Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:22:47 (640041): wrapper (7.7.26015): starting
16:22:47 (640041): wrapper: running run_atlas (--nthreads 12)
[2025-10-19 16:22:47] Arguments: --nthreads 12
[2025-10-19 16:22:47] Threads: 12
[2025-10-19 16:22:47] Checking for CVMFS
[2025-10-19 16:22:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 16:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 16:22:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 16:22:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 16:22:48] 2.11.4.0 4025 592 100848 151890 1 57 2571134 4096001 912 130560 0 1962097 99.998 20989 470 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-19 16:22:48] CVMFS is ok
[2025-10-19 16:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 16:22:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-19 16:22:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-19 16:22:48] Further information can be found at the LHC@home message board.
[2025-10-19 16:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 16:22:48] Checking for apptainer binary...
[2025-10-19 16:22:48] which: no apptainer in (/home/ti-kako/.local/bin:/home/ti-kako/bin:/usr/lib64/ccache:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-19 16:22:48] apptainer is not installed, using version from CVMFS
[2025-10-19 16:22:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 16:22:49] sonata
[2025-10-19 16:22:49] apptainer works
[2025-10-19 16:22:49] Set ATHENA_PROC_NUMBER=12
[2025-10-19 16:22:49] Set ATHENA_CORE_NUMBER=12
[2025-10-19 16:22:49] Starting ATLAS job with PandaID=6848040647
[2025-10-19 16:22:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 17:08:07]  *** The last 200 lines of the pilot log: ***
[2025-10-19 17:08:07] 2025-10-19 15:06:51,671 | INFO     | transferring file log.46771637._045372.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6848040647/log.46771637._045372.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-19 17:08:07] 2025-10-19 15:06:51,671 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6848040647/log.46771637._045372.job.log.tgz.1 /var/lib/boinc/slots/2/log.46771637._045372.job
[2025-10-19 17:08:07] 2025-10-19 15:06:51,687 | INFO     | adding to output.list: log.46771637._045372.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/aa/log.46771637._045372.job.log.tg
[2025-10-19 17:08:07] 2025-10-19 15:06:51,687 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 17:08:07] 2025-10-19 15:06:51,688 | INFO     | summary of transferred files:
[2025-10-19 17:08:07] 2025-10-19 15:06:51,688 | INFO     |  -- lfn=log.46771637._045372.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 17:08:07] 2025-10-19 15:06:51,688 | INFO     | stage-out finished correctly
[2025-10-19 17:08:07] 2025-10-19 15:06:53,484 | INFO     | time since job start (2636s) is within the limit (172800.0s)
[2025-10-19 17:08:07] 2025-10-19 15:06:53,863 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 17:08:07] 2025-10-19 15:06:53,992 | WARNING  | process 650528 can no longer be monitored (due to stat problems) - aborting
[2025-10-19 17:08:07] 2025-10-19 15:06:53,993 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6848040647/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 17:08:07] 2025-10-19 15:06:54,147 | INFO     | number of running child processes to parent process 650528: 1
[2025-10-19 17:08:07] 2025-10-19 15:06:54,147 | INFO     | maximum number of monitored processes: 6
[2025-10-19 17:08:07] 2025-10-19 15:06:55,489 | INFO     | time since job start (2638s) is within the limit (172800.0s)
[2025-10-19 17:08:07] 2025-10-19 15:06:55,611 | INFO     | job 6848040647 has state=finished
[2025-10-19 17:08:07] 2025-10-19 15:06:55,611 | INFO     | preparing for final server update for job 6848040647 in state='finished'
[2025-10-19 17:08:07] 2025-10-19 15:06:55,612 | INFO     | this job has now completed (state=finished)
[2025-10-19 17:08:07] 2025-10-19 15:06:55,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 17:08:07] 2025-10-19 15:06:55,612 | INFO     | log transfer has been attempted: DONE
