2434267.4431818184
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | -- intersect: 51952657453.07925
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | intersect: 51952657453.07925
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | chi2: 0.38762272926632013
[2025-10-19 05:36:35] 2025-10-19 04:35:51,515 | INFO     | current chi2=0.38762272926632013 (change=79.08696938896902 %)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,516 | INFO     | sum of square deviations: 1550450138.6315835
[2025-10-19 05:36:35] 2025-10-19 04:35:51,517 | INFO     | sum of deviations: -42596157737.77191
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | mean x: 1760843289.1403508
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | mean y: 2426315.5321637425
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | -- intersect: 48378802070.458755
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | intersect: 48378802070.458755
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | chi2: 0.3738158281798401
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | current chi2=0.3738158281798401 (change=3.561943107054968 %)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,518 | INFO     | left removable region: 20
[2025-10-19 05:36:35] 2025-10-19 04:35:51,519 | INFO     | sum of square deviations: 1154678722.2838676
[2025-10-19 05:36:35] 2025-10-19 04:35:51,520 | INFO     | sum of deviations: -24188643047.89031
[2025-10-19 05:36:35] 2025-10-19 04:35:51,520 | INFO     | mean x: 1760843411.1548388
[2025-10-19 05:36:35] 2025-10-19 04:35:51,520 | INFO     | mean y: 2406978.787096774
[2025-10-19 05:36:35] 2025-10-19 04:35:51,520 | INFO     | -- intersect: 36889215329.606415
[2025-10-19 05:36:35] 2025-10-19 04:35:51,520 | INFO     | intersect: 36889215329.606415
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | chi2: 0.29721118540089225
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | -- intersect: 36889215329.606415
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | current memory leak: -20.95 B/s (using 155 data points, chi2=0.30)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | could have reported an average CPU frequency of 3200 MHz (10 samples)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | ..............................
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | . Timing measurements:
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | . get job = 0 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | . initial setup = 5 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,521 | INFO     | . payload setup = 6 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,522 | INFO     | . stage-in = 0 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,522 | INFO     | . payload execution = 11035 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,522 | INFO     | . stage-out = 18 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,522 | INFO     | . log creation = 0 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,522 | INFO     | ..............................
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | 
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | job summary report
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | --------------------------------------------------
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | PanDA job id: 6848035309
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | task id: 46771637
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | errors: (none)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | pilot state: finished 
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | transexitcode: 0
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | exeerrorcode: 0
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | exeerrordiag: 
[2025-10-19 05:36:35] 2025-10-19 04:35:51,624 | INFO     | exitcode: 0
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | exitmsg: OK
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | cpuconsumptiontime: 42572 s
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | nevents: 400
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | neventsw: 0
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | pid: 14755
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | pgrp: 14755
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | corecount: 4
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | event service: False
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | sizes: {0: 2348928, 1: 2348928, 3: 2349218, 11: 2349246, 11045: 2378585, 11063: 2387581, 11065: 2387765, 11068: 2387789}
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | --------------------------------------------------
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | 
[2025-10-19 05:36:35] 2025-10-19 04:35:51,625 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-19 05:36:35] 2025-10-19 04:35:51,633 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | job 6848035309 has completed (purged errors)
[2025-10-19 05:36:35] 2025-10-19 04:35:51,635 | INFO     | overall cleanup function is called
[2025-10-19 05:36:35] 2025-10-19 04:35:52,642 | INFO     | --- collectZombieJob: --- 10, [14755]
[2025-10-19 05:36:35] 2025-10-19 04:35:52,642 | INFO     | zombie collector waiting for pid 14755
[2025-10-19 05:36:35] 2025-10-19 04:35:52,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 05:36:35] 2025-10-19 04:35:52,643 | INFO     | collected zombie processes
