Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:48:09 (20395): wrapper (7.7.26015): starting
18:48:09 (20395): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 18:48:09] Arguments: --nthreads 8
[2025-10-18 18:48:09] Threads: 8
[2025-10-18 18:48:09] Checking for CVMFS
[2025-10-18 18:48:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 18:48:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 18:48:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 18:48:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 18:48:09] 2.11.2.0 2932 210668 119780 151867 1 59 19398837 20275201 1 130560 1 77670374 99.972 10882425 14241 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 18:48:09] CVMFS is ok
[2025-10-18 18:48:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 18:48:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 18:48:09] Further information can be found at the LHC@home message board.
[2025-10-18 18:48:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 18:48:09] Checking for apptainer binary...
[2025-10-18 18:48:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 18:48:09] Running /usr/bin/apptainer --version
[2025-10-18 18:48:09] apptainer version 1.3.2-1.el7
[2025-10-18 18:48:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 18:48:11] c-204-17.aglt2.org
[2025-10-18 18:48:11] apptainer works
[2025-10-18 18:48:11] Set ATHENA_PROC_NUMBER=8
[2025-10-18 18:48:11] Set ATHENA_CORE_NUMBER=8
[2025-10-18 18:48:11] Starting ATLAS job with PandaID=6850527359
[2025-10-18 18:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 20:28:54]  *** The last 200 lines of the pilot log: ***
[2025-10-18 20:28:54]  scope=mc23_13p6TeV
[2025-10-18 20:28:54]  status=None
[2025-10-18 20:28:54]  status_code=0
[2025-10-18 20:28:54]  storage_token=
[2025-10-18 20:28:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6850527359/log.46808902._003753.job.log.tgz.1
[2025-10-18 20:28:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/45/log.46808902._003753.job.log.tgz.1
[2025-10-18 20:28:54]  workdir=None
[2025-10-18 20:28:54] ]
[2025-10-18 20:28:54] 2025-10-19 00:28:13,791 | INFO     | transferring file log.46808902._003753.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6850527359/log.46808902._003753.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 20:28:54] 2025-10-19 00:28:13,791 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6850527359/log.46808902._003753.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._003753.job
[2025-10-18 20:28:54] 2025-10-19 00:28:13,822 | INFO     | adding to output.list: log.46808902._003753.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/45/log.46808902._003753.job.log.tg
[2025-10-18 20:28:54] 2025-10-19 00:28:13,823 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 20:28:54] 2025-10-19 00:28:13,824 | INFO     | summary of transferred files:
[2025-10-18 20:28:54] 2025-10-19 00:28:13,824 | INFO     |  -- lfn=log.46808902._003753.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 20:28:54] 2025-10-19 00:28:13,824 | INFO     | stage-out finished correctly
[2025-10-18 20:28:54] 2025-10-19 00:28:14,127 | INFO     | PID=24087 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 20:28:54] 2025-10-19 00:28:15,128 | INFO     | time since job start (5986s) is within the limit (172800.0s)
[2025-10-18 20:28:54] 2025-10-19 00:28:15,560 | INFO     | monitor loop #440: job 0:6850527359 is in state 'finished'
[2025-10-18 20:28:54] 2025-10-19 00:28:15,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 20:28:54] 2025-10-19 00:28:16,616 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 20:28:54] 2025-10-19 00:28:16,839 | INFO     | job 6850527359 has state=finished
[2025-10-18 20:28:54] 2025-10-19 00:28:16,840 | INFO     | preparing for final server update for job 6850527359 in state='finished'
[2025-10-18 20:28:54] 2025-10-19 00:28:16,840 | INFO     | this job has now completed (state=finished)
