Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:58 (709092): wrapper (7.7.26015): starting
19:02:58 (709092): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 19:02:58] Arguments: --nthreads 4
[2025-10-18 19:02:58] Threads: 4
[2025-10-18 19:02:58] Checking for CVMFS
[2025-10-18 19:02:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 19:02:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 19:02:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 19:02:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 19:02:59] 2.13.2.0 3302186 4146 62536 151867 3 188 3741256 4096000 13757 130560 0 25325979 99.999 146834 898 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-18 19:02:59] CVMFS is ok
[2025-10-18 19:02:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 19:02:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-18 19:02:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-18 19:02:59] Further information can be found at the LHC@home message board.
[2025-10-18 19:02:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 19:02:59] Checking for apptainer binary...
[2025-10-18 19:02:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 19:02:59] Running /usr/bin/apptainer --version
[2025-10-18 19:02:59] apptainer version 1.4.3
[2025-10-18 19:02:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 19:02:59] T7810-Ubuntu
[2025-10-18 19:02:59] apptainer works
[2025-10-18 19:02:59] Set ATHENA_PROC_NUMBER=4
[2025-10-18 19:02:59] Set ATHENA_CORE_NUMBER=4
[2025-10-18 19:02:59] Starting ATLAS job with PandaID=6846773685
[2025-10-18 19:02:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 22:35:41]  *** The last 200 lines of the pilot log: ***
[2025-10-18 22:35:41] 2025-10-19 02:34:46,922 | INFO     | sum of square deviations: 2790348132.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,924 | INFO     | sum of deviations: 16700816405.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,924 | INFO     | mean x: 1760834936.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,924 | INFO     | mean y: 2290152.918269231
[2025-10-18 22:35:41] 2025-10-19 02:34:46,924 | INFO     | -- intersect: -10536674737.38695
[2025-10-18 22:35:41] 2025-10-19 02:34:46,925 | INFO     | intersect: -10536674737.38695
[2025-10-18 22:35:41] 2025-10-19 02:34:46,925 | INFO     | chi2: 2.092393526475809
[2025-10-18 22:35:41] 2025-10-19 02:34:46,925 | INFO     | sum of square deviations: 2593916542.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,927 | INFO     | sum of deviations: 27911421995.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,927 | INFO     | mean x: 1760834784.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,927 | INFO     | mean y: 2298676.280788177
[2025-10-18 22:35:41] 2025-10-19 02:34:46,927 | INFO     | -- intersect: -18944880974.227287
[2025-10-18 22:35:41] 2025-10-19 02:34:46,927 | INFO     | intersect: -18944880974.227287
[2025-10-18 22:35:41] 2025-10-19 02:34:46,928 | INFO     | chi2: 1.4224933076563433
[2025-10-18 22:35:41] 2025-10-19 02:34:46,928 | INFO     | current chi2=1.4224933076563433 (change=32.01597645676958 %)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,928 | INFO     | sum of square deviations: 2406926989.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,930 | INFO     | sum of deviations: 27015186845.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,930 | INFO     | mean x: 1760834631.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,930 | INFO     | mean y: 2297945.207070707
[2025-10-18 22:35:41] 2025-10-19 02:34:46,930 | INFO     | -- intersect: -19761191675.174557
[2025-10-18 22:35:41] 2025-10-19 02:34:46,930 | INFO     | intersect: -19761191675.174557
[2025-10-18 22:35:41] 2025-10-19 02:34:46,931 | INFO     | chi2: 1.4233623116256315