[2025-10-19 05:36:35] 2025-10-19 04:35:52,643 | INFO     | will attempt to kill all subprocesses of pid=14755
[2025-10-19 05:36:35] 2025-10-19 04:35:52,721 | INFO     | process IDs to be killed: [14755] (in reverse order)
[2025-10-19 05:36:35] 2025-10-19 04:35:52,748 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 05:36:35] 2025-10-19 04:35:52,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 05:36:35] 2025-10-19 04:35:52,750 | INFO     | did not find any defunct processes belonging to 14755
[2025-10-19 05:36:35] 2025-10-19 04:35:52,752 | INFO     | did not find any defunct processes belonging to 14755
[2025-10-19 05:36:35] 2025-10-19 04:35:52,752 | INFO     | ready for new job
[2025-10-19 05:36:35] 2025-10-19 04:35:52,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 05:36:35] 2025-10-19 04:35:52,753 | INFO     | ***************************************
[2025-10-19 05:36:35] 2025-10-19 04:35:52,754 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 05:36:35] 2025-10-19 04:35:52,754 | INFO     | ***************************************
[2025-10-19 05:36:35] 2025-10-19 04:35:52,754 | INFO     | 
[2025-10-19 05:36:35] 2025-10-19 04:35:52,774 | INFO     | architecture information:
[2025-10-19 05:36:35] 2025-10-19 04:35:52,774 | INFO     | executing command: cat /etc/os-release
[2025-10-19 05:36:35] 2025-10-19 04:35:52,781 | INFO     | cat /etc/os-release:
[2025-10-19 05:36:35] NAME="CentOS Linux"
[2025-10-19 05:36:35] VERSION="7 (Core)"
[2025-10-19 05:36:35] ID="centos"
[2025-10-19 05:36:35] ID_LIKE="rhel fedora"
[2025-10-19 05:36:35] VERSION_ID="7"
[2025-10-19 05:36:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 05:36:35] ANSI_COLOR="0;31"
[2025-10-19 05:36:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 05:36:35] HOME_URL="https://www.centos.org/"
[2025-10-19 05:36:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 05:36:35] 
[2025-10-19 05:36:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 05:36:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 05:36:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 05:36:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 05:36:35] 
[2025-10-19 05:36:35] 2025-10-19 04:35:52,781 | INFO     | ***************************************
[2025-10-19 05:36:35] 2025-10-19 04:35:53,285 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-19 05:36:35] 2025-10-19 04:35:53,294 | INFO     | sufficient remaining disk space (414535647232 B)
[2025-10-19 05:36:35] 2025-10-19 04:35:53,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 05:36:35] 2025-10-19 04:35:53,295 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 05:36:35] 2025-10-19 04:35:53,295 | INFO     | update_server=False
[2025-10-19 05:36:35] 2025-10-19 04:35:53,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 05:36:35] 2025-10-19 04:35:53,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:36:35] 2025-10-19 04:35:53,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 05:36:35] 2025-10-19 04:35:53,360 | INFO     | all payload control threads have been joined
[2025-10-19 05:36:35] 2025-10-19 04:35:53,662 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 05:36:35] 2025-10-19 04:35:53,662 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 05:36:35] 2025-10-19 04:35:53,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:36:35] 2025-10-19 04:35:53,663 | INFO     | will abort loop
[2025-10-19 05:36:35] 2025-10-19 04:35:53,792 | INFO     | all job control threads have been joined
[2025-10-19 05:36:35] 2025-10-19 04:35:53,793 | INFO     | all data control threads have been joined
[2025-10-19 05:36:35] 2025-10-19 04:35:54,302 | INFO     | [job] retrieve thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,302 | INFO     | [job] queue monitor thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,361 | INFO     | [payload] control thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,517 | INFO     | [data] copytool_in thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 05:36:35] 2025-10-19 04:35:54,637 | INFO     | [job] validate thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,669 | INFO     | [job] job monitor thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,798 | INFO     | [job] control thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:54,799 | INFO     | [data] control thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,201 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,302 | INFO     | [data] copytool_out thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,308 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,314 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,564 | INFO     | [payload] validate_post thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:55,852 | INFO     | [payload] failed_post thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:35:58,561 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 05:36:35] 2025-10-19 04:36:23,479 | INFO     | PID=8388 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-19 05:36:35] 2025-10-19 04:36:23,480 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 05:36:35] 2025-10-19 04:36:23,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 05:36:35] 2025-10-19 04:36:23,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 05:36:35] 2025-10-19 04:36:28,360 | INFO     | [monitor] cgroup control has ended
