Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:21:28 (27546): wrapper (7.7.26015): starting
19:21:28 (27546): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 19:21:28] Arguments: --nthreads 12
[2025-10-18 19:21:28] Threads: 12
[2025-10-18 19:21:28] Checking for CVMFS
[2025-10-18 19:21:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 19:21:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 19:21:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 19:21:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 19:21:29] 2.11.2.0 2916 232129 101384 151868 2 56 13867353 20275201 1 130560 1 114434559 99.984 13735158 12717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 19:21:29] CVMFS is ok
[2025-10-18 19:21:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 19:21:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 19:21:29] Further information can be found at the LHC@home message board.
[2025-10-18 19:21:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 19:21:29] Checking for apptainer binary...
[2025-10-18 19:21:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 19:21:29] Running /usr/bin/apptainer --version
[2025-10-18 19:21:29] apptainer version 1.3.2-1.el7
[2025-10-18 19:21:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 19:21:30] c-205-23.aglt2.org
[2025-10-18 19:21:30] apptainer works
[2025-10-18 19:21:30] Set ATHENA_PROC_NUMBER=12
[2025-10-18 19:21:30] Set ATHENA_CORE_NUMBER=12
[2025-10-18 19:21:30] Starting ATLAS job with PandaID=6850530454
[2025-10-18 19:21:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 20:17:59]  *** The last 200 lines of the pilot log: ***
[2025-10-18 20:17:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 20:17:59]  replicas=None
[2025-10-18 20:17:59]  scope=mc23_13p6TeV
[2025-10-18 20:17:59]  status=None
[2025-10-18 20:17:59]  status_code=0
[2025-10-18 20:17:59]  storage_token=
[2025-10-18 20:17:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6850530454/log.46808902._004775.job.log.tgz.1
[2025-10-18 20:17:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/52/log.46808902._004775.job.log.tgz.1
[2025-10-18 20:17:59]  workdir=None
[2025-10-18 20:17:59] ]
[2025-10-18 20:17:59] 2025-10-19 00:17:18,913 | INFO     | transferring file log.46808902._004775.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6850530454/log.46808902._004775.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 20:17:59] 2025-10-19 00:17:18,914 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6850530454/log.46808902._004775.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._004775.job
[2025-10-18 20:17:59] 2025-10-19 00:17:18,936 | INFO     | adding to output.list: log.46808902._004775.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/52/log.46808902._004775.job.log.tg
[2025-10-18 20:17:59] 2025-10-19 00:17:18,937 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 20:17:59] 2025-10-19 00:17:18,937 | INFO     | summary of transferred files:
[2025-10-18 20:17:59] 2025-10-19 00:17:18,937 | INFO     |  -- lfn=log.46808902._004775.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 20:17:59] 2025-10-19 00:17:18,937 | INFO     | stage-out finished correctly
[2025-10-18 20:17:59] 2025-10-19 00:17:19,700 | INFO     | time since job start (3334s) is within the limit (172800.0s)
[2025-10-18 20:17:59] 2025-10-19 00:17:20,000 | INFO     | monitor loop #251: job 0:6850530454 is in state 'finished'
[2025-10-18 20:17:59] 2025-10-19 00:17:20,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 20:17:59] 2025-10-19 00:17:20,579 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 20:17:59] 2025-10-19 00:17:21,210 | INFO     | job 6850530454 has state=finished
[2025-10-18 20:17:59] 2025-10-19 00:17:21,210 | INFO     | preparing for final server update for job 6850530454 in state='finished'
[2025-10-18 20:17:59] 2025-10-19 00:17:21,211 | INFO     | this job has now completed (state=finished)
[2025-10-18 20:17:59] 2025-10-19 00:17:21,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 20:17:59] 2025-10-19 00:17:21,211 | INFO     | log transfer has been attempted: DONE
[2025-10-18 20:17:59] 2025-10-19 00:17:21,211 | INFO     | job 6850530454 has finished - writing final server update
[2025-10-18 20:17:59] 2025-10-19 00:17:21,212 | INFO     | total number of processed events: 400 (read)
