Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:53 (1832243): wrapper (7.7.26015): starting
07:48:53 (1832243): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 07:48:53] Arguments: --nthreads 4
[2025-10-19 07:48:53] Threads: 4
[2025-10-19 07:48:53] Checking for CVMFS
[2025-10-19 07:48:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 07:48:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 07:48:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 07:48:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 07:48:53] 2.9.2.0 328193 4510 97620 151876 0 57 24730286 36864001 0 130560 0 3943553 99.992 161078 2207 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 07:48:53] CVMFS is ok
[2025-10-19 07:48:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 07:48:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 07:48:53] Further information can be found at the LHC@home message board.
[2025-10-19 07:48:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 07:48:53] Checking for apptainer binary...
[2025-10-19 07:48:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 07:48:53] Running /usr/bin/apptainer --version
[2025-10-19 07:48:53] apptainer version 1.4.1-1.1
[2025-10-19 07:48:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 07:48:53] cosA131b
[2025-10-19 07:48:53] apptainer works
[2025-10-19 07:48:53] Set ATHENA_PROC_NUMBER=4
[2025-10-19 07:48:53] Set ATHENA_CORE_NUMBER=4
[2025-10-19 07:48:53] Starting ATLAS job with PandaID=6850363951
[2025-10-19 07:48:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 08:46:17]  *** The last 200 lines of the pilot log: ***
[2025-10-19 08:46:17] 2025-10-19 06:45:39,082 | INFO     | summary of transferred files:
[2025-10-19 08:46:17] 2025-10-19 06:45:39,082 | INFO     |  -- lfn=log.46809188._002812.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 08:46:17] 2025-10-19 06:45:39,082 | INFO     | stage-out finished correctly
[2025-10-19 08:46:17] 2025-10-19 06:45:39,118 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 08:46:17] 2025-10-19 06:45:39,890 | WARNING  | process 1842607 can no longer be monitored (due to stat problems) - aborting
[2025-10-19 08:46:17] 2025-10-19 06:45:39,890 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6850363951/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,890 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6850363951/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,890 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-19 08:46:17] 2025-10-19 06:45:39,890 | WARNING  | maxPSS not found in memory monitor output
[2025-10-19 08:46:17] 2025-10-19 06:45:39,891 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2074915 B
[2025-10-19 08:46:17] 2025-10-19 06:45:39,891 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15394 B
[2025-10-19 08:46:17] 2025-10-19 06:45:39,891 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 08:46:17] 2025-10-19 06:45:39,906 | INFO     | sufficient remaining disk space (332263325696 B)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,906 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,907 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6850363951: 2363202 B (within 2537553920 B limit)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,907 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6850363951/HITS.46809188._002812.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,907 | INFO     | total size of present files: 0 B (workdir size: 2363202 B)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,907 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6850363951/HITS.46809188._002812.pool.root.1 since it does not exist
[2025-10-19 08:46:17] 2025-10-19 06:45:39,929 | INFO     | time since job start (3398s) is within the limit (172800.0s)
[2025-10-19 08:46:17] 2025-10-19 06:45:39,945 | INFO     | number of running child processes to parent process 1842607: 1
[2025-10-19 08:46:17] 2025-10-19 06:45:39,945 | INFO     | maximum number of monitored processes: 6
[2025-10-19 08:46:17] 2025-10-19 06:45:40,361 | INFO     | job 6850363951 has state=finished
[2025-10-19 08:46:17] 2025-10-19 06:45:40,361 | INFO     | preparing for final server update for job 6850363951 in state='finished'
