Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:44 (5250): wrapper (7.7.26015): starting
13:04:44 (5250): wrapper: running run_atlas (--nthreads 8)
[2025-10-19 13:04:44] Arguments: --nthreads 8
[2025-10-19 13:04:44] Threads: 8
[2025-10-19 13:04:44] Checking for CVMFS
[2025-10-19 13:04:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 13:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 13:04:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 13:04:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 13:04:46] 2.11.2.0 21240 230401 140468 151885 1 17 19260145 25165825 4634 130560 0 116016334 99.881 70193256 3220 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-19 13:04:46] CVMFS is ok
[2025-10-19 13:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 13:04:46] Checking for apptainer binary...
[2025-10-19 13:04:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 13:04:46] Running /usr/bin/apptainer --version
[2025-10-19 13:04:46] apptainer version 1.3.2-1.el7
[2025-10-19 13:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 13:05:00] cg-vwn384.simple-grid.lan
[2025-10-19 13:05:00] apptainer works
[2025-10-19 13:05:00] Set ATHENA_PROC_NUMBER=8
[2025-10-19 13:05:00] Set ATHENA_CORE_NUMBER=8
[2025-10-19 13:05:00] Starting ATLAS job with PandaID=6848041253
[2025-10-19 13:05:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 17:17:58]  *** The last 200 lines of the pilot log: ***
[2025-10-19 17:17:58] 2025-10-19 15:17:04,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,056 | INFO     | time since job start (14924s) is within the limit (172800.0s)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,128 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 17:17:58] 2025-10-19 15:17:06,129 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-19 17:17:58] 2025-10-19 15:17:06,131 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6848041253/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,131 | INFO     | extracted standard info from prmon json
[2025-10-19 17:17:58] 2025-10-19 15:17:06,132 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 17:17:58] 2025-10-19 15:17:06,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 17:17:58] 2025-10-19 15:17:06,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 17:17:58] 2025-10-19 15:17:06,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 17:17:58] 2025-10-19 15:17:06,136 | INFO     | fitting pss+swap vs Time
[2025-10-19 17:17:58] 2025-10-19 15:17:06,137 | INFO     | sum of square deviations: 4075741535.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,139 | INFO     | sum of deviations: 12041847069.000013
[2025-10-19 17:17:58] 2025-10-19 15:17:06,139 | INFO     | mean x: 1760879738.5
[2025-10-19 17:17:58] 2025-10-19 15:17:06,139 | INFO     | mean y: 2495628.279661017
[2025-10-19 17:17:58] 2025-10-19 15:17:06,139 | INFO     | -- intersect: -5200053241.865446
[2025-10-19 17:17:58] 2025-10-19 15:17:06,139 | INFO     | intersect: -5200053241.865446
[2025-10-19 17:17:58] 2025-10-19 15:17:06,139 | INFO     | chi2: 5.134816976497753
[2025-10-19 17:17:58] 2025-10-19 15:17:06,140 | INFO     | sum of square deviations: 3822136780.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,141 | INFO     | sum of deviations: 27785623220.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | mean x: 1760879586.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | mean y: 2504933.9696969697
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | -- intersect: -12798485592.692091
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | intersect: -12798485592.692091
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | chi2: 4.402069152529107
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | current chi2=4.402069152529107 (change=14.270183870670754 %)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,142 | INFO     | right removable region: 230
[2025-10-19 17:17:58] 2025-10-19 15:17:06,143 | INFO     | sum of square deviations: 3822136780.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,151 | INFO     | sum of deviations: -62884591157.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,151 | INFO     | mean x: 1760879891.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,151 | INFO     | mean y: 2540595.051948052
[2025-10-19 17:17:58] 2025-10-19 15:17:06,151 | INFO     | -- intersect: 28973825087.418472
[2025-10-19 17:17:58] 2025-10-19 15:17:06,151 | INFO     | intersect: 28973825087.418472
[2025-10-19 17:17:58] 2025-10-19 15:17:06,151 | INFO     | chi2: 1.2576337310988428
[2025-10-19 17:17:58] 2025-10-19 15:17:06,152 | INFO     | current chi2=1.2576337310988428 (change=75.50772039480513 %)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,152 | INFO     | sum of square deviations: 3579276412.5
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | sum of deviations: -76460606526.0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | mean x: 1760880043.5
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | mean y: 2549049.8761061947
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | -- intersect: 37618519606.1985
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | intersect: 37618519606.1985
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | chi2: 1.0223822177079693
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | current chi2=1.0223822177079693 (change=18.705884517372574 %)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,154 | INFO     | left removable region: 20
[2025-10-19 17:17:58] 2025-10-19 15:17:06,155 | INFO     | sum of square deviations: 2871616632.5
[2025-10-19 17:17:58] 2025-10-19 15:17:06,156 | INFO     | sum of deviations: -53202902224.99999
[2025-10-19 17:17:58] 2025-10-19 15:17:06,156 | INFO     | mean x: 1760880165.5
[2025-10-19 17:17:58] 2025-10-19 15:17:06,156 | INFO     | mean y: 2555828.5428571426
[2025-10-19 17:17:58] 2025-10-19 15:17:06,157 | INFO     | -- intersect: 32626665263.888355
[2025-10-19 17:17:58] 2025-10-19 15:17:06,157 | INFO     | intersect: 32626665263.888355
[2025-10-19 17:17:58] 2025-10-19 15:17:06,157 | INFO     | chi2: 0.20810711296061946
[2025-10-19 17:17:58] 2025-10-19 15:17:06,157 | INFO     | -- intersect: 32626665263.888355
[2025-10-19 17:17:58] 2025-10-19 15:17:06,157 | INFO     | current memory leak: -18.53 B/s (using 210 data points, chi2=0.21)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | ..............................
