Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:14 (2004216): wrapper (7.7.26015): starting
12:29:14 (2004216): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 12:29:14] Arguments: --nthreads 4
[2025-10-19 12:29:14] Threads: 4
[2025-10-19 12:29:14] Checking for CVMFS
[2025-10-19 12:29:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 12:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 12:29:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 12:29:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 12:29:15] 2.9.2.0 1035642 2563 89840 151884 3 57 31072372 36864000 0 130560 0 2524886 99.993 86125 2200 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 12:29:15] CVMFS is ok
[2025-10-19 12:29:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 12:29:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 12:29:15] Further information can be found at the LHC@home message board.
[2025-10-19 12:29:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 12:29:15] Checking for apptainer binary...
[2025-10-19 12:29:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 12:29:15] Running /usr/bin/apptainer --version
[2025-10-19 12:29:15] apptainer version 1.4.1-1.1
[2025-10-19 12:29:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 12:29:15] thA317a
[2025-10-19 12:29:15] apptainer works
[2025-10-19 12:29:15] Set ATHENA_PROC_NUMBER=4
[2025-10-19 12:29:15] Set ATHENA_CORE_NUMBER=4
[2025-10-19 12:29:15] Starting ATLAS job with PandaID=6848041815
[2025-10-19 12:29:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 13:35:39]  *** The last 200 lines of the pilot log: ***
[2025-10-19 13:35:39] 2025-10-19 11:35:20,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 13:35:39] 2025-10-19 11:35:20,971 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-19 13:35:39] 2025-10-19 11:35:20,971 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 13:35:39] 2025-10-19 11:35:20,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 13:35:39] 2025-10-19 11:35:20,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 13:35:39] 2025-10-19 11:35:20,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 13:35:39] 2025-10-19 11:35:21,045 | INFO     | all payload control threads have been joined
[2025-10-19 13:35:39] 2025-10-19 11:35:21,410 | INFO     | all data control threads have been joined
[2025-10-19 13:35:39] 2025-10-19 11:35:21,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 13:35:39] 2025-10-19 11:35:21,580 | INFO     | aborting loop
[2025-10-19 13:35:39] 2025-10-19 11:35:21,976 | INFO     | [job] retrieve thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:21,976 | INFO     | [job] queue monitor thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,016 | INFO     | [payload] validate_post thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,051 | INFO     | [payload] control thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,416 | INFO     | [data] control thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,533 | INFO     | all job control threads have been joined
[2025-10-19 13:35:39] 2025-10-19 11:35:22,585 | INFO     | [job] job monitor thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 13:35:39] 2025-10-19 11:35:22,896 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,932 | INFO     | [data] copytool_in thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:22,977 | INFO     | [data] copytool_out thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:23,100 | INFO     | [payload] failed_post thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:23,247 | INFO     | [job] validate thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:23,304 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:23,375 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:23,539 | INFO     | [job] control thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:25,533 | INFO     | [monitor] cgroup control has ended
[2025-10-19 13:35:39] 2025-10-19 11:35:26,855 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:31,393 | INFO     | job.realtimelogging is not enabled
[2025-10-19 13:35:39] 2025-10-19 11:35:32,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 13:35:39] 2025-10-19 11:35:34,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489911969600)>', '<ExcThread(monitor, started 140489554638592)>']
[2025-10-19 13:35:39] 2025-10-19 11:35:35,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 13:35:39] 2025-10-19 11:35:35,045 | INFO     | [monitor] control thread has ended
[2025-10-19 13:35:39] 2025-10-19 11:35:39,299 | INFO     | all workflow threads have been joined
[2025-10-19 13:35:39] 2025-10-19 11:35:39,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 13:35:39] 2025-10-19 11:35:39,299 | INFO     | traces error code: 0
[2025-10-19 13:35:39] 2025-10-19 11:35:39,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 13:35:39] 2025-10-19 11:35:39,346 [wrapper] ==== pilot stdout END ====