[2025-10-18 20:28:54] 2025-10-19 00:28:16,840 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 20:28:54] 2025-10-19 00:28:16,841 | INFO     | log transfer has been attempted: DONE
[2025-10-18 20:28:54] 2025-10-19 00:28:16,841 | INFO     | job 6850527359 has finished - writing final server update
[2025-10-18 20:28:54] 2025-10-19 00:28:16,841 | INFO     | total number of processed events: 400 (read)
[2025-10-18 20:28:54] 2025-10-19 00:28:16,842 | INFO     | executing command: lscpu
[2025-10-18 20:28:54] 2025-10-19 00:28:16,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 20:28:54] 2025-10-19 00:28:17,134 | INFO     | time since job start (5988s) is within the limit (172800.0s)
[2025-10-18 20:28:54] 2025-10-19 00:28:18,064 | INFO     | monitor loop #441: job 0:6850527359 is in state 'finished'
[2025-10-18 20:28:54] 2025-10-19 00:28:18,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 20:28:54] 2025-10-19 00:28:19,140 | INFO     | time since job start (5990s) is within the limit (172800.0s)
[2025-10-18 20:28:54] 2025-10-19 00:28:20,567 | INFO     | monitor loop #442: job 0:6850527359 is in state 'finished'
[2025-10-18 20:28:54] 2025-10-19 00:28:20,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 20:28:54] 2025-10-19 00:28:21,143 | INFO     | time since job start (5992s) is within the limit (172800.0s)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,542 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 20:28:54] 2025-10-19 00:28:22,546 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-18 20:28:54] 2025-10-19 00:28:22,548 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850527359/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,549 | INFO     | extracted standard info from prmon json
[2025-10-18 20:28:54] 2025-10-19 00:28:22,549 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 20:28:54] 2025-10-19 00:28:22,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 20:28:54] 2025-10-19 00:28:22,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 20:28:54] 2025-10-19 00:28:22,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 20:28:54] 2025-10-19 00:28:22,553 | INFO     | fitting pss+swap vs Time
[2025-10-18 20:28:54] 2025-10-19 00:28:22,553 | INFO     | sum of square deviations: 233641590.0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,554 | INFO     | sum of deviations: -9540064011.999998
[2025-10-18 20:28:54] 2025-10-19 00:28:22,554 | INFO     | mean x: 1760830790.0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,554 | INFO     | mean y: 2534464.5604395606
[2025-10-18 20:28:54] 2025-10-19 00:28:22,554 | INFO     | -- intersect: 71900857237.06223
[2025-10-18 20:28:54] 2025-10-19 00:28:22,554 | INFO     | intersect: 71900857237.06223
[2025-10-18 20:28:54] 2025-10-19 00:28:22,555 | INFO     | chi2: 0.09725395006248268
[2025-10-18 20:28:54] 2025-10-19 00:28:22,555 | INFO     | -- intersect: 71900857237.06223
[2025-10-18 20:28:54] 2025-10-19 00:28:22,555 | INFO     | current memory leak: -40.83 B/s (using 91 data points, chi2=0.10)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,555 | INFO     | could have reported an average CPU frequency of 1950 MHz (7 samples)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,556 | INFO     | ..............................
[2025-10-18 20:28:54] 2025-10-19 00:28:22,556 | INFO     | . Timing measurements:
[2025-10-18 20:28:54] 2025-10-19 00:28:22,556 | INFO     | . get job = 0 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,556 | INFO     | . initial setup = 2 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,556 | INFO     | . payload setup = 8 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,556 | INFO     | . stage-in = 0 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,557 | INFO     | . payload execution = 5954 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,557 | INFO     | . stage-out = 1 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,557 | INFO     | . log creation = 0 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,557 | INFO     | ..............................