[2025-10-19 08:46:17] 2025-10-19 06:45:40,362 | INFO     | this job has now completed (state=finished)
[2025-10-19 08:46:17] 2025-10-19 06:45:40,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 08:46:17] 2025-10-19 06:45:40,362 | INFO     | log transfer has been attempted: DONE
[2025-10-19 08:46:17] 2025-10-19 06:45:40,362 | INFO     | job 6850363951 has finished - writing final server update
[2025-10-19 08:46:17] 2025-10-19 06:45:40,362 | INFO     | total number of processed events: 400 (read)
[2025-10-19 08:46:17] 2025-10-19 06:45:40,363 | INFO     | executing command: lscpu
[2025-10-19 08:46:17] 2025-10-19 06:45:40,384 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 08:46:17] 2025-10-19 06:45:41,935 | INFO     | time since job start (3400s) is within the limit (172800.0s)
[2025-10-19 08:46:17] 2025-10-19 06:45:42,448 | INFO     | monitor loop #263: job 0:6850363951 is in state 'finished'
[2025-10-19 08:46:17] 2025-10-19 06:45:42,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 08:46:17] 2025-10-19 06:45:43,940 | INFO     | time since job start (3402s) is within the limit (172800.0s)
[2025-10-19 08:46:17] 2025-10-19 06:45:44,951 | INFO     | monitor loop #264: job 0:6850363951 is in state 'finished'
[2025-10-19 08:46:17] 2025-10-19 06:45:44,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,081 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 08:46:17] 2025-10-19 06:45:45,082 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3479.0599375
[2025-10-19 08:46:17] 2025-10-19 06:45:45,084 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6850363951/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,084 | INFO     | extracted standard info from prmon json
[2025-10-19 08:46:17] 2025-10-19 06:45:45,084 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 08:46:17] 2025-10-19 06:45:45,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 08:46:17] 2025-10-19 06:45:45,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 08:46:17] 2025-10-19 06:45:45,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | fitting pss+swap vs Time
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | sum of square deviations: 36465800.0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | sum of deviations: -4717975338.000001
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | mean x: 1760854733.0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | mean y: 2463426.0204081633
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | -- intersect: 227823303887.34515
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | intersect: 227823303887.34515
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | chi2: 0.08292714001275397
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | -- intersect: 227823303887.34515
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | current memory leak: -129.38 B/s (using 49 data points, chi2=0.08)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | could have reported an average CPU frequency of 3577 MHz (5 samples)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | ..............................
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | . Timing measurements:
[2025-10-19 08:46:17] 2025-10-19 06:45:45,085 | INFO     | . get job = 0 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | . initial setup = 1 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | . payload setup = 4 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | . stage-in = 0 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | . payload execution = 3374 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | . stage-out = 0 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | . log creation = 0 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,086 | INFO     | ..............................
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | 
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | job summary report
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | --------------------------------------------------
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | PanDA job id: 6850363951
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | task id: 46809188
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | errors: (none)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | pilot state: finished 
