Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:07:06 (2113913): wrapper (7.7.26015): starting
13:07:06 (2113913): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 13:07:06] Arguments: --nthreads 4
[2025-10-19 13:07:06] Threads: 4
[2025-10-19 13:07:06] Checking for CVMFS
[2025-10-19 13:07:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 13:07:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 13:07:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 13:07:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 13:07:06] 2.9.2.0 274972 4975 96048 151885 1 56 23558163 36864001 0 130560 0 4815105 99.992 183541 2129 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 13:07:06] CVMFS is ok
[2025-10-19 13:07:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 13:07:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 13:07:06] Further information can be found at the LHC@home message board.
[2025-10-19 13:07:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 13:07:06] Checking for apptainer binary...
[2025-10-19 13:07:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 13:07:06] Running /usr/bin/apptainer --version
[2025-10-19 13:07:06] apptainer version 1.4.1-1.1
[2025-10-19 13:07:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 13:07:06] thA315b
[2025-10-19 13:07:06] apptainer works
[2025-10-19 13:07:06] Set ATHENA_PROC_NUMBER=4
[2025-10-19 13:07:06] Set ATHENA_CORE_NUMBER=4
[2025-10-19 13:07:06] Starting ATLAS job with PandaID=6848042874
[2025-10-19 13:07:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 14:16:23]  *** The last 200 lines of the pilot log: ***
[2025-10-19 14:16:23] 2025-10-19 12:15:52,251 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 14:16:23] 2025-10-19 12:15:52,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 14:16:23] 2025-10-19 12:15:52,253 | INFO     | did not find any defunct processes belonging to 2124281
[2025-10-19 14:16:23] 2025-10-19 12:15:52,254 | INFO     | did not find any defunct processes belonging to 2124281
[2025-10-19 14:16:23] 2025-10-19 12:15:52,254 | INFO     | ready for new job
[2025-10-19 14:16:23] 2025-10-19 12:15:52,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 14:16:23] 2025-10-19 12:15:52,254 | INFO     | ***************************************
[2025-10-19 14:16:23] 2025-10-19 12:15:52,255 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 14:16:23] 2025-10-19 12:15:52,255 | INFO     | ***************************************
[2025-10-19 14:16:23] 2025-10-19 12:15:52,255 | INFO     | 
[2025-10-19 14:16:23] 2025-10-19 12:15:52,255 | INFO     | architecture information:
[2025-10-19 14:16:23] 2025-10-19 12:15:52,255 | INFO     | executing command: cat /etc/os-release
[2025-10-19 14:16:23] 2025-10-19 12:15:52,264 | INFO     | cat /etc/os-release:
[2025-10-19 14:16:23] NAME="CentOS Linux"
[2025-10-19 14:16:23] VERSION="7 (Core)"
[2025-10-19 14:16:23] ID="centos"
[2025-10-19 14:16:23] ID_LIKE="rhel fedora"
[2025-10-19 14:16:23] VERSION_ID="7"
[2025-10-19 14:16:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 14:16:23] ANSI_COLOR="0;31"
[2025-10-19 14:16:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 14:16:23] HOME_URL="https://www.centos.org/"
[2025-10-19 14:16:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 14:16:23] 
[2025-10-19 14:16:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 14:16:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 14:16:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 14:16:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 14:16:23] 
[2025-10-19 14:16:23] 2025-10-19 12:15:52,264 | INFO     | ***************************************
[2025-10-19 14:16:23] 2025-10-19 12:15:52,768 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 14:16:23] 2025-10-19 12:15:52,780 | INFO     | sufficient remaining disk space (338139545600 B)
[2025-10-19 14:16:23] 2025-10-19 12:15:52,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 14:16:23] 2025-10-19 12:15:52,781 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 14:16:23] 2025-10-19 12:15:52,781 | INFO     | update_server=False