[2025-10-18 20:17:59] 2025-10-19 00:17:21,213 | INFO     | executing command: lscpu
[2025-10-18 20:17:59] 2025-10-19 00:17:21,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 20:17:59] 2025-10-19 00:17:21,706 | INFO     | time since job start (3336s) is within the limit (172800.0s)
[2025-10-18 20:17:59] 2025-10-19 00:17:22,504 | INFO     | monitor loop #252: job 0:6850530454 is in state 'finished'
[2025-10-18 20:17:59] 2025-10-19 00:17:22,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 20:17:59] 2025-10-19 00:17:23,712 | INFO     | time since job start (3338s) is within the limit (172800.0s)
[2025-10-18 20:17:59] 2025-10-19 00:17:25,007 | INFO     | monitor loop #253: job 0:6850530454 is in state 'finished'
[2025-10-18 20:17:59] 2025-10-19 00:17:25,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 20:17:59] 2025-10-19 00:17:25,717 | INFO     | time since job start (3340s) is within the limit (172800.0s)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,229 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 20:17:59] 2025-10-19 00:17:26,233 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-18 20:17:59] 2025-10-19 00:17:26,235 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850530454/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,236 | INFO     | extracted standard info from prmon json
[2025-10-18 20:17:59] 2025-10-19 00:17:26,236 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 20:17:59] 2025-10-19 00:17:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 20:17:59] 2025-10-19 00:17:26,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 20:17:59] 2025-10-19 00:17:26,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 20:17:59] 2025-10-19 00:17:26,239 | INFO     | fitting pss+swap vs Time
[2025-10-18 20:17:59] 2025-10-19 00:17:26,239 | INFO     | sum of square deviations: 34277852.0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | sum of deviations: 553442142.0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | mean x: 1760831473.5
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | mean y: 2938130.0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | -- intersect: -28427032989.393833
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | intersect: -28427032989.393833
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | chi2: 0.00036819936360694587
[2025-10-18 20:17:59] 2025-10-19 00:17:26,240 | INFO     | -- intersect: -28427032989.393833
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | current memory leak: 16.15 B/s (using 48 data points, chi2=0.00)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | could have reported an average CPU frequency of 1924 MHz (5 samples)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | ..............................
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | . Timing measurements:
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | . get job = 0 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | . initial setup = 2 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,241 | INFO     | . payload setup = 7 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,242 | INFO     | . stage-in = 0 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,242 | INFO     | . payload execution = 3305 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,242 | INFO     | . stage-out = 0 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,242 | INFO     | . log creation = 0 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,242 | INFO     | ..............................
[2025-10-18 20:17:59] 2025-10-19 00:17:26,324 | INFO     | 
[2025-10-18 20:17:59] 2025-10-19 00:17:26,325 | INFO     | job summary report
[2025-10-18 20:17:59] 2025-10-19 00:17:26,325 | INFO     | --------------------------------------------------
[2025-10-18 20:17:59] 2025-10-19 00:17:26,325 | INFO     | PanDA job id: 6850530454
[2025-10-18 20:17:59] 2025-10-19 00:17:26,325 | INFO     | task id: 46808902
[2025-10-18 20:17:59] 2025-10-19 00:17:26,325 | INFO     | errors: (none)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | pilot state: finished 
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | transexitcode: 0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | exeerrorcode: 0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | exeerrordiag: 