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | transexitcode: 0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | exeerrorcode: 0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | exeerrordiag: 
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | exitcode: 0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | exitmsg: OK
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | cpuconsumptiontime: 12610 s
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | nevents: 400
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | neventsw: 0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | pid: 1842607
[2025-10-19 08:46:17] 2025-10-19 06:45:45,127 | INFO     | pgrp: 1842607
[2025-10-19 08:46:17] 2025-10-19 06:45:45,128 | INFO     | corecount: 4
[2025-10-19 08:46:17] 2025-10-19 06:45:45,128 | INFO     | event service: False
[2025-10-19 08:46:17] 2025-10-19 06:45:45,128 | INFO     | sizes: {0: 2348839, 4: 2349101, 11: 2349129, 3382: 2374817, 3384: 2383877, 3390: 2384075}
[2025-10-19 08:46:17] 2025-10-19 06:45:45,128 | INFO     | --------------------------------------------------
[2025-10-19 08:46:17] 2025-10-19 06:45:45,128 | INFO     | 
[2025-10-19 08:46:17] 2025-10-19 06:45:45,128 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | job 6850363951 has completed (purged errors)
[2025-10-19 08:46:17] 2025-10-19 06:45:45,148 | INFO     | overall cleanup function is called
[2025-10-19 08:46:17] 2025-10-19 06:45:46,155 | INFO     | --- collectZombieJob: --- 10, [1842607]
[2025-10-19 08:46:17] 2025-10-19 06:45:46,155 | INFO     | zombie collector waiting for pid 1842607
[2025-10-19 08:46:17] 2025-10-19 06:45:46,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 08:46:17] 2025-10-19 06:45:46,155 | INFO     | collected zombie processes
[2025-10-19 08:46:17] 2025-10-19 06:45:46,155 | INFO     | will attempt to kill all subprocesses of pid=1842607
[2025-10-19 08:46:17] 2025-10-19 06:45:46,200 | INFO     | process IDs to be killed: [1842607] (in reverse order)
[2025-10-19 08:46:17] 2025-10-19 06:45:46,234 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 08:46:17] 2025-10-19 06:45:46,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 08:46:17] 2025-10-19 06:45:46,236 | INFO     | did not find any defunct processes belonging to 1842607
[2025-10-19 08:46:17] 2025-10-19 06:45:46,237 | INFO     | did not find any defunct processes belonging to 1842607
[2025-10-19 08:46:17] 2025-10-19 06:45:46,238 | INFO     | ready for new job
[2025-10-19 08:46:17] 2025-10-19 06:45:46,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 08:46:17] 2025-10-19 06:45:46,238 | INFO     | ***************************************
[2025-10-19 08:46:17] 2025-10-19 06:45:46,238 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 08:46:17] 2025-10-19 06:45:46,238 | INFO     | ***************************************
[2025-10-19 08:46:17] 2025-10-19 06:45:46,238 | INFO     | 
[2025-10-19 08:46:17] 2025-10-19 06:45:46,239 | INFO     | architecture information:
[2025-10-19 08:46:17] 2025-10-19 06:45:46,239 | INFO     | executing command: cat /etc/os-release
[2025-10-19 08:46:17] 2025-10-19 06:45:46,253 | INFO     | cat /etc/os-release:
[2025-10-19 08:46:17] NAME="CentOS Linux"
[2025-10-19 08:46:17] VERSION="7 (Core)"
[2025-10-19 08:46:17] ID="centos"
[2025-10-19 08:46:17] ID_LIKE="rhel fedora"
[2025-10-19 08:46:17] VERSION_ID="7"
[2025-10-19 08:46:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 08:46:17] ANSI_COLOR="0;31"
[2025-10-19 08:46:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 08:46:17] HOME_URL="https://www.centos.org/"
[2025-10-19 08:46:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 08:46:17] 
[2025-10-19 08:46:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 08:46:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 08:46:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 08:46:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 08:46:17] 
[2025-10-19 08:46:17] 2025-10-19 06:45:46,253 | INFO     | ***************************************
[2025-10-19 08:46:17] 2025-10-19 06:45:46,756 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 08:46:17] 2025-10-19 06:45:46,774 | INFO     | sufficient remaining disk space (332266471424 B)