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | . Timing measurements:
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | . get job = 0 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | . initial setup = 6 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | . payload setup = 128 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | . stage-in = 0 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,158 | INFO     | . payload execution = 14503 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,159 | INFO     | . stage-out = 3 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,159 | INFO     | . log creation = 1 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,159 | INFO     | ..............................
[2025-10-19 17:17:58] 2025-10-19 15:17:06,272 | INFO     | 
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | job summary report
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | --------------------------------------------------
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | PanDA job id: 6848041253
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | task id: 46771637
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | errors: (none)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | pilot state: finished 
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | transexitcode: 0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | exeerrorcode: 0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | exeerrordiag: 
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | exitcode: 0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,273 | INFO     | exitmsg: OK
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | cpuconsumptiontime: 53862 s
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | nevents: 400
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | neventsw: 0
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | pid: 15608
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | pgrp: 15608
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | corecount: 8
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | event service: False
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | sizes: {0: 2348703, 1: 2348958, 12: 2348958, 23: 2348986, 33: 2349014, 44: 2349070, 55: 2349226, 66: 2349254, 76: 2349282, 87: 2349628, 98: 2349628, 14636: 2380177
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | --------------------------------------------------
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | 
[2025-10-19 17:17:58] 2025-10-19 15:17:06,274 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-10-19 17:17:58] 2025-10-19 15:17:06,862 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,864 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 17:17:58] 2025-10-19 15:17:06,865 | INFO     | job 6848041253 has completed (purged errors)
[2025-10-19 17:17:58] 2025-10-19 15:17:06,865 | INFO     | overall cleanup function is called
[2025-10-19 17:17:58] 2025-10-19 15:17:07,874 | INFO     | --- collectZombieJob: --- 10, [15608]
[2025-10-19 17:17:58] 2025-10-19 15:17:07,874 | INFO     | zombie collector waiting for pid 15608
[2025-10-19 17:17:58] 2025-10-19 15:17:07,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 17:17:58] 2025-10-19 15:17:07,874 | INFO     | collected zombie processes
[2025-10-19 17:17:58] 2025-10-19 15:17:07,875 | INFO     | will attempt to kill all subprocesses of pid=15608
[2025-10-19 17:17:58] 2025-10-19 15:17:07,977 | INFO     | process IDs to be killed: [15608] (in reverse order)
[2025-10-19 17:17:58] 2025-10-19 15:17:08,466 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 17:17:58] 2025-10-19 15:17:08,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 17:17:58] 2025-10-19 15:17:08,472 | INFO     | did not find any defunct processes belonging to 15608
[2025-10-19 17:17:58] 2025-10-19 15:17:08,475 | INFO     | did not find any defunct processes belonging to 15608
[2025-10-19 17:17:58] 2025-10-19 15:17:08,476 | INFO     | ready for new job
[2025-10-19 17:17:58] 2025-10-19 15:17:08,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 17:17:58] 2025-10-19 15:17:08,478 | INFO     | ***************************************
[2025-10-19 17:17:58] 2025-10-19 15:17:08,478 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 17:17:58] 2025-10-19 15:17:08,478 | INFO     | ***************************************
[2025-10-19 17:17:58] 2025-10-19 15:17:08,478 | INFO     | 
[2025-10-19 17:17:58] 2025-10-19 15:17:08,479 | INFO     | pilot is running in a VM
[2025-10-19 17:17:58] 2025-10-19 15:17:08,479 | INFO     | architecture information:
[2025-10-19 17:17:58] 2025-10-19 15:17:08,493 | INFO     | executing command: cat /etc/os-release
[2025-10-19 17:17:58] 2025-10-19 15:17:08,735 | INFO     | cat /etc/os-release:
[2025-10-19 17:17:58] NAME="CentOS Linux"
[2025-10-19 17:17:58] VERSION="7 (Core)"