[2025-10-18 22:35:41] 2025-10-19 02:34:46,931 | INFO     | current chi2=1.4233623116256315 (change=-0.061090197374635426 %)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,931 | INFO     | right removable region: 197
[2025-10-18 22:35:41] 2025-10-19 02:34:46,931 | INFO     | sum of square deviations: 2593916542.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,933 | INFO     | sum of deviations: -10333560795.999998
[2025-10-18 22:35:41] 2025-10-19 02:34:46,933 | INFO     | mean x: 1760835089.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,933 | INFO     | mean y: 2310876.8768472904
[2025-10-18 22:35:41] 2025-10-19 02:34:46,933 | INFO     | -- intersect: 7017068734.075311
[2025-10-18 22:35:41] 2025-10-19 02:34:46,933 | INFO     | intersect: 7017068734.075311
[2025-10-18 22:35:41] 2025-10-19 02:34:46,934 | INFO     | chi2: 0.7082180981349201
[2025-10-18 22:35:41] 2025-10-19 02:34:46,934 | INFO     | current chi2=0.7082180981349201 (change=66.15272943767118 %)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,934 | INFO     | sum of square deviations: 2406926989.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,936 | INFO     | sum of deviations: -7254511223.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,936 | INFO     | mean x: 1760835241.5
[2025-10-18 22:35:41] 2025-10-19 02:34:46,936 | INFO     | mean y: 2308346.772727273
[2025-10-18 22:35:41] 2025-10-19 02:34:46,936 | INFO     | -- intersect: 5309490109.21151
[2025-10-18 22:35:41] 2025-10-19 02:34:46,936 | INFO     | intersect: 5309490109.21151
[2025-10-18 22:35:41] 2025-10-19 02:34:46,937 | INFO     | chi2: 0.6969491733814591
[2025-10-18 22:35:41] 2025-10-19 02:34:46,937 | INFO     | monitor loop #910: job 0:6846773685 is in state 'finished'
[2025-10-18 22:35:41] 2025-10-19 02:34:46,937 | INFO     | current chi2=0.6969491733814591 (change=1.591165882817382 %)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,938 | INFO     | left removable region: 20
[2025-10-18 22:35:41] 2025-10-19 02:34:46,938 | INFO     | sum of square deviations: 1719429448.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,939 | INFO     | sum of deviations: 4825312219.000001
[2025-10-18 22:35:41] 2025-10-19 02:34:46,939 | INFO     | mean x: 1760835211.0
[2025-10-18 22:35:41] 2025-10-19 02:34:46,940 | INFO     | mean y: 2316374.9830508474
[2025-10-18 22:35:41] 2025-10-19 02:34:46,940 | INFO     | -- intersect: -4939194699.616007
[2025-10-18 22:35:41] 2025-10-19 02:34:46,940 | INFO     | intersect: -4939194699.616007
[2025-10-18 22:35:41] 2025-10-19 02:34:46,940 | INFO     | chi2: 0.0009412473981341106
[2025-10-18 22:35:41] 2025-10-19 02:34:46,940 | INFO     | -- intersect: -4939194699.616007
[2025-10-18 22:35:41] 2025-10-19 02:34:46,941 | INFO     | current memory leak: 2.81 B/s (using 177 data points, chi2=0.00)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,941 | INFO     | could have reported an average CPU frequency of 2619 MHz (11 samples)
[2025-10-18 22:35:41] 2025-10-19 02:34:46,941 | INFO     | ..............................
[2025-10-18 22:35:41] 2025-10-19 02:34:46,941 | INFO     | . Timing measurements:
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . get job = 0 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . initial setup = 3 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . payload setup = 7 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . stage-in = 0 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . payload execution = 12654 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . stage-out = 3 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | . log creation = 0 s
[2025-10-18 22:35:41] 2025-10-19 02:34:46,942 | INFO     | ..............................