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | INFO     | update_server=False
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | INFO     | aborting loop
[2025-10-19 08:46:17] 2025-10-19 06:45:46,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 08:46:17] 2025-10-19 06:45:46,959 | INFO     | all data control threads have been joined
[2025-10-19 08:46:17] 2025-10-19 06:45:47,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 08:46:17] 2025-10-19 06:45:47,442 | INFO     | all job control threads have been joined
[2025-10-19 08:46:17] 2025-10-19 06:45:47,781 | INFO     | [job] retrieve thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:47,781 | INFO     | [job] job monitor thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:47,781 | INFO     | [job] queue monitor thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:47,792 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:47,861 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:47,965 | INFO     | [data] control thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:48,092 | INFO     | [payload] validate_post thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:48,197 | INFO     | all payload control threads have been joined
[2025-10-19 08:46:17] 2025-10-19 06:45:48,407 | INFO     | [data] copytool_in thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:48,444 | INFO     | [job] control thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:48,813 | INFO     | [payload] failed_post thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:48,962 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:49,137 | INFO     | [data] copytool_out thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:49,172 | INFO     | [job] validate thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:49,202 | INFO     | [payload] control thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:49,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 08:46:17] 2025-10-19 06:45:53,668 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:45:56,984 | INFO     | job.realtimelogging is not enabled
[2025-10-19 08:46:17] 2025-10-19 06:45:57,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 08:46:17] 2025-10-19 06:46:04,931 | INFO     | [monitor] cgroup control has ended
[2025-10-19 08:46:17] 2025-10-19 06:46:05,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738036782912)>', '<ExcThread(monitor, started 139737381705472)>']
[2025-10-19 08:46:17] 2025-10-19 06:46:10,229 | INFO     | all workflow threads have been joined
[2025-10-19 08:46:17] 2025-10-19 06:46:10,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 08:46:17] 2025-10-19 06:46:10,229 | INFO     | traces error code: 0
[2025-10-19 08:46:17] 2025-10-19 06:46:10,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 08:46:17] 2025-10-19 06:46:17,063 | INFO     | PID=1836027 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 08:46:17] 2025-10-19 06:46:17,063 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 08:46:17] 2025-10-19 06:46:17,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 08:46:17] 2025-10-19 06:46:17,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 08:46:17] 2025-10-19 06:46:17,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 08:46:17] 2025-10-19 06:46:17,063 | INFO     | [monitor] control thread has ended
[2025-10-19 08:46:17] 2025-10-19 06:46:17,139 [wrapper] ==== pilot stdout END ====
[2025-10-19 08:46:17] 2025-10-19 06:46:17,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 08:46:17] 2025-10-19 06:46:17,147 [wrapper] pilotpid: 1836027
[2025-10-19 08:46:17] 2025-10-19 06:46:17,151 [wrapper] Pilot exit status: 0
[2025-10-19 08:46:17] 2025-10-19 06:46:17,163 [wrapper] pandaids: 6850363951
[2025-10-19 08:46:17] 2025-10-19 06:46:17,184 [wrapper] cleanup supervisor_pilot 1852061 1836028
[2025-10-19 08:46:17] 2025-10-19 06:46:17,188 [wrapper] Test setup, not cleaning
[2025-10-19 08:46:17] 2025-10-19 06:46:17,192 [wrapper] apfmon messages muted
[2025-10-19 08:46:17] 2025-10-19 06:46:17,196 [wrapper] ==== wrapper stdout END ====
[2025-10-19 08:46:17] 2025-10-19 06:46:17,200 [wrapper] ==== wrapper stderr END ====
[2025-10-19 08:46:17]  *** Error codes and diagnostics ***