[2025-10-18 20:28:54] 2025-10-19 00:28:22,650 | INFO     | 
[2025-10-18 20:28:54] 2025-10-19 00:28:22,650 | INFO     | job summary report
[2025-10-18 20:28:54] 2025-10-19 00:28:22,650 | INFO     | --------------------------------------------------
[2025-10-18 20:28:54] 2025-10-19 00:28:22,650 | INFO     | PanDA job id: 6850527359
[2025-10-18 20:28:54] 2025-10-19 00:28:22,651 | INFO     | task id: 46808902
[2025-10-18 20:28:54] 2025-10-19 00:28:22,651 | INFO     | errors: (none)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 20:28:54] 2025-10-19 00:28:22,651 | INFO     | pilot state: finished 
[2025-10-18 20:28:54] 2025-10-19 00:28:22,651 | INFO     | transexitcode: 0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,651 | INFO     | exeerrorcode: 0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,652 | INFO     | exeerrordiag: 
[2025-10-18 20:28:54] 2025-10-19 00:28:22,652 | INFO     | exitcode: 0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,652 | INFO     | exitmsg: OK
[2025-10-18 20:28:54] 2025-10-19 00:28:22,652 | INFO     | cpuconsumptiontime: 43532 s
[2025-10-18 20:28:54] 2025-10-19 00:28:22,652 | INFO     | nevents: 400
[2025-10-18 20:28:54] 2025-10-19 00:28:22,653 | INFO     | neventsw: 0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,653 | INFO     | pid: 30538
[2025-10-18 20:28:54] 2025-10-19 00:28:22,653 | INFO     | pgrp: 30538
[2025-10-18 20:28:54] 2025-10-19 00:28:22,653 | INFO     | corecount: 8
[2025-10-18 20:28:54] 2025-10-19 00:28:22,653 | INFO     | event service: False
[2025-10-18 20:28:54] 2025-10-19 00:28:22,653 | INFO     | sizes: {0: 2348849, 6: 2349111, 11: 2349139, 5966: 2375827, 5967: 2384853, 5970: 2384909, 5976: 2385231}
[2025-10-18 20:28:54] 2025-10-19 00:28:22,654 | INFO     | --------------------------------------------------
[2025-10-18 20:28:54] 2025-10-19 00:28:22,654 | INFO     | 
[2025-10-18 20:28:54] 2025-10-19 00:28:22,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 20:28:54] 2025-10-19 00:28:22,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | job 6850527359 has completed (purged errors)
[2025-10-18 20:28:54] 2025-10-19 00:28:22,719 | INFO     | overall cleanup function is called
[2025-10-18 20:28:54] 2025-10-19 00:28:23,726 | INFO     | --- collectZombieJob: --- 10, [30538]
[2025-10-18 20:28:54] 2025-10-19 00:28:23,726 | INFO     | zombie collector waiting for pid 30538
[2025-10-18 20:28:54] 2025-10-19 00:28:23,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 20:28:54] 2025-10-19 00:28:23,726 | INFO     | collected zombie processes
[2025-10-18 20:28:54] 2025-10-19 00:28:23,726 | INFO     | will attempt to kill all subprocesses of pid=30538
[2025-10-18 20:28:54] 2025-10-19 00:28:23,822 | INFO     | process IDs to be killed: [30538] (in reverse order)
[2025-10-18 20:28:54] 2025-10-19 00:28:23,884 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 20:28:54] 2025-10-19 00:28:23,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 20:28:54] 2025-10-19 00:28:23,889 | INFO     | did not find any defunct processes belonging to 30538
[2025-10-18 20:28:54] 2025-10-19 00:28:23,893 | INFO     | did not find any defunct processes belonging to 30538
[2025-10-18 20:28:54] 2025-10-19 00:28:23,893 | INFO     | ready for new job
[2025-10-18 20:28:54] 2025-10-19 00:28:23,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 20:28:54] 2025-10-19 00:28:23,895 | INFO     | ***************************************
[2025-10-18 20:28:54] 2025-10-19 00:28:23,895 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 20:28:54] 2025-10-19 00:28:23,895 | INFO     | ***************************************
[2025-10-18 20:28:54] 2025-10-19 00:28:23,895 | INFO     | 
[2025-10-18 20:28:54] 2025-10-19 00:28:23,896 | INFO     | architecture information:
[2025-10-18 20:28:54] 2025-10-19 00:28:23,897 | INFO     | executing command: cat /etc/os-release
[2025-10-18 20:28:54] 2025-10-19 00:28:23,914 | INFO     | cat /etc/os-release:
[2025-10-18 20:28:54] NAME="CentOS Linux"
[2025-10-18 20:28:54] VERSION="7 (Core)"
[2025-10-18 20:28:54] ID="centos"
[2025-10-18 20:28:54] ID_LIKE="rhel fedora"
[2025-10-18 20:28:54] VERSION_ID="7"
[2025-10-18 20:28:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 20:28:54] ANSI_COLOR="0;31"
[2025-10-18 20:28:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 20:28:54] HOME_URL="https://www.centos.org/"
[2025-10-18 20:28:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 20:28:54] 
[2025-10-18 20:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 20:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 20:28:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 20:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 20:28:54] 