[2025-10-18 22:35:41] 2025-10-19 02:34:47,052 | INFO     | 
[2025-10-18 22:35:41] 2025-10-19 02:34:47,052 | INFO     | job summary report
[2025-10-18 22:35:41] 2025-10-19 02:34:47,052 | INFO     | --------------------------------------------------
[2025-10-18 22:35:41] 2025-10-19 02:34:47,052 | INFO     | PanDA job id: 6846773685
[2025-10-18 22:35:41] 2025-10-19 02:34:47,052 | INFO     | task id: 46771637
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | errors: (none)
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | pilot state: finished 
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | transexitcode: 0
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | exeerrorcode: 0
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | exeerrordiag: 
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | exitcode: 0
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | exitmsg: OK
[2025-10-18 22:35:41] 2025-10-19 02:34:47,053 | INFO     | cpuconsumptiontime: 49265 s
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | nevents: 400
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | neventsw: 0
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | pid: 720440
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | pgrp: 720440
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | corecount: 4
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | event service: False
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | sizes: {0: 2348936, 1: 2348936, 5: 2349226, 11: 2349282, 12665: 2379175, 12669: 2388203, 12672: 2388387, 12677: 2388581}
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | --------------------------------------------------
[2025-10-18 22:35:41] 2025-10-19 02:34:47,054 | INFO     | 
[2025-10-18 22:35:41] 2025-10-19 02:34:47,055 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/25
[2025-10-18 22:35:41] 2025-10-19 02:34:47,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 22:35:41] 2025-10-19 02:34:47,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 22:35:41] 2025-10-19 02:34:47,081 | INFO     | job 6846773685 has completed (purged errors)
[2025-10-18 22:35:41] 2025-10-19 02:34:47,081 | INFO     | overall cleanup function is called
[2025-10-18 22:35:41] 2025-10-19 02:34:48,090 | INFO     | --- collectZombieJob: --- 10, [720440]
[2025-10-18 22:35:41] 2025-10-19 02:34:48,090 | INFO     | zombie collector waiting for pid 720440
[2025-10-18 22:35:41] 2025-10-19 02:34:48,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 22:35:41] 2025-10-19 02:34:48,091 | INFO     | collected zombie processes
[2025-10-18 22:35:41] 2025-10-19 02:34:48,091 | INFO     | will attempt to kill all subprocesses of pid=720440
[2025-10-18 22:35:41] 2025-10-19 02:34:48,635 | INFO     | process IDs to be killed: [720440] (in reverse order)
[2025-10-18 22:35:41] 2025-10-19 02:34:48,771 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 22:35:41] 2025-10-19 02:34:48,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 22:35:41] 2025-10-19 02:34:48,785 | INFO     | did not find any defunct processes belonging to 720440
[2025-10-18 22:35:41] 2025-10-19 02:34:48,795 | INFO     | did not find any defunct processes belonging to 720440
[2025-10-18 22:35:41] 2025-10-19 02:34:48,796 | INFO     | ready for new job
[2025-10-18 22:35:41] 2025-10-19 02:34:48,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 22:35:41] 2025-10-19 02:34:48,798 | INFO     | ***************************************
[2025-10-18 22:35:41] 2025-10-19 02:34:48,798 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 22:35:41] 2025-10-19 02:34:48,799 | INFO     | ***************************************
[2025-10-18 22:35:41] 2025-10-19 02:34:48,799 | INFO     | 
[2025-10-18 22:35:41] 2025-10-19 02:34:48,802 | INFO     | architecture information:
[2025-10-18 22:35:41] 2025-10-19 02:34:48,803 | INFO     | executing command: cat /etc/os-release
[2025-10-18 22:35:41] 2025-10-19 02:34:48,823 | INFO     | cat /etc/os-release:
[2025-10-18 22:35:41] NAME="CentOS Linux"
[2025-10-18 22:35:41] VERSION="7 (Core)"
[2025-10-18 22:35:41] ID="centos"
[2025-10-18 22:35:41] ID_LIKE="rhel fedora"
[2025-10-18 22:35:41] VERSION_ID="7"
[2025-10-18 22:35:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 22:35:41] ANSI_COLOR="0;31"
[2025-10-18 22:35:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 22:35:41] HOME_URL="https://www.centos.org/"
[2025-10-18 22:35:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 22:35:41] 
[2025-10-18 22:35:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 22:35:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 22:35:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 22:35:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 22:35:41] 