[2025-10-19 17:08:07] 2025-10-19 15:06:55,612 | INFO     | job 6848040647 has finished - writing final server update
[2025-10-19 17:08:07] 2025-10-19 15:06:55,612 | INFO     | total number of processed events: 400 (read)
[2025-10-19 17:08:07] 2025-10-19 15:06:55,614 | INFO     | executing command: lscpu
[2025-10-19 17:08:07] 2025-10-19 15:06:55,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 17:08:07] 2025-10-19 15:06:56,650 | INFO     | monitor loop #201: job 0:6848040647 is in state 'finished'
[2025-10-19 17:08:07] 2025-10-19 15:06:56,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 17:08:07] 2025-10-19 15:06:57,494 | INFO     | time since job start (2640s) is within the limit (172800.0s)
[2025-10-19 17:08:07] 2025-10-19 15:06:59,154 | INFO     | monitor loop #202: job 0:6848040647 is in state 'finished'
[2025-10-19 17:08:07] 2025-10-19 15:06:59,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 17:08:07] 2025-10-19 15:06:59,499 | INFO     | time since job start (2642s) is within the limit (172800.0s)
[2025-10-19 17:08:07] 2025-10-19 15:07:01,504 | INFO     | time since job start (2644s) is within the limit (172800.0s)
[2025-10-19 17:08:07] 2025-10-19 15:07:01,657 | INFO     | monitor loop #203: job 0:6848040647 is in state 'finished'
[2025-10-19 17:08:07] 2025-10-19 15:07:01,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 17:08:07] 2025-10-19 15:07:03,509 | INFO     | time since job start (2646s) is within the limit (172800.0s)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,035 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 17:08:07] 2025-10-19 15:07:04,039 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3518.5417187500007
[2025-10-19 17:08:07] 2025-10-19 15:07:04,044 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6848040647/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,044 | INFO     | extracted standard info from prmon json
[2025-10-19 17:08:07] 2025-10-19 15:07:04,044 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 17:08:07] 2025-10-19 15:07:04,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 17:08:07] 2025-10-19 15:07:04,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 17:08:07] 2025-10-19 15:07:04,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 17:08:07] 2025-10-19 15:07:04,045 | INFO     | fitting pss+swap vs Time
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | sum of square deviations: 14456085.0
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | sum of deviations: -1737948865.0
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | mean x: 1760885172.5
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | mean y: 2991208.888888889
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | -- intersect: 211701275145.49442
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | intersect: 211701275145.49442
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | chi2: 0.012178369774181713
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | -- intersect: 211701275145.49442
[2025-10-19 17:08:07] 2025-10-19 15:07:04,046 | INFO     | current memory leak: -120.22 B/s (using 36 data points, chi2=0.01)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | could have reported an average CPU frequency of 3573 MHz (5 samples)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | ..............................
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . Timing measurements:
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . get job = 0 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . initial setup = 1 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . payload setup = 4 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . stage-in = 0 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . payload execution = 2610 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . stage-out = 0 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | . log creation = 0 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,047 | INFO     | ..............................