[2025-10-19 17:17:58] ID="centos"
[2025-10-19 17:17:58] ID_LIKE="rhel fedora"
[2025-10-19 17:17:58] VERSION_ID="7"
[2025-10-19 17:17:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 17:17:58] ANSI_COLOR="0;31"
[2025-10-19 17:17:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 17:17:58] HOME_URL="https://www.centos.org/"
[2025-10-19 17:17:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 17:17:58] 
[2025-10-19 17:17:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 17:17:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 17:17:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 17:17:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 17:17:58] 
[2025-10-19 17:17:58] 2025-10-19 15:17:08,736 | INFO     | ***************************************
[2025-10-19 17:17:58] 2025-10-19 15:17:09,239 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-10-19 17:17:58] 2025-10-19 15:17:09,447 | INFO     | sufficient remaining disk space (496137928704 B)
[2025-10-19 17:17:58] 2025-10-19 15:17:09,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 17:17:58] 2025-10-19 15:17:09,447 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 17:17:58] 2025-10-19 15:17:09,447 | INFO     | update_server=False
[2025-10-19 17:17:58] 2025-10-19 15:17:09,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 17:17:58] 2025-10-19 15:17:09,798 | INFO     | all job control threads have been joined
[2025-10-19 17:17:58] 2025-10-19 15:17:09,819 | INFO     | all payload control threads have been joined
[2025-10-19 17:17:58] 2025-10-19 15:17:10,023 | INFO     | all data control threads have been joined
[2025-10-19 17:17:58] 2025-10-19 15:17:10,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 17:17:58] 2025-10-19 15:17:10,442 | INFO     | aborting loop
[2025-10-19 17:17:58] 2025-10-19 15:17:10,453 | INFO     | [job] retrieve thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:10,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 17:17:58] 2025-10-19 15:17:10,506 | INFO     | [payload] failed_post thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:10,561 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:10,710 | INFO     | [job] validate thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:10,803 | INFO     | [job] control thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:10,825 | INFO     | [payload] control thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:10,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:11,029 | INFO     | [data] control thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:11,202 | INFO     | [data] copytool_in thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:11,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 17:17:58] 2025-10-19 15:17:11,308 | INFO     | [payload] validate_post thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:11,448 | INFO     | [job] job monitor thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:11,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 17:17:58] 2025-10-19 15:17:11,778 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:11,811 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:12,298 | INFO     | [job] queue monitor thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:12,470 | INFO     | [data] copytool_out thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:15,704 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 17:17:58] 2025-10-19 15:17:39,225 | INFO     | PID=9025 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-19 17:17:58] 2025-10-19 15:17:39,226 | INFO     | .. there are 9 such processes running
[2025-10-19 17:17:58] 2025-10-19 15:17:39,226 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 17:17:58] 2025-10-19 15:17:39,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 17:17:58] 2025-10-19 15:17:39,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 17:17:58] 2025-10-19 15:17:48,131 | INFO     | [monitor] cgroup control has ended
[2025-10-19 17:17:58] 2025-10-19 15:17:48,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215274739520)>', '<ExcThread(monitor, started 140214701909760)>']
[2025-10-19 17:17:58] 2025-10-19 15:17:49,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 17:17:58] 2025-10-19 15:17:49,286 | INFO     | [monitor] control thread has ended
[2025-10-19 17:17:58] 2025-10-19 15:17:53,944 | INFO     | all workflow threads have been joined
[2025-10-19 17:17:58] 2025-10-19 15:17:53,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 17:17:58] 2025-10-19 15:17:53,944 | INFO     | traces error code: 0
[2025-10-19 17:17:58] 2025-10-19 15:17:53,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 17:17:58] 2025-10-19 15:17:54,254 [wrapper] ==== pilot stdout END ====
[2025-10-19 17:17:58] 2025-10-19 15:17:54,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 17:17:58] 2025-10-19 15:17:54,393 [wrapper] pilotpid: 9025