[2025-10-19 05:36:35] 2025-10-19 04:36:29,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024027506496)>', '<ExcThread(monitor, started 140023441647360)>']
[2025-10-19 05:36:35] 2025-10-19 04:36:30,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 05:36:35] 2025-10-19 04:36:30,518 | INFO     | [monitor] control thread has ended
[2025-10-19 05:36:35] 2025-10-19 04:36:34,925 | INFO     | all workflow threads have been joined
[2025-10-19 05:36:35] 2025-10-19 04:36:34,926 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 05:36:35] 2025-10-19 04:36:34,926 | INFO     | traces error code: 0
[2025-10-19 05:36:35] 2025-10-19 04:36:34,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 05:36:35] 2025-10-19 04:36:35,044 [wrapper] ==== pilot stdout END ====
[2025-10-19 05:36:35] 2025-10-19 04:36:35,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 05:36:35] 2025-10-19 04:36:35,048 [wrapper] pilotpid: 8388
[2025-10-19 05:36:35] 2025-10-19 04:36:35,049 [wrapper] Pilot exit status: 0
[2025-10-19 05:36:35] 2025-10-19 04:36:35,063 [wrapper] pandaids: 6848035309
[2025-10-19 05:36:35] 2025-10-19 04:36:35,079 [wrapper] cleanup supervisor_pilot  1698 8389
[2025-10-19 05:36:35] 2025-10-19 04:36:35,081 [wrapper] Test setup, not cleaning
[2025-10-19 05:36:35] 2025-10-19 04:36:35,083 [wrapper] apfmon messages muted
[2025-10-19 05:36:35] 2025-10-19 04:36:35,085 [wrapper] ==== wrapper stdout END ====
[2025-10-19 05:36:35] 2025-10-19 04:36:35,087 [wrapper] ==== wrapper stderr END ====
[2025-10-19 05:36:35]  *** Error codes and diagnostics ***
[2025-10-19 05:36:35]     "exeErrorCode": 0,
[2025-10-19 05:36:35]     "exeErrorDiag": "",
[2025-10-19 05:36:35]     "pilotErrorCode": 0,
[2025-10-19 05:36:35]     "pilotErrorDiag": "",
[2025-10-19 05:36:35]  *** Listing of results directory ***
[2025-10-19 05:36:35] total 439896
[2025-10-19 05:36:35] -rw-r--r-- 1 m m    557409 Oct 18 12:48 pilot3.tar.gz
[2025-10-19 05:36:35] -rw-r--r-- 1 m m      5112 Oct 18 13:06 queuedata.json
[2025-10-19 05:36:35] -rwx------ 1 m m     36292 Oct 18 13:07 runpilot2-wrapper.sh
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m       100 Oct 19 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 05:36:35] -rwxr-xr-x 1 m m      7986 Oct 19 02:30 run_atlas
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m       105 Oct 19 02:30 job.xml
[2025-10-19 05:36:35] -rw-r--r-- 2 m m     15120 Oct 19 02:30 start_atlas.sh
[2025-10-19 05:36:35] drwxrwx--x 2 m m      4096 Oct 19 02:30 shared
[2025-10-19 05:36:35] -rw-r--r-- 2 m m    569676 Oct 19 02:30 input.tar.gz
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m      6035 Oct 19 02:30 init_data.xml
[2025-10-19 05:36:35] -rw-r--r-- 2 m m 231038996 Oct 19 02:30 EVNT.46771634._001816.pool.root.1
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m         0 Oct 19 02:30 boinc_lockfile
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m      2558 Oct 19 02:30 pandaJob.out
[2025-10-19 05:36:35] -rw------- 1 m m    976750 Oct 19 02:31 agis_schedconf.cvmfs.json
[2025-10-19 05:36:35] drwx------ 5 m m      4096 Oct 19 02:31 pilot3
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m       530 Oct 19 05:34 boinc_task_state.xml
[2025-10-19 05:36:35] -rw------- 1 m m 211693772 Oct 19 05:34 HITS.46771637._042954.pool.root.1
[2025-10-19 05:36:35] -rw------- 1 m m      1042 Oct 19 05:35 memory_monitor_summary.json
[2025-10-19 05:36:35] -rw------- 1 m m   1560740 Oct 19 05:35 agis_ddmendpoints.agis.ALL.json
[2025-10-19 05:36:35] -rw------- 1 m m    355457 Oct 19 05:35 log.46771637._042954.job.log.tgz.1
[2025-10-19 05:36:35] -rw------- 1 m m      7786 Oct 19 05:35 heartbeat.json
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m        28 Oct 19 05:36 wrapper_checkpoint.txt
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m      8192 Oct 19 05:36 boinc_mmap_file
[2025-10-19 05:36:35] -rw------- 1 m m        95 Oct 19 05:36 pilot_heartbeat.json
[2025-10-19 05:36:35] -rw------- 1 m m      4931 Oct 19 05:36 pilotlog.txt
[2025-10-19 05:36:35] -rw------- 1 m m   1548434 Oct 19 05:36 log.46771637._042954.job.log.1
[2025-10-19 05:36:35] -rw------- 1 m m       357 Oct 19 05:36 output.list
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m       620 Oct 19 05:36 runtime_log
[2025-10-19 05:36:35] -rw------- 1 m m   1925120 Oct 19 05:36 result.tar.gz
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m      8618 Oct 19 05:36 runtime_log.err
[2025-10-19 05:36:35] -rw------- 1 m m       645 Oct 19 05:36 CqsNDmltKU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmN8bMDm9HUEin.diag
[2025-10-19 05:36:35] -rw-rw-r-- 1 m m     20846 Oct 19 05:36 stderr.txt
[2025-10-19 05:36:35] HITS file was successfully produced:
[2025-10-19 05:36:35] -rw------- 1 m m 211693772 Oct 19 05:34 shared/HITS.pool.root.1
[2025-10-19 05:36:35]  *** Contents of shared directory: ***
[2025-10-19 05:36:35] total 434828
[2025-10-19 05:36:35] -rw-r--r-- 2 m m     15120 Oct 19 02:30 start_atlas.sh
[2025-10-19 05:36:35] -rw-r--r-- 2 m m    569676 Oct 19 02:30 input.tar.gz
[2025-10-19 05:36:35] -rw-r--r-- 2 m m 231038996 Oct 19 02:30 ATLAS.root_0
[2025-10-19 05:36:35] -rw------- 1 m m 211693772 Oct 19 05:34 HITS.pool.root.1
[2025-10-19 05:36:35] -rw------- 1 m m   1925120 Oct 19 05:36 result.tar.gz
05:36:36 (4073): run_atlas exited; CPU time 42685.566384
05:36:36 (4073): called boinc_finish(0)

</stderr_txt>
]]>

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