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | 
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | job summary report
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | --------------------------------------------------
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | PanDA job id: 6848040647
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | task id: 46771637
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | errors: (none)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | pilot state: finished 
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | transexitcode: 0
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | exeerrorcode: 0
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | exeerrordiag: 
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | exitcode: 0
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | exitmsg: OK
[2025-10-19 17:08:07] 2025-10-19 15:07:04,120 | INFO     | cpuconsumptiontime: 28509 s
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | nevents: 400
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | neventsw: 0
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | pid: 650528
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | pgrp: 650528
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | corecount: 12
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | event service: False
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | sizes: {0: 2348929, 3: 2349191, 11: 2349219, 2618: 2374467, 2620: 2383465, 2622: 2383521, 2632: 2383875}
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | --------------------------------------------------
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | 
[2025-10-19 17:08:07] 2025-10-19 15:07:04,121 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | job 6848040647 has completed (purged errors)
[2025-10-19 17:08:07] 2025-10-19 15:07:04,139 | INFO     | overall cleanup function is called
[2025-10-19 17:08:07] 2025-10-19 15:07:04,661 | INFO     | PID=643876 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-19 17:08:07] 2025-10-19 15:07:04,661 | INFO     | .. there are 2 such processes running
[2025-10-19 17:08:07] 2025-10-19 15:07:05,147 | INFO     | --- collectZombieJob: --- 10, [650528]
[2025-10-19 17:08:07] 2025-10-19 15:07:05,147 | INFO     | zombie collector waiting for pid 650528
[2025-10-19 17:08:07] 2025-10-19 15:07:05,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 17:08:07] 2025-10-19 15:07:05,147 | INFO     | collected zombie processes
[2025-10-19 17:08:07] 2025-10-19 15:07:05,147 | INFO     | will attempt to kill all subprocesses of pid=650528
[2025-10-19 17:08:07] 2025-10-19 15:07:05,299 | INFO     | process IDs to be killed: [650528] (in reverse order)
[2025-10-19 17:08:07] 2025-10-19 15:07:05,386 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 17:08:07] 2025-10-19 15:07:05,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 17:08:07] 2025-10-19 15:07:05,391 | INFO     | did not find any defunct processes belonging to 650528
[2025-10-19 17:08:07] 2025-10-19 15:07:05,394 | INFO     | did not find any defunct processes belonging to 650528
[2025-10-19 17:08:07] 2025-10-19 15:07:05,394 | INFO     | ready for new job
[2025-10-19 17:08:07] 2025-10-19 15:07:05,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 17:08:07] 2025-10-19 15:07:05,396 | INFO     | ***************************************
[2025-10-19 17:08:07] 2025-10-19 15:07:05,396 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 17:08:07] 2025-10-19 15:07:05,396 | INFO     | ***************************************
[2025-10-19 17:08:07] 2025-10-19 15:07:05,396 | INFO     | 
[2025-10-19 17:08:07] 2025-10-19 15:07:05,397 | INFO     | architecture information:
[2025-10-19 17:08:07] 2025-10-19 15:07:05,398 | INFO     | executing command: cat /etc/os-release
[2025-10-19 17:08:07] 2025-10-19 15:07:05,410 | INFO     | cat /etc/os-release:
[2025-10-19 17:08:07] NAME="CentOS Linux"
[2025-10-19 17:08:07] VERSION="7 (Core)"
[2025-10-19 17:08:07] ID="centos"
[2025-10-19 17:08:07] ID_LIKE="rhel fedora"
[2025-10-19 17:08:07] VERSION_ID="7"
[2025-10-19 17:08:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 17:08:07] ANSI_COLOR="0;31"
[2025-10-19 17:08:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 17:08:07] HOME_URL="https://www.centos.org/"
[2025-10-19 17:08:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 17:08:07] 
[2025-10-19 17:08:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 17:08:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 17:08:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 17:08:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 17:08:07] 
