Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:52:39 (1908951): wrapper (7.7.26015): starting
15:52:39 (1908951): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 15:52:39] Arguments: --nthreads 4
[2025-10-19 15:52:39] Threads: 4
[2025-10-19 15:52:39] Checking for CVMFS
[2025-10-19 15:52:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 15:52:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 15:52:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 15:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 15:52:40] 2.9.2.0 194923 5149 96004 151888 3 57 30215644 36864001 0 130560 0 4426861 99.992 184856 1649 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 15:52:40] CVMFS is ok
[2025-10-19 15:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 15:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 15:52:40] Further information can be found at the LHC@home message board.
[2025-10-19 15:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 15:52:40] Checking for apptainer binary...
[2025-10-19 15:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 15:52:40] Running /usr/bin/apptainer --version
[2025-10-19 15:52:40] apptainer version 1.4.1-1.1
[2025-10-19 15:52:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 15:52:40] atlasA139
[2025-10-19 15:52:40] apptainer works
[2025-10-19 15:52:40] Set ATHENA_PROC_NUMBER=4
[2025-10-19 15:52:40] Set ATHENA_CORE_NUMBER=4
[2025-10-19 15:52:40] Starting ATLAS job with PandaID=6848005305
[2025-10-19 15:52:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 17:06:00]  *** The last 200 lines of the pilot log: ***
[2025-10-19 17:06:00]  status=None
[2025-10-19 17:06:00]  status_code=0
[2025-10-19 17:06:00]  storage_token=
[2025-10-19 17:06:00]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6848005305/log.46771637._030534.job.log.tgz.1
[2025-10-19 17:06:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/a4/log.46771637._030534.job.log.tgz.1
[2025-10-19 17:06:00]  workdir=None
[2025-10-19 17:06:00] ]
[2025-10-19 17:06:00] 2025-10-19 15:05:17,392 | INFO     | transferring file log.46771637._030534.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6848005305/log.46771637._030534.job.log.tgz.1 to /local/data/boinc/
[2025-10-19 17:06:00] 2025-10-19 15:05:17,392 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6848005305/log.46771637._030534.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0305
[2025-10-19 17:06:00] 2025-10-19 15:05:17,411 | INFO     | adding to output.list: log.46771637._030534.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/a4/log.46771637._030534.job.log.tg
[2025-10-19 17:06:00] 2025-10-19 15:05:17,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 17:06:00] 2025-10-19 15:05:17,411 | INFO     | summary of transferred files:
[2025-10-19 17:06:00] 2025-10-19 15:05:17,411 | INFO     |  -- lfn=log.46771637._030534.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 17:06:00] 2025-10-19 15:05:17,411 | INFO     | stage-out finished correctly
[2025-10-19 17:06:00] 2025-10-19 15:05:19,048 | INFO     | time since job start (4351s) is within the limit (172800.0s)
[2025-10-19 17:06:00] 2025-10-19 15:05:19,944 | WARNING  | process 1919306 can no longer be monitored (due to stat problems) - aborting
[2025-10-19 17:06:00] 2025-10-19 15:05:19,944 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848005305/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 17:06:00] 2025-10-19 15:05:19,987 | INFO     | number of running child processes to parent process 1919306: 1
[2025-10-19 17:06:00] 2025-10-19 15:05:19,987 | INFO     | maximum number of monitored processes: 6
[2025-10-19 17:06:00] 2025-10-19 15:05:20,630 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 17:06:00] 2025-10-19 15:05:20,828 | INFO     | job 6848005305 has state=finished
[2025-10-19 17:06:00] 2025-10-19 15:05:20,828 | INFO     | preparing for final server update for job 6848005305 in state='finished'
[2025-10-19 17:06:00] 2025-10-19 15:05:20,829 | INFO     | this job has now completed (state=finished)
[2025-10-19 17:06:00] 2025-10-19 15:05:20,829 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 17:06:00] 2025-10-19 15:05:20,829 | INFO     | log transfer has been attempted: DONE
[2025-10-19 17:06:00] 2025-10-19 15:05:20,829 | INFO     | job 6848005305 has finished - writing final server update
[2025-10-19 17:06:00] 2025-10-19 15:05:20,829 | INFO     | total number of processed events: 400 (read)
[2025-10-19 17:06:00] 2025-10-19 15:05:20,830 | INFO     | executing command: lscpu
[2025-10-19 17:06:00] 2025-10-19 15:05:20,852 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 17:06:00] 2025-10-19 15:05:21,054 | INFO     | time since job start (4353s) is within the limit (172800.0s)
[2025-10-19 17:06:00] 2025-10-19 15:05:22,490 | INFO     | monitor loop #334: job 0:6848005305 is in state 'finished'
[2025-10-19 17:06:00] 2025-10-19 15:05:22,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 17:06:00] 2025-10-19 15:05:23,059 | INFO     | time since job start (4355s) is within the limit (172800.0s)
[2025-10-19 17:06:00] 2025-10-19 15:05:24,993 | INFO     | monitor loop #335: job 0:6848005305 is in state 'finished'
[2025-10-19 17:06:00] 2025-10-19 15:05:24,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 17:06:00] 2025-10-19 15:05:25,066 | INFO     | time since job start (4357s) is within the limit (172800.0s)
[2025-10-19 17:06:00] 2025-10-19 15:05:25,955 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 17:06:00] 2025-10-19 15:05:25,957 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3483.8230000000003