[2025-10-19 14:16:23] 2025-10-19 12:15:52,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 14:16:23] 2025-10-19 12:15:52,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 14:16:23] 2025-10-19 12:15:52,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 14:16:23] 2025-10-19 12:15:53,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 14:16:23] 2025-10-19 12:15:53,053 | INFO     | aborting loop
[2025-10-19 14:16:23] 2025-10-19 12:15:53,211 | INFO     | all job control threads have been joined
[2025-10-19 14:16:23] 2025-10-19 12:15:53,396 | INFO     | all data control threads have been joined
[2025-10-19 14:16:23] 2025-10-19 12:15:53,787 | INFO     | [job] retrieve thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:53,787 | INFO     | [job] queue monitor thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:53,893 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,008 | INFO     | [data] copytool_in thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,059 | INFO     | [job] job monitor thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,174 | INFO     | all payload control threads have been joined
[2025-10-19 14:16:23] 2025-10-19 12:15:54,203 | INFO     | [job] validate thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,216 | INFO     | [job] control thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 14:16:23] 2025-10-19 12:15:54,306 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,337 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,402 | INFO     | [data] control thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:54,625 | INFO     | [payload] validate_post thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:55,119 | INFO     | [payload] failed_post thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:55,180 | INFO     | [payload] control thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:56,229 | INFO     | [data] copytool_out thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:15:56,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:16:02,934 | INFO     | job.realtimelogging is not enabled
[2025-10-19 14:16:23] 2025-10-19 12:16:03,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 14:16:23] 2025-10-19 12:16:17,236 | INFO     | [monitor] cgroup control has ended
[2025-10-19 14:16:23] 2025-10-19 12:16:18,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816904173376)>', '<ExcThread(monitor, started 139816284976896)>']
[2025-10-19 14:16:23] 2025-10-19 12:16:22,368 | INFO     | PID=2117702 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 14:16:23] 2025-10-19 12:16:22,368 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 14:16:23] 2025-10-19 12:16:22,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 14:16:23] 2025-10-19 12:16:22,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 14:16:23] 2025-10-19 12:16:22,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 14:16:23] 2025-10-19 12:16:22,368 | INFO     | [monitor] control thread has ended
[2025-10-19 14:16:23] 2025-10-19 12:16:23,180 | INFO     | all workflow threads have been joined
[2025-10-19 14:16:23] 2025-10-19 12:16:23,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 14:16:23] 2025-10-19 12:16:23,180 | INFO     | traces error code: 0
[2025-10-19 14:16:23] 2025-10-19 12:16:23,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 14:16:23] 2025-10-19 12:16:23,235 [wrapper] ==== pilot stdout END ====
[2025-10-19 14:16:23] 2025-10-19 12:16:23,238 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 14:16:23] 2025-10-19 12:16:23,240 [wrapper] pilotpid: 2117702
[2025-10-19 14:16:23] 2025-10-19 12:16:23,243 [wrapper] Pilot exit status: 0
[2025-10-19 14:16:23] 2025-10-19 12:16:23,251 [wrapper] pandaids: 6848042874
[2025-10-19 14:16:23] 2025-10-19 12:16:23,269 [wrapper] cleanup supervisor_pilot 2134287 2117703
[2025-10-19 14:16:23] 2025-10-19 12:16:23,271 [wrapper] Test setup, not cleaning
[2025-10-19 14:16:23] 2025-10-19 12:16:23,274 [wrapper] apfmon messages muted
[2025-10-19 14:16:23] 2025-10-19 12:16:23,276 [wrapper] ==== wrapper stdout END ====
[2025-10-19 14:16:23] 2025-10-19 12:16:23,279 [wrapper] ==== wrapper stderr END ====
[2025-10-19 14:16:23]  *** Error codes and diagnostics ***
[2025-10-19 14:16:23]     "exeErrorCode": 0,