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | exitcode: 0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,326 | INFO     | exitmsg: OK
[2025-10-18 20:17:59] 2025-10-19 00:17:26,327 | INFO     | cpuconsumptiontime: 35528 s
[2025-10-18 20:17:59] 2025-10-19 00:17:26,327 | INFO     | nevents: 400
[2025-10-18 20:17:59] 2025-10-19 00:17:26,327 | INFO     | neventsw: 0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,327 | INFO     | pid: 5389
[2025-10-18 20:17:59] 2025-10-19 00:17:26,327 | INFO     | pgrp: 5389
[2025-10-18 20:17:59] 2025-10-19 00:17:26,327 | INFO     | corecount: 12
[2025-10-18 20:17:59] 2025-10-19 00:17:26,328 | INFO     | event service: False
[2025-10-18 20:17:59] 2025-10-19 00:17:26,328 | INFO     | sizes: {0: 2348678, 1: 2348877, 6: 2349139, 11: 2349167, 3316: 2374685, 3317: 2383683, 3319: 2383867, 3324: 2384093}
[2025-10-18 20:17:59] 2025-10-19 00:17:26,328 | INFO     | --------------------------------------------------
[2025-10-18 20:17:59] 2025-10-19 00:17:26,328 | INFO     | 
[2025-10-18 20:17:59] 2025-10-19 00:17:26,328 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 20:17:59] 2025-10-19 00:17:26,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 20:17:59] 2025-10-19 00:17:26,378 | INFO     | job 6850530454 has completed (purged errors)
[2025-10-18 20:17:59] 2025-10-19 00:17:26,378 | INFO     | overall cleanup function is called
[2025-10-18 20:17:59] 2025-10-19 00:17:27,387 | INFO     | --- collectZombieJob: --- 10, [5389]
[2025-10-18 20:17:59] 2025-10-19 00:17:27,388 | INFO     | zombie collector waiting for pid 5389
[2025-10-18 20:17:59] 2025-10-19 00:17:27,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 20:17:59] 2025-10-19 00:17:27,388 | INFO     | collected zombie processes
[2025-10-18 20:17:59] 2025-10-19 00:17:27,388 | INFO     | will attempt to kill all subprocesses of pid=5389
[2025-10-18 20:17:59] 2025-10-19 00:17:27,481 | INFO     | process IDs to be killed: [5389] (in reverse order)
[2025-10-18 20:17:59] 2025-10-19 00:17:27,531 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 20:17:59] 2025-10-19 00:17:27,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 20:17:59] 2025-10-19 00:17:27,535 | INFO     | did not find any defunct processes belonging to 5389
[2025-10-18 20:17:59] 2025-10-19 00:17:27,539 | INFO     | did not find any defunct processes belonging to 5389
[2025-10-18 20:17:59] 2025-10-19 00:17:27,539 | INFO     | ready for new job
[2025-10-18 20:17:59] 2025-10-19 00:17:27,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 20:17:59] 2025-10-19 00:17:27,540 | INFO     | ***************************************
[2025-10-18 20:17:59] 2025-10-19 00:17:27,540 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 20:17:59] 2025-10-19 00:17:27,540 | INFO     | ***************************************
[2025-10-18 20:17:59] 2025-10-19 00:17:27,541 | INFO     | 
[2025-10-18 20:17:59] 2025-10-19 00:17:27,541 | INFO     | architecture information:
[2025-10-18 20:17:59] 2025-10-19 00:17:27,542 | INFO     | executing command: cat /etc/os-release
[2025-10-18 20:17:59] 2025-10-19 00:17:27,556 | INFO     | cat /etc/os-release:
[2025-10-18 20:17:59] NAME="CentOS Linux"
[2025-10-18 20:17:59] VERSION="7 (Core)"
[2025-10-18 20:17:59] ID="centos"
[2025-10-18 20:17:59] ID_LIKE="rhel fedora"
[2025-10-18 20:17:59] VERSION_ID="7"
[2025-10-18 20:17:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 20:17:59] ANSI_COLOR="0;31"
[2025-10-18 20:17:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 20:17:59] HOME_URL="https://www.centos.org/"
[2025-10-18 20:17:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 20:17:59] 
[2025-10-18 20:17:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 20:17:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 20:17:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 20:17:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 20:17:59] 
[2025-10-18 20:17:59] 2025-10-19 00:17:27,556 | INFO     | ***************************************
[2025-10-18 20:17:59] 2025-10-19 00:17:28,059 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 20:17:59] 2025-10-19 00:17:28,106 | INFO     | sufficient remaining disk space (29469179904 B)