[2025-10-18 22:35:41] 2025-10-19 02:34:48,824 | INFO     | ***************************************
[2025-10-18 22:35:41] 2025-10-19 02:34:49,326 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/25
[2025-10-18 22:35:41] 2025-10-19 02:34:49,343 | INFO     | sufficient remaining disk space (398882504704 B)
[2025-10-18 22:35:41] 2025-10-19 02:34:49,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 22:35:41] 2025-10-19 02:34:49,344 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 22:35:41] 2025-10-19 02:34:49,344 | INFO     | update_server=False
[2025-10-18 22:35:41] 2025-10-19 02:34:49,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 22:35:41] 2025-10-19 02:34:49,441 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 22:35:41] 2025-10-19 02:34:49,441 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 22:35:41] 2025-10-19 02:34:49,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 22:35:41] 2025-10-19 02:34:49,441 | INFO     | will abort loop
[2025-10-18 22:35:41] 2025-10-19 02:34:49,461 | INFO     | all data control threads have been joined
[2025-10-18 22:35:41] 2025-10-19 02:34:49,748 | INFO     | all payload control threads have been joined
[2025-10-18 22:35:41] 2025-10-19 02:34:50,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 22:35:41] 2025-10-19 02:34:50,258 | INFO     | all job control threads have been joined
[2025-10-18 22:35:41] 2025-10-19 02:34:50,349 | INFO     | [job] retrieve thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,446 | INFO     | [job] job monitor thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,466 | INFO     | [data] control thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,571 | INFO     | [data] copytool_in thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,572 | INFO     | [payload] validate_post thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,753 | INFO     | [payload] control thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:50,833 | INFO     | [job] validate thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:51,061 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:51,263 | INFO     | [job] control thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:51,436 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:51,472 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:51,618 | INFO     | [payload] failed_post thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:52,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 22:35:41] 2025-10-19 02:34:52,075 | INFO     | [data] copytool_out thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:52,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 22:35:41] 2025-10-19 02:34:53,068 | INFO     | [job] queue monitor thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:34:56,520 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 22:35:41] 2025-10-19 02:35:20,207 | INFO     | PID=713474 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-18 22:35:41] 2025-10-19 02:35:20,207 | INFO     | .. there are 16 such processes running
[2025-10-18 22:35:41] 2025-10-19 02:35:20,208 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 22:35:41] 2025-10-19 02:35:20,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 22:35:41] 2025-10-19 02:35:20,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 22:35:41] 2025-10-19 02:35:33,980 | INFO     | [monitor] cgroup control has ended
[2025-10-18 22:35:41] 2025-10-19 02:35:36,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131311923144512)>', '<ExcThread(monitor, started 131311301814016)>']
[2025-10-18 22:35:41] 2025-10-19 02:35:36,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 22:35:41] 2025-10-19 02:35:36,287 | INFO     | [monitor] control thread has ended
[2025-10-18 22:35:41] 2025-10-19 02:35:41,056 | INFO     | all workflow threads have been joined
[2025-10-18 22:35:41] 2025-10-19 02:35:41,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 22:35:41] 2025-10-19 02:35:41,056 | INFO     | traces error code: 0
[2025-10-18 22:35:41] 2025-10-19 02:35:41,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 22:35:41] 2025-10-19 02:35:41,185 [wrapper] ==== pilot stdout END ====
[2025-10-18 22:35:41] 2025-10-19 02:35:41,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 22:35:41] 2025-10-19 02:35:41,191 [wrapper] pilotpid: 713474
[2025-10-18 22:35:41] 2025-10-19 02:35:41,194 [wrapper] Pilot exit status: 0
[2025-10-18 22:35:41] 2025-10-19 02:35:41,206 [wrapper] pandaids: 6846773685
[2025-10-18 22:35:41] 2025-10-19 02:35:41,282 [wrapper] cleanup supervisor_pilot 1294396 713475