[2025-10-19 17:08:07] 2025-10-19 15:07:05,411 | INFO     | ***************************************
[2025-10-19 17:08:07] 2025-10-19 15:07:05,913 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-19 17:08:07] 2025-10-19 15:07:05,928 | INFO     | sufficient remaining disk space (972964233216 B)
[2025-10-19 17:08:07] 2025-10-19 15:07:05,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 17:08:07] 2025-10-19 15:07:05,929 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 17:08:07] 2025-10-19 15:07:05,929 | INFO     | update_server=False
[2025-10-19 17:08:07] 2025-10-19 15:07:05,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 17:08:07] 2025-10-19 15:07:05,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 17:08:07] 2025-10-19 15:07:05,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 17:08:07] 2025-10-19 15:07:05,929 | INFO     | aborting loop
[2025-10-19 17:08:07] 2025-10-19 15:07:06,083 | INFO     | all data control threads have been joined
[2025-10-19 17:08:07] 2025-10-19 15:07:06,675 | INFO     | all payload control threads have been joined
[2025-10-19 17:08:07] 2025-10-19 15:07:06,934 | INFO     | [job] retrieve thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:06,934 | INFO     | [job] job monitor thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:06,934 | INFO     | [job] queue monitor thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:06,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,084 | INFO     | [data] control thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,193 | INFO     | [payload] validate_post thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 17:08:07] 2025-10-19 15:07:07,331 | INFO     | all job control threads have been joined
[2025-10-19 17:08:07] 2025-10-19 15:07:07,423 | INFO     | [job] validate thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,615 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,680 | INFO     | [payload] control thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,687 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:07,974 | INFO     | [data] copytool_in thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:08,027 | INFO     | [payload] failed_post thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:08,336 | INFO     | [job] control thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:08,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 17:08:07] 2025-10-19 15:07:09,266 | INFO     | [data] copytool_out thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:12,950 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 17:08:07] 2025-10-19 15:07:36,899 | INFO     | PID=643876 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-19 17:08:07] 2025-10-19 15:07:36,899 | INFO     | .. there are 2 such processes running
[2025-10-19 17:08:07] 2025-10-19 15:07:36,899 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 17:08:07] 2025-10-19 15:07:36,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 17:08:07] 2025-10-19 15:07:36,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 17:08:07] 2025-10-19 15:07:55,585 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-19 17:08:07] 2025-10-19 15:08:01,636 | INFO     | [monitor] cgroup control has ended
[2025-10-19 17:08:07] 2025-10-19 15:08:02,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502054123328)>', '<ExcThread(monitor, started 140501508409088)>']
[2025-10-19 17:08:07] 2025-10-19 15:08:03,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 17:08:07] 2025-10-19 15:08:03,030 | INFO     | [monitor] control thread has ended
[2025-10-19 17:08:07] 2025-10-19 15:08:07,416 | INFO     | all workflow threads have been joined
[2025-10-19 17:08:07] 2025-10-19 15:08:07,416 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 17:08:07] 2025-10-19 15:08:07,417 | INFO     | traces error code: 0
[2025-10-19 17:08:07] 2025-10-19 15:08:07,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 17:08:07] 2025-10-19 15:08:07,494 [wrapper] ==== pilot stdout END ====
[2025-10-19 17:08:07] 2025-10-19 15:08:07,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 17:08:07] 2025-10-19 15:08:07,499 [wrapper] pilotpid: 643876
[2025-10-19 17:08:07] 2025-10-19 15:08:07,501 [wrapper] Pilot exit status: 0
[2025-10-19 17:08:07] 2025-10-19 15:08:07,509 [wrapper] pandaids: 6848040647
[2025-10-19 17:08:07] 2025-10-19 15:08:07,546 [wrapper] cleanup supervisor_pilot  685009 643877
[2025-10-19 17:08:07] 2025-10-19 15:08:07,549 [wrapper] Test setup, not cleaning
[2025-10-19 17:08:07] 2025-10-19 15:08:07,551 [wrapper] apfmon messages muted
[2025-10-19 17:08:07] 2025-10-19 15:08:07,553 [wrapper] ==== wrapper stdout END ====