[2025-10-19 13:35:39] 2025-10-19 11:35:39,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 13:35:39] 2025-10-19 11:35:39,351 [wrapper] pilotpid: 2008014
[2025-10-19 13:35:39] 2025-10-19 11:35:39,354 [wrapper] Pilot exit status: 0
[2025-10-19 13:35:39] 2025-10-19 11:35:39,361 [wrapper] pandaids: 6848041815
[2025-10-19 13:35:39] 2025-10-19 11:35:39,379 [wrapper] cleanup supervisor_pilot 2024328 2008015
[2025-10-19 13:35:39] 2025-10-19 11:35:39,381 [wrapper] Test setup, not cleaning
[2025-10-19 13:35:39] 2025-10-19 11:35:39,384 [wrapper] apfmon messages muted
[2025-10-19 13:35:39] 2025-10-19 11:35:39,386 [wrapper] ==== wrapper stdout END ====
[2025-10-19 13:35:39] 2025-10-19 11:35:39,389 [wrapper] ==== wrapper stderr END ====
[2025-10-19 13:35:39]  *** Error codes and diagnostics ***
[2025-10-19 13:35:39]     "exeErrorCode": 0,
[2025-10-19 13:35:39]     "exeErrorDiag": "",
[2025-10-19 13:35:39]     "pilotErrorCode": 0,
[2025-10-19 13:35:39]     "pilotErrorDiag": "",
[2025-10-19 13:35:39]  *** Listing of results directory ***
[2025-10-19 13:35:39] total 432956
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc    557409 Oct 18 20:21 pilot3.tar.gz
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc      5112 Oct 18 20:30 queuedata.json
[2025-10-19 13:35:39] -rwx------ 1 boinc boinc     36292 Oct 18 20:30 runpilot2-wrapper.sh
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc       100 Oct 19 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 13:35:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 12:29 run_atlas
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc       105 Oct 19 12:29 job.xml
[2025-10-19 13:35:39] -rw-r--r-- 2 boinc boinc 228867785 Oct 19 12:29 EVNT.46771634._001950.pool.root.1
[2025-10-19 13:35:39] drwxrwx--x 2 boinc boinc      4096 Oct 19 12:29 shared
[2025-10-19 13:35:39] -rw-r--r-- 2 boinc boinc    569674 Oct 19 12:29 input.tar.gz
[2025-10-19 13:35:39] -rw-r--r-- 2 boinc boinc     15120 Oct 19 12:29 start_atlas.sh
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc         0 Oct 19 12:29 boinc_setup_complete
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc      6440 Oct 19 12:29 init_data.xml
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc         0 Oct 19 12:29 boinc_lockfile
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc      2558 Oct 19 12:29 pandaJob.out
[2025-10-19 13:35:39] -rw------- 1 boinc boinc    976750 Oct 19 12:29 agis_schedconf.cvmfs.json
[2025-10-19 13:35:39] -rw------- 1 boinc boinc   1560740 Oct 19 12:29 agis_ddmendpoints.agis.ALL.json
[2025-10-19 13:35:39] drwx------ 5 boinc boinc      4096 Oct 19 12:29 pilot3
[2025-10-19 13:35:39] -rw------- 1 boinc boinc        95 Oct 19 13:34 pilot_heartbeat.json
[2025-10-19 13:35:39] -rw------- 1 boinc boinc 208873975 Oct 19 13:34 HITS.46771637._046262.pool.root.1
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc       529 Oct 19 13:35 boinc_task_state.xml
[2025-10-19 13:35:39] -rw------- 1 boinc boinc      1015 Oct 19 13:35 memory_monitor_summary.json
[2025-10-19 13:35:39] -rw------- 1 boinc boinc    264908 Oct 19 13:35 log.46771637._046262.job.log.tgz.1
[2025-10-19 13:35:39] -rw------- 1 boinc boinc      7754 Oct 19 13:35 heartbeat.json
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc        27 Oct 19 13:35 wrapper_checkpoint.txt
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc      8192 Oct 19 13:35 boinc_mmap_file
[2025-10-19 13:35:39] -rw------- 1 boinc boinc      4628 Oct 19 13:35 pilotlog.txt
[2025-10-19 13:35:39] -rw------- 1 boinc boinc    593070 Oct 19 13:35 log.46771637._046262.job.log.1
[2025-10-19 13:35:39] -rw------- 1 boinc boinc       357 Oct 19 13:35 output.list
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc       620 Oct 19 13:35 runtime_log
[2025-10-19 13:35:39] -rw------- 1 boinc boinc    880640 Oct 19 13:35 result.tar.gz
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc      8782 Oct 19 13:35 runtime_log.err
[2025-10-19 13:35:39] -rw------- 1 boinc boinc       659 Oct 19 13:35 HGDLDmnsQU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAlcMDmYiUTNm.diag
[2025-10-19 13:35:39] -rw-r--r-- 1 boinc boinc      7211 Oct 19 13:35 stderr.txt
[2025-10-19 13:35:39] HITS file was successfully produced:
[2025-10-19 13:35:39] -rw------- 1 boinc boinc 208873975 Oct 19 13:34 shared/HITS.pool.root.1
[2025-10-19 13:35:39]  *** Contents of shared directory: ***
[2025-10-19 13:35:39] total 428928
[2025-10-19 13:35:39] -rw-r--r-- 2 boinc boinc 228867785 Oct 19 12:29 ATLAS.root_0
[2025-10-19 13:35:39] -rw-r--r-- 2 boinc boinc    569674 Oct 19 12:29 input.tar.gz
[2025-10-19 13:35:39] -rw-r--r-- 2 boinc boinc     15120 Oct 19 12:29 start_atlas.sh
[2025-10-19 13:35:39] -rw------- 1 boinc boinc 208873975 Oct 19 13:34 HITS.pool.root.1
[2025-10-19 13:35:39] -rw------- 1 boinc boinc    880640 Oct 19 13:35 result.tar.gz
13:35:41 (2004216): run_atlas exited; CPU time 14973.080632
13:35:41 (2004216): called boinc_finish(0)

</stderr_txt>
]]>

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