[2025-10-18 20:17:59] 2025-10-19 00:17:28,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 20:17:59] 2025-10-19 00:17:28,106 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 20:17:59] 2025-10-19 00:17:28,107 | INFO     | update_server=False
[2025-10-18 20:17:59] 2025-10-19 00:17:28,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 20:17:59] 2025-10-19 00:17:28,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:17:59] 2025-10-19 00:17:28,147 | INFO     | all data control threads have been joined
[2025-10-18 20:17:59] 2025-10-19 00:17:28,254 | INFO     | all job control threads have been joined
[2025-10-18 20:17:59] 2025-10-19 00:17:28,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:17:59] 2025-10-19 00:17:28,515 | INFO     | aborting loop
[2025-10-18 20:17:59] 2025-10-19 00:17:29,112 | INFO     | [job] retrieve thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,113 | INFO     | all payload control threads have been joined
[2025-10-18 20:17:59] 2025-10-19 00:17:29,113 | INFO     | [job] queue monitor thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,150 | INFO     | [data] control thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,259 | INFO     | [job] control thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,312 | INFO     | [data] copytool_in thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,510 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,521 | INFO     | [job] job monitor thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 20:17:59] 2025-10-19 00:17:29,860 | INFO     | [payload] failed_post thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:29,969 | INFO     | [job] validate thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:30,125 | INFO     | [payload] control thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:30,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:30,330 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:30,442 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:30,461 | INFO     | [payload] validate_post thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:31,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 20:17:59] 2025-10-19 00:17:31,539 | INFO     | [data] copytool_out thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:35,177 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 20:17:59] 2025-10-19 00:17:50,564 | INFO     | [monitor] cgroup control has ended
[2025-10-18 20:17:59] 2025-10-19 00:17:52,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949162456896)>', '<ExcThread(monitor, started 139948321650432)>']
[2025-10-18 20:17:59] 2025-10-19 00:17:57,578 | INFO     | all workflow threads have been joined
[2025-10-18 20:17:59] 2025-10-19 00:17:57,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 20:17:59] 2025-10-19 00:17:57,580 | INFO     | traces error code: 0
[2025-10-18 20:17:59] 2025-10-19 00:17:57,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 20:17:59] 2025-10-19 00:17:58,923 | INFO     | PID=31223 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 20:17:59] 2025-10-19 00:17:58,924 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 20:17:59] 2025-10-19 00:17:58,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 20:17:59] 2025-10-19 00:17:58,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 20:17:59] 2025-10-19 00:17:58,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 20:17:59] 2025-10-19 00:17:58,924 | INFO     | [monitor] control thread has ended
[2025-10-18 20:17:59] 2025-10-19 00:17:59,021 [wrapper] ==== pilot stdout END ====
[2025-10-18 20:17:59] 2025-10-19 00:17:59,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 20:17:59] 2025-10-19 00:17:59,029 [wrapper] pilotpid: 31223
[2025-10-18 20:17:59] 2025-10-19 00:17:59,032 [wrapper] Pilot exit status: 0
[2025-10-18 20:17:59] 2025-10-19 00:17:59,048 [wrapper] pandaids: 6850530454
[2025-10-18 20:17:59] 2025-10-19 00:17:59,091 [wrapper] cleanup supervisor_pilot  2927 31224
[2025-10-18 20:17:59] 2025-10-19 00:17:59,095 [wrapper] Test setup, not cleaning
[2025-10-18 20:17:59] 2025-10-19 00:17:59,099 [wrapper] apfmon messages muted
[2025-10-18 20:17:59] 2025-10-19 00:17:59,103 [wrapper] ==== wrapper stdout END ====
[2025-10-18 20:17:59] 2025-10-19 00:17:59,107 [wrapper] ==== wrapper stderr END ====