[2025-10-19 14:16:23]     "exeErrorDiag": "",
[2025-10-19 14:16:23]     "pilotErrorCode": 0,
[2025-10-19 14:16:23]     "pilotErrorDiag": "",
[2025-10-19 14:16:23]  *** Listing of results directory ***
[2025-10-19 14:16:23] total 431776
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc    557409 Oct 18 21:44 pilot3.tar.gz
[2025-10-19 14:16:23] -rwx------ 1 boinc boinc     36292 Oct 18 22:35 runpilot2-wrapper.sh
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc      5112 Oct 18 22:35 queuedata.json
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc       100 Oct 19 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 14:16:23] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 13:07 run_atlas
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc       105 Oct 19 13:07 job.xml
[2025-10-19 14:16:23] -rw-r--r-- 2 boinc boinc 226017060 Oct 19 13:07 EVNT.46771634._001982.pool.root.1
[2025-10-19 14:16:23] -rw-r--r-- 2 boinc boinc    569678 Oct 19 13:07 input.tar.gz
[2025-10-19 14:16:23] -rw-r--r-- 2 boinc boinc     15120 Oct 19 13:07 start_atlas.sh
[2025-10-19 14:16:23] drwxrwx--x 2 boinc boinc      4096 Oct 19 13:07 shared
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc         0 Oct 19 13:07 boinc_setup_complete
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc      6443 Oct 19 13:07 init_data.xml
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc         0 Oct 19 13:07 boinc_lockfile
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc      2558 Oct 19 13:07 pandaJob.out
[2025-10-19 14:16:23] -rw------- 1 boinc boinc    976750 Oct 19 13:07 agis_schedconf.cvmfs.json
[2025-10-19 14:16:23] -rw------- 1 boinc boinc   1560740 Oct 19 13:07 agis_ddmendpoints.agis.ALL.json
[2025-10-19 14:16:23] drwx------ 5 boinc boinc      4096 Oct 19 13:07 pilot3
[2025-10-19 14:16:23] -rw------- 1 boinc boinc 210500118 Oct 19 14:15 HITS.46771637._047050.pool.root.1
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc       529 Oct 19 14:15 boinc_task_state.xml
[2025-10-19 14:16:23] -rw------- 1 boinc boinc        95 Oct 19 14:15 pilot_heartbeat.json
[2025-10-19 14:16:23] -rw------- 1 boinc boinc      1028 Oct 19 14:15 memory_monitor_summary.json
[2025-10-19 14:16:23] -rw------- 1 boinc boinc    251543 Oct 19 14:15 log.46771637._047050.job.log.tgz.1
[2025-10-19 14:16:23] -rw------- 1 boinc boinc      7747 Oct 19 14:15 heartbeat.json
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc      8192 Oct 19 14:15 boinc_mmap_file
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc        27 Oct 19 14:15 wrapper_checkpoint.txt
[2025-10-19 14:16:23] -rw------- 1 boinc boinc      4824 Oct 19 14:16 pilotlog.txt
[2025-10-19 14:16:23] -rw------- 1 boinc boinc    614715 Oct 19 14:16 log.46771637._047050.job.log.1
[2025-10-19 14:16:23] -rw------- 1 boinc boinc       357 Oct 19 14:16 output.list
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc       620 Oct 19 14:16 runtime_log
[2025-10-19 14:16:23] -rw------- 1 boinc boinc    880640 Oct 19 14:16 result.tar.gz
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc      8782 Oct 19 14:16 runtime_log.err
[2025-10-19 14:16:23] -rw------- 1 boinc boinc       659 Oct 19 14:16 SRBLDmlpSU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7WyNDmHoxAZn.diag
[2025-10-19 14:16:23] -rw-r--r-- 1 boinc boinc     10064 Oct 19 14:16 stderr.txt
[2025-10-19 14:16:23] HITS file was successfully produced:
[2025-10-19 14:16:23] -rw------- 1 boinc boinc 210500118 Oct 19 14:15 shared/HITS.pool.root.1
[2025-10-19 14:16:23]  *** Contents of shared directory: ***
[2025-10-19 14:16:23] total 427732
[2025-10-19 14:16:23] -rw-r--r-- 2 boinc boinc 226017060 Oct 19 13:07 ATLAS.root_0
[2025-10-19 14:16:23] -rw-r--r-- 2 boinc boinc    569678 Oct 19 13:07 input.tar.gz
[2025-10-19 14:16:23] -rw-r--r-- 2 boinc boinc     15120 Oct 19 13:07 start_atlas.sh
[2025-10-19 14:16:23] -rw------- 1 boinc boinc 210500118 Oct 19 14:15 HITS.pool.root.1
[2025-10-19 14:16:23] -rw------- 1 boinc boinc    880640 Oct 19 14:16 result.tar.gz
14:16:24 (2113913): run_atlas exited; CPU time 15549.953826
14:16:24 (2113913): called boinc_finish(0)

</stderr_txt>
]]>

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