[2025-10-19 17:08:07] 2025-10-19 15:08:07,555 [wrapper] ==== wrapper stderr END ====
[2025-10-19 17:08:07]  *** Error codes and diagnostics ***
[2025-10-19 17:08:07]     "exeErrorCode": 0,
[2025-10-19 17:08:07]     "exeErrorDiag": "",
[2025-10-19 17:08:07]     "pilotErrorCode": 0,
[2025-10-19 17:08:07]     "pilotErrorDiag": "",
[2025-10-19 17:08:07]  *** Listing of results directory ***
[2025-10-19 17:08:07] total 431264
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako    557409 18 oct.  18:53 pilot3.tar.gz
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako      5112 18 oct.  19:18 queuedata.json
[2025-10-19 17:08:07] -rwx------ 1 ti-kako ti-kako     36292 18 oct.  19:19 runpilot2-wrapper.sh
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako       100 19 oct.  16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 17:08:07] -rwxr-xr-x 1 ti-kako ti-kako      7986 19 oct.  16:22 run_atlas
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako       105 19 oct.  16:22 job.xml
[2025-10-19 17:08:07] -rw-r--r-- 2 ti-kako ti-kako 229541257 19 oct.  16:22 EVNT.46771634._001913.pool.root.1
[2025-10-19 17:08:07] drwxrwx--x 1 ti-kako ti-kako        76 19 oct.  16:22 shared
[2025-10-19 17:08:07] -rw-r--r-- 2 ti-kako ti-kako    569673 19 oct.  16:22 input.tar.gz
[2025-10-19 17:08:07] -rw-r--r-- 2 ti-kako ti-kako     15120 19 oct.  16:22 start_atlas.sh
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako         0 19 oct.  16:22 boinc_setup_complete
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako      8914 19 oct.  16:22 init_data.xml
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako         0 19 oct.  16:22 boinc_lockfile
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako      2558 19 oct.  16:22 pandaJob.out
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako    976750 19 oct.  16:22 agis_schedconf.cvmfs.json
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako   1560740 19 oct.  16:22 agis_ddmendpoints.agis.ALL.json
[2025-10-19 17:08:07] drwx------ 1 ti-kako ti-kako       414 19 oct.  16:22 pilot3
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako 206639433 19 oct.  17:06 HITS.46771637._045372.pool.root.1
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako      1017 19 oct.  17:06 memory_monitor_summary.json
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako    352179 19 oct.  17:06 log.46771637._045372.job.log.tgz.1
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako       529 19 oct.  17:06 boinc_task_state.xml
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako      7742 19 oct.  17:07 heartbeat.json
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako        95 19 oct.  17:07 pilot_heartbeat.json
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako      8192 19 oct.  17:07 boinc_mmap_file
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako        27 19 oct.  17:07 wrapper_checkpoint.txt
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako      4823 19 oct.  17:08 pilotlog.txt
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako    419278 19 oct.  17:08 log.46771637._045372.job.log.1
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako       357 19 oct.  17:08 output.list
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako       620 19 oct.  17:08 runtime_log
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako    788480 19 oct.  17:08 result.tar.gz
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako       638 19 oct.  17:08 WN9LDm2lPU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEyxNDmHxDben.diag
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako      8645 19 oct.  17:08 runtime_log.err
[2025-10-19 17:08:07] -rw-r--r-- 1 ti-kako ti-kako     22745 19 oct.  17:08 stderr.txt
[2025-10-19 17:08:07] HITS file was successfully produced:
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako 206639433 19 oct.  17:06 shared/HITS.pool.root.1
[2025-10-19 17:08:07]  *** Contents of shared directory: ***
[2025-10-19 17:08:07] total 427312
[2025-10-19 17:08:07] -rw-r--r-- 2 ti-kako ti-kako 229541257 19 oct.  16:22 ATLAS.root_0
[2025-10-19 17:08:07] -rw-r--r-- 2 ti-kako ti-kako    569673 19 oct.  16:22 input.tar.gz
[2025-10-19 17:08:07] -rw-r--r-- 2 ti-kako ti-kako     15120 19 oct.  16:22 start_atlas.sh
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako 206639433 19 oct.  17:06 HITS.pool.root.1
[2025-10-19 17:08:07] -rw------- 1 ti-kako ti-kako    788480 19 oct.  17:08 result.tar.gz
17:08:08 (640041): run_atlas exited; CPU time 28541.351401
17:08:08 (640041): called boinc_finish(0)

</stderr_txt>
]]>

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