[2025-10-19 17:17:58] 2025-10-19 15:17:54,495 [wrapper] Pilot exit status: 0
[2025-10-19 17:17:58] 2025-10-19 15:17:54,930 [wrapper] pandaids: 6848041253
[2025-10-19 17:17:58] 2025-10-19 15:17:55,584 [wrapper] cleanup supervisor_pilot 24826 9026
[2025-10-19 17:17:58] 2025-10-19 15:17:55,636 [wrapper] Test setup, not cleaning
[2025-10-19 17:17:58] 2025-10-19 15:17:55,695 [wrapper] apfmon messages muted
[2025-10-19 17:17:58] 2025-10-19 15:17:55,754 [wrapper] ==== wrapper stdout END ====
[2025-10-19 17:17:58] 2025-10-19 15:17:55,846 [wrapper] ==== wrapper stderr END ====
[2025-10-19 17:17:58]  *** Error codes and diagnostics ***
[2025-10-19 17:17:58]     "exeErrorCode": 0,
[2025-10-19 17:17:58]     "exeErrorDiag": "",
[2025-10-19 17:17:58]     "pilotErrorCode": 0,
[2025-10-19 17:17:58]     "pilotErrorDiag": "",
[2025-10-19 17:17:58]  *** Listing of results directory ***
[2025-10-19 17:17:58] total 432532
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc    557409 Oct 18 19:39 pilot3.tar.gz
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc      5112 Oct 18 20:08 queuedata.json
[2025-10-19 17:17:58] -rwx------. 1 boinc boinc     36292 Oct 18 20:08 runpilot2-wrapper.sh
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc       100 Oct 19 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 17:17:58] -rwxr-xr-x. 1 boinc boinc      7986 Oct 19 13:04 run_atlas
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc       105 Oct 19 13:04 job.xml
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc      6392 Oct 19 13:04 init_data.xml
[2025-10-19 17:17:58] -rw-r--r--. 2 boinc boinc 228979747 Oct 19 13:04 EVNT.46771634._001932.pool.root.1
[2025-10-19 17:17:58] -rw-r--r--. 2 boinc boinc     15120 Oct 19 13:04 start_atlas.sh
[2025-10-19 17:17:58] drwxrwx--x. 2 boinc boinc        68 Oct 19 13:04 shared
[2025-10-19 17:17:58] -rw-r--r--. 2 boinc boinc    569674 Oct 19 13:04 input.tar.gz
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc         0 Oct 19 13:04 boinc_lockfile
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc      2558 Oct 19 13:05 pandaJob.out
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc    976750 Oct 19 13:08 agis_schedconf.cvmfs.json
[2025-10-19 17:17:58] drwx------. 5 boinc boinc      4096 Oct 19 13:08 pilot3
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc 205101925 Oct 19 17:14 HITS.46771637._045830.pool.root.1
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc       531 Oct 19 17:14 boinc_task_state.xml
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc      1015 Oct 19 17:15 memory_monitor_summary.json
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc   1560740 Oct 19 17:15 agis_ddmendpoints.agis.ALL.json
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc    467147 Oct 19 17:15 log.46771637._045830.job.log.tgz.1
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc        95 Oct 19 17:16 pilot_heartbeat.json
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc      7786 Oct 19 17:17 heartbeat.json
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc      8192 Oct 19 17:17 boinc_mmap_file
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc        28 Oct 19 17:17 wrapper_checkpoint.txt
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc      4884 Oct 19 17:17 pilotlog.txt
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc   1999323 Oct 19 17:17 log.46771637._045830.job.log.1
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc       357 Oct 19 17:17 output.list
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc       620 Oct 19 17:17 runtime_log
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc   2488320 Oct 19 17:17 result.tar.gz
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc      8717 Oct 19 17:17 runtime_log.err
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc       657 Oct 19 17:17 M6fNDmxWQU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj6xNDmI5D20m.diag
[2025-10-19 17:17:58] -rw-r--r--. 1 boinc boinc     20812 Oct 19 17:17 stderr.txt
[2025-10-19 17:17:58] HITS file was successfully produced:
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc 205101925 Oct 19 17:14 shared/HITS.pool.root.1
[2025-10-19 17:17:58]  *** Contents of shared directory: ***
[2025-10-19 17:17:58] total 426920
[2025-10-19 17:17:58] -rw-r--r--. 2 boinc boinc 228979747 Oct 19 13:04 ATLAS.root_0
[2025-10-19 17:17:58] -rw-r--r--. 2 boinc boinc     15120 Oct 19 13:04 start_atlas.sh
[2025-10-19 17:17:58] -rw-r--r--. 2 boinc boinc    569674 Oct 19 13:04 input.tar.gz
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc 205101925 Oct 19 17:14 HITS.pool.root.1
[2025-10-19 17:17:58] -rw-------. 1 boinc boinc   2488320 Oct 19 17:17 result.tar.gz
17:17:59 (5250): run_atlas exited; CPU time 54038.270559
17:17:59 (5250): called boinc_finish(0)

</stderr_txt>
]]>

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