[2025-10-19 08:46:17]     "exeErrorCode": 0,
[2025-10-19 08:46:17]     "exeErrorDiag": "",
[2025-10-19 08:46:17]     "pilotErrorCode": 0,
[2025-10-19 08:46:17]     "pilotErrorDiag": "",
[2025-10-19 08:46:17]  *** Listing of results directory ***
[2025-10-19 08:46:17] total 336228
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc    557409 Oct 18 18:53 pilot3.tar.gz
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc      5112 Oct 18 18:56 queuedata.json
[2025-10-19 08:46:17] -rwx------ 1 boinc boinc     36292 Oct 18 18:56 runpilot2-wrapper.sh
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc       100 Oct 19 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 08:46:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 07:48 run_atlas
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc       105 Oct 19 07:48 job.xml
[2025-10-19 08:46:17] -rw-r--r-- 2 boinc boinc 191256523 Oct 19 07:48 EVNT.46809186._000110.pool.root.1
[2025-10-19 08:46:17] drwxrwx--x 2 boinc boinc      4096 Oct 19 07:48 shared
[2025-10-19 08:46:17] -rw-r--r-- 2 boinc boinc    569669 Oct 19 07:48 input.tar.gz
[2025-10-19 08:46:17] -rw-r--r-- 2 boinc boinc     15120 Oct 19 07:48 start_atlas.sh
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc         0 Oct 19 07:48 boinc_setup_complete
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc      6378 Oct 19 07:48 init_data.xml
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc         0 Oct 19 07:48 boinc_lockfile
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc      2490 Oct 19 07:48 pandaJob.out
[2025-10-19 08:46:17] -rw------- 1 boinc boinc    976750 Oct 19 07:49 agis_schedconf.cvmfs.json
[2025-10-19 08:46:17] -rw------- 1 boinc boinc   1560740 Oct 19 07:49 agis_ddmendpoints.agis.ALL.json
[2025-10-19 08:46:17] drwx------ 5 boinc boinc      4096 Oct 19 07:49 pilot3
[2025-10-19 08:46:17] -rw------- 1 boinc boinc        95 Oct 19 08:45 pilot_heartbeat.json
[2025-10-19 08:46:17] -rw------- 1 boinc boinc 147640288 Oct 19 08:45 HITS.46809188._002812.pool.root.1
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc       529 Oct 19 08:45 boinc_task_state.xml
[2025-10-19 08:46:17] -rw------- 1 boinc boinc      1016 Oct 19 08:45 memory_monitor_summary.json
[2025-10-19 08:46:17] -rw------- 1 boinc boinc    235726 Oct 19 08:45 log.46809188._002812.job.log.tgz.1
[2025-10-19 08:46:17] -rw------- 1 boinc boinc      7758 Oct 19 08:45 heartbeat.json
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc        27 Oct 19 08:45 wrapper_checkpoint.txt
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc      8192 Oct 19 08:45 boinc_mmap_file
[2025-10-19 08:46:17] -rw------- 1 boinc boinc       747 Oct 19 08:46 pilotlog.txt
[2025-10-19 08:46:17] -rw------- 1 boinc boinc    515715 Oct 19 08:46 log.46809188._002812.job.log.1
[2025-10-19 08:46:17] -rw------- 1 boinc boinc       357 Oct 19 08:46 output.list
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc       620 Oct 19 08:46 runtime_log
[2025-10-19 08:46:17] -rw------- 1 boinc boinc    768000 Oct 19 08:46 result.tar.gz
[2025-10-19 08:46:17] -rw------- 1 boinc boinc       659 Oct 19 08:46 sBGNDmEPPU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpZcMDmARrlem.diag
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc      8787 Oct 19 08:46 runtime_log.err
[2025-10-19 08:46:17] -rw-r--r-- 1 boinc boinc     22370 Oct 19 08:46 stderr.txt
[2025-10-19 08:46:17] HITS file was successfully produced:
[2025-10-19 08:46:17] -rw------- 1 boinc boinc 147640288 Oct 19 08:45 shared/HITS.pool.root.1
[2025-10-19 08:46:17]  *** Contents of shared directory: ***
[2025-10-19 08:46:17] total 332292
[2025-10-19 08:46:17] -rw-r--r-- 2 boinc boinc 191256523 Oct 19 07:48 ATLAS.root_0
[2025-10-19 08:46:17] -rw-r--r-- 2 boinc boinc    569669 Oct 19 07:48 input.tar.gz
[2025-10-19 08:46:17] -rw-r--r-- 2 boinc boinc     15120 Oct 19 07:48 start_atlas.sh
[2025-10-19 08:46:17] -rw------- 1 boinc boinc 147640288 Oct 19 08:45 HITS.pool.root.1
[2025-10-19 08:46:17] -rw------- 1 boinc boinc    768000 Oct 19 08:46 result.tar.gz
08:46:19 (1832243): run_atlas exited; CPU time 12620.278839
08:46:19 (1832243): called boinc_finish(0)

</stderr_txt>
]]>

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