[2025-10-18 20:17:59]  *** Error codes and diagnostics ***
[2025-10-18 20:17:59]     "exeErrorCode": 0,
[2025-10-18 20:17:59]     "exeErrorDiag": "",
[2025-10-18 20:17:59]     "pilotErrorCode": 0,
[2025-10-18 20:17:59]     "pilotErrorDiag": "",
[2025-10-18 20:17:59]  *** Listing of results directory ***
[2025-10-18 20:17:59] total 334892
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 15:44 pilot3.tar.gz
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 15:48 queuedata.json
[2025-10-18 20:17:59] -rwx------ 1 boincer umatlas     36292 Oct 18 15:49 runpilot2-wrapper.sh
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas       100 Oct 18 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 20:17:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 19:21 run_atlas
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas       105 Oct 18 19:21 job.xml
[2025-10-18 20:17:59] -rw-r--r-- 2 boincer umatlas 191438551 Oct 18 19:21 EVNT.46808900._000194.pool.root.1
[2025-10-18 20:17:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 19:21 start_atlas.sh
[2025-10-18 20:17:59] drwxrwx--x 2 boincer umatlas      4096 Oct 18 19:21 shared
[2025-10-18 20:17:59] -rw-r--r-- 2 boincer umatlas    569671 Oct 18 19:21 input.tar.gz
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas         0 Oct 18 19:21 boinc_lockfile
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas      2503 Oct 18 19:21 pandaJob.out
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas    976742 Oct 18 19:21 agis_schedconf.cvmfs.json
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas   1560740 Oct 18 19:21 agis_ddmendpoints.agis.ALL.json
[2025-10-18 20:17:59] drwx------ 5 boincer umatlas      4096 Oct 18 19:21 pilot3
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas      5952 Oct 18 20:11 init_data.xml
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas 145854181 Oct 18 20:16 HITS.46808902._004775.pool.root.1
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas      1050 Oct 18 20:17 memory_monitor_summary.json
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas    369654 Oct 18 20:17 log.46808902._004775.job.log.tgz.1
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas      7843 Oct 18 20:17 heartbeat.json
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas        27 Oct 18 20:17 wrapper_checkpoint.txt
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 20:17 boinc_mmap_file
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas       529 Oct 18 20:17 boinc_task_state.xml
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas       745 Oct 18 20:17 pilotlog.txt
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas        95 Oct 18 20:17 pilot_heartbeat.json
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas    497914 Oct 18 20:17 log.46808902._004775.job.log.1
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas       357 Oct 18 20:17 output.list
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas       620 Oct 18 20:17 runtime_log
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas    890880 Oct 18 20:17 result.tar.gz
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 20:17 runtime_log.err
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas       659 Oct 18 20:17 Ib6KDmO6RU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcvcMDmZuM2Mo.diag
[2025-10-18 20:17:59] -rw-r--r-- 1 boincer umatlas     21873 Oct 18 20:17 stderr.txt
[2025-10-18 20:17:59] HITS file was successfully produced:
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas 145854181 Oct 18 20:16 shared/HITS.pool.root.1
[2025-10-18 20:17:59]  *** Contents of shared directory: ***
[2025-10-18 20:17:59] total 330840
[2025-10-18 20:17:59] -rw-r--r-- 2 boincer umatlas 191438551 Oct 18 19:21 ATLAS.root_0
[2025-10-18 20:17:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 19:21 start_atlas.sh
[2025-10-18 20:17:59] -rw-r--r-- 2 boincer umatlas    569671 Oct 18 19:21 input.tar.gz
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas 145854181 Oct 18 20:16 HITS.pool.root.1
[2025-10-18 20:17:59] -rw------- 1 boincer umatlas    890880 Oct 18 20:17 result.tar.gz
20:18:00 (27546): run_atlas exited; CPU time 35497.551418
20:18:00 (27546): called boinc_finish(0)

</stderr_txt>
]]>

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