[2025-10-18 22:35:41] 2025-10-19 02:35:41,286 [wrapper] Test setup, not cleaning
[2025-10-18 22:35:41] 2025-10-19 02:35:41,289 [wrapper] apfmon messages muted
[2025-10-18 22:35:41] 2025-10-19 02:35:41,292 [wrapper] ==== wrapper stdout END ====
[2025-10-18 22:35:41] 2025-10-19 02:35:41,296 [wrapper] ==== wrapper stderr END ====
[2025-10-18 22:35:41]  *** Error codes and diagnostics ***
[2025-10-18 22:35:41]     "exeErrorCode": 0,
[2025-10-18 22:35:41]     "exeErrorDiag": "",
[2025-10-18 22:35:41]     "pilotErrorCode": 0,
[2025-10-18 22:35:41]     "pilotErrorDiag": "",
[2025-10-18 22:35:41]  *** Listing of results directory ***
[2025-10-18 22:35:41] total 427360
[2025-10-18 22:35:41] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 15 19:33 pilot3.tar.gz
[2025-10-18 22:35:41] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 15 20:05 queuedata.json
[2025-10-18 22:35:41] -rwx------ 1 whitlerd whitlerd     36292 Oct 15 20:06 runpilot2-wrapper.sh
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 18 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 22:35:41] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 18 19:02 run_atlas
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 18 19:02 job.xml
[2025-10-18 22:35:41] -rw-r--r-- 2 whitlerd whitlerd 228431922 Oct 18 19:02 EVNT.46771634._000251.pool.root.1
[2025-10-18 22:35:41] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 18 19:02 start_atlas.sh
[2025-10-18 22:35:41] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 18 19:02 shared
[2025-10-18 22:35:41] -rw-r--r-- 2 whitlerd whitlerd    569669 Oct 18 19:02 input.tar.gz
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 18 19:02 init_data.xml
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 18 19:02 boinc_setup_complete
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 18 19:02 boinc_lockfile
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd      2553 Oct 18 19:02 pandaJob.out
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd    976750 Oct 18 19:03 agis_schedconf.cvmfs.json
[2025-10-18 22:35:41] drwx------ 5 whitlerd whitlerd      4096 Oct 18 19:03 pilot3
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd 200891222 Oct 18 22:33 HITS.46771637._003749.pool.root.1
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 18 22:33 boinc_task_state.xml
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd      1046 Oct 18 22:34 memory_monitor_summary.json
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd   1560740 Oct 18 22:34 agis_ddmendpoints.agis.ALL.json
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd    397152 Oct 18 22:34 log.46771637._003749.job.log.tgz.1
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd      7797 Oct 18 22:34 heartbeat.json
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd        95 Oct 18 22:35 pilot_heartbeat.json
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 18 22:35 boinc_mmap_file
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 18 22:35 wrapper_checkpoint.txt
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd      5025 Oct 18 22:35 pilotlog.txt
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd   1796571 Oct 18 22:35 log.46771637._003749.job.log.1
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd       357 Oct 18 22:35 output.list
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 18 22:35 runtime_log
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd   2211840 Oct 18 22:35 result.tar.gz
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 18 22:35 runtime_log.err
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd       651 Oct 18 22:35 KxpKDmAhQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5VoNDmlocHTo.diag
[2025-10-18 22:35:41] -rw-rw-r-- 1 whitlerd whitlerd     21084 Oct 18 22:35 stderr.txt
[2025-10-18 22:35:41] HITS file was successfully produced:
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd 200891222 Oct 18 22:33 shared/HITS.pool.root.1
[2025-10-18 22:35:41]  *** Contents of shared directory: ***
[2025-10-18 22:35:41] total 422008
[2025-10-18 22:35:41] -rw-r--r-- 2 whitlerd whitlerd 228431922 Oct 18 19:02 ATLAS.root_0
[2025-10-18 22:35:41] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 18 19:02 start_atlas.sh
[2025-10-18 22:35:41] -rw-r--r-- 2 whitlerd whitlerd    569669 Oct 18 19:02 input.tar.gz
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd 200891222 Oct 18 22:33 HITS.pool.root.1
[2025-10-18 22:35:41] -rw------- 1 whitlerd whitlerd   2211840 Oct 18 22:35 result.tar.gz
22:35:42 (709092): run_atlas exited; CPU time 49925.971761
22:35:42 (709092): called boinc_finish(0)

</stderr_txt>
]]>

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