[2025-10-18 20:28:54] 2025-10-19 00:28:23,914 | INFO     | ***************************************
[2025-10-18 20:28:54] 2025-10-19 00:28:24,418 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 20:28:54] 2025-10-19 00:28:24,438 | INFO     | sufficient remaining disk space (18655215616 B)
[2025-10-18 20:28:54] 2025-10-19 00:28:24,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 20:28:54] 2025-10-19 00:28:24,439 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 20:28:54] 2025-10-19 00:28:24,439 | INFO     | update_server=False
[2025-10-18 20:28:54] 2025-10-19 00:28:24,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 20:28:54] 2025-10-19 00:28:24,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:28:54] 2025-10-19 00:28:24,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:28:54] 2025-10-19 00:28:24,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 20:28:54] 2025-10-19 00:28:24,441 | INFO     | aborting loop
[2025-10-18 20:28:54] 2025-10-19 00:28:24,752 | INFO     | all job control threads have been joined
[2025-10-18 20:28:54] 2025-10-19 00:28:25,445 | INFO     | [job] retrieve thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,445 | INFO     | [job] queue monitor thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,446 | INFO     | all data control threads have been joined
[2025-10-18 20:28:54] 2025-10-19 00:28:25,447 | INFO     | [job] job monitor thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,476 | INFO     | all payload control threads have been joined
[2025-10-18 20:28:54] 2025-10-19 00:28:25,728 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,758 | INFO     | [job] control thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,758 | INFO     | [job] validate thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,759 | INFO     | [data] copytool_in thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:25,760 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:26,207 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:26,447 | INFO     | [data] copytool_out thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:26,452 | INFO     | [data] control thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:26,481 | INFO     | [payload] control thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:26,709 | INFO     | [payload] validate_post thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:27,013 | INFO     | [payload] failed_post thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:27,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 20:28:54] 2025-10-19 00:28:31,239 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:34,998 | INFO     | job.realtimelogging is not enabled
[2025-10-18 20:28:54] 2025-10-19 00:28:36,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 20:28:54] 2025-10-19 00:28:38,475 | INFO     | [monitor] cgroup control has ended
[2025-10-18 20:28:54] 2025-10-19 00:28:40,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973357418304)>', '<ExcThread(monitor, started 139972170475264)>']
[2025-10-18 20:28:54] 2025-10-19 00:28:45,506 | INFO     | all workflow threads have been joined
[2025-10-18 20:28:54] 2025-10-19 00:28:45,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 20:28:54] 2025-10-19 00:28:45,513 | INFO     | traces error code: 0
[2025-10-18 20:28:54] 2025-10-19 00:28:45,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 20:28:54] 2025-10-19 00:28:54,345 | INFO     | PID=24087 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 20:28:54] 2025-10-19 00:28:54,346 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 20:28:54] 2025-10-19 00:28:54,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 20:28:54] 2025-10-19 00:28:54,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 20:28:54] 2025-10-19 00:28:54,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 20:28:54] 2025-10-19 00:28:54,346 | INFO     | [monitor] control thread has ended
[2025-10-18 20:28:54] 2025-10-19 00:28:54,464 [wrapper] ==== pilot stdout END ====
[2025-10-18 20:28:54] 2025-10-19 00:28:54,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 20:28:54] 2025-10-19 00:28:54,473 [wrapper] pilotpid: 24087
[2025-10-18 20:28:54] 2025-10-19 00:28:54,478 [wrapper] Pilot exit status: 0
[2025-10-18 20:28:54] 2025-10-19 00:28:54,497 [wrapper] pandaids: 6850527359
[2025-10-18 20:28:54] 2025-10-19 00:28:54,549 [wrapper] cleanup supervisor_pilot 31533 24088
[2025-10-18 20:28:54] 2025-10-19 00:28:54,554 [wrapper] Test setup, not cleaning
[2025-10-18 20:28:54] 2025-10-19 00:28:54,559 [wrapper] apfmon messages muted
[2025-10-18 20:28:54] 2025-10-19 00:28:54,564 [wrapper] ==== wrapper stdout END ====
[2025-10-18 20:28:54] 2025-10-19 00:28:54,568 [wrapper] ==== wrapper stderr END ====
[2025-10-18 20:28:54]  *** Error codes and diagnostics ***
[2025-10-18 20:28:54]     "exeErrorCode": 0,
[2025-10-18 20:28:54]     "exeErrorDiag": "",
[2025-10-18 20:28:54]     "pilotErrorCode": 0,
[2025-10-18 20:28:54]     "pilotErrorDiag": "",
[2025-10-18 20:28:54]  *** Listing of results directory ***
[2025-10-18 20:28:54] total 336768
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 14:42 pilot3.tar.gz
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 14:52 queuedata.json
[2025-10-18 20:28:54] -rwx------ 1 boincer umatlas     36292 Oct 18 14:52 runpilot2-wrapper.sh
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas       100 Oct 18 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 20:28:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 18:48 run_atlas
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas       105 Oct 18 18:48 job.xml
[2025-10-18 20:28:54] -rw-r--r-- 2 boincer umatlas 189584131 Oct 18 18:48 EVNT.46808900._000151.pool.root.1
[2025-10-18 20:28:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 18:48 start_atlas.sh
[2025-10-18 20:28:54] drwxrwx--x 2 boincer umatlas      4096 Oct 18 18:48 shared
[2025-10-18 20:28:54] -rw-r--r-- 2 boincer umatlas    569674 Oct 18 18:48 input.tar.gz
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas         0 Oct 18 18:48 boinc_lockfile
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas      2503 Oct 18 18:48 pandaJob.out
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas    976750 Oct 18 18:48 agis_schedconf.cvmfs.json
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas   1560740 Oct 18 18:48 agis_ddmendpoints.agis.ALL.json
[2025-10-18 20:28:54] drwx------ 5 boincer umatlas      4096 Oct 18 18:48 pilot3
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas      5909 Oct 18 20:19 init_data.xml
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas 148964500 Oct 18 20:27 HITS.46808902._003753.pool.root.1
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas        95 Oct 18 20:27 pilot_heartbeat.json
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas       529 Oct 18 20:27 boinc_task_state.xml
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas      1050 Oct 18 20:28 memory_monitor_summary.json
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas    351909 Oct 18 20:28 log.46808902._003753.job.log.tgz.1
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas      7848 Oct 18 20:28 heartbeat.json
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 20:28 boinc_mmap_file
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas        27 Oct 18 20:28 wrapper_checkpoint.txt
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas       745 Oct 18 20:28 pilotlog.txt
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas    849954 Oct 18 20:28 log.46808902._003753.job.log.1
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas       357 Oct 18 20:28 output.list
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas       620 Oct 18 20:28 runtime_log
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas   1218560 Oct 18 20:28 result.tar.gz
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas      8703 Oct 18 20:28 runtime_log.err
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas       658 Oct 18 20:28 Qf0KDmyDRU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdFyNDmvh01Mn.diag
[2025-10-18 20:28:54] -rw-r--r-- 1 boincer umatlas     21989 Oct 18 20:28 stderr.txt
[2025-10-18 20:28:54] HITS file was successfully produced:
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas 148964500 Oct 18 20:27 shared/HITS.pool.root.1
[2025-10-18 20:28:54]  *** Contents of shared directory: ***
[2025-10-18 20:28:54] total 332392
[2025-10-18 20:28:54] -rw-r--r-- 2 boincer umatlas 189584131 Oct 18 18:48 ATLAS.root_0
[2025-10-18 20:28:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 18:48 start_atlas.sh
[2025-10-18 20:28:54] -rw-r--r-- 2 boincer umatlas    569674 Oct 18 18:48 input.tar.gz
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas 148964500 Oct 18 20:27 HITS.pool.root.1
[2025-10-18 20:28:54] -rw------- 1 boincer umatlas   1218560 Oct 18 20:28 result.tar.gz
20:28:56 (20395): run_atlas exited; CPU time 43436.823271
20:28:56 (20395): called boinc_finish(0)

</stderr_txt>
]]>

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