[2025-10-19 17:06:00] 2025-10-19 15:05:25,958 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848005305/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 17:06:00] 2025-10-19 15:05:25,958 | INFO     | extracted standard info from prmon json
[2025-10-19 17:06:00] 2025-10-19 15:05:25,959 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 17:06:00] 2025-10-19 15:05:25,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 17:06:00] 2025-10-19 15:05:25,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 17:06:00] 2025-10-19 15:05:25,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 17:06:00] 2025-10-19 15:05:25,959 | INFO     | fitting pss+swap vs Time
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | sum of square deviations: 81266640.0
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | sum of deviations: -3184650241.0
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | mean x: 1760884217.5
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | mean y: 2435250.53125
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | -- intersect: 69007384238.63351
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | intersect: 69007384238.63351
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | chi2: 0.10517733291470702
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | -- intersect: 69007384238.63351
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | current memory leak: -39.19 B/s (using 64 data points, chi2=0.11)
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | could have reported an average CPU frequency of 3630 MHz (6 samples)
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | ..............................
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . Timing measurements:
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . get job = 0 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . initial setup = 1 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . payload setup = 4 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . stage-in = 0 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . payload execution = 4326 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . stage-out = 0 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | . log creation = 0 s
[2025-10-19 17:06:00] 2025-10-19 15:05:25,960 | INFO     | ..............................
[2025-10-19 17:06:00] 2025-10-19 15:05:25,999 | INFO     | 
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | job summary report
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | --------------------------------------------------
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | PanDA job id: 6848005305
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | task id: 46771637
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | errors: (none)
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | pilot state: finished 
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | transexitcode: 0
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | exeerrorcode: 0
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | exeerrordiag: 
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | exitcode: 0
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | exitmsg: OK
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | cpuconsumptiontime: 16456 s
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | nevents: 400
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | neventsw: 0
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | pid: 1919306
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | pgrp: 1919306
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | corecount: 4
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | event service: False
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | sizes: {0: 2348932, 4: 2349194, 11: 2349222, 4334: 2375441, 4335: 2384445, 4338: 2384501, 4343: 2384823}
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | --------------------------------------------------
[2025-10-19 17:06:00] 2025-10-19 15:05:26,000 | INFO     | 
[2025-10-19 17:06:00] 2025-10-19 15:05:26,001 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | job 6848005305 has completed (purged errors)
[2025-10-19 17:06:00] 2025-10-19 15:05:26,019 | INFO     | overall cleanup function is called
[2025-10-19 17:06:00] 2025-10-19 15:05:26,134 | INFO     | PID=1912751 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 17:06:00] 2025-10-19 15:05:27,025 | INFO     | --- collectZombieJob: --- 10, [1919306]
[2025-10-19 17:06:00] 2025-10-19 15:05:27,026 | INFO     | zombie collector waiting for pid 1919306
[2025-10-19 17:06:00] 2025-10-19 15:05:27,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 17:06:00] 2025-10-19 15:05:27,026 | INFO     | collected zombie processes
[2025-10-19 17:06:00] 2025-10-19 15:05:27,026 | INFO     | will attempt to kill all subprocesses of pid=1919306
[2025-10-19 17:06:00] 2025-10-19 15:05:27,073 | INFO     | process IDs to be killed: [1919306] (in reverse order)
[2025-10-19 17:06:00] 2025-10-19 15:05:27,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 17:06:00] 2025-10-19 15:05:27,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 17:06:00] 2025-10-19 15:05:27,109 | INFO     | did not find any defunct processes belonging to 1919306
[2025-10-19 17:06:00] 2025-10-19 15:05:27,110 | INFO     | did not find any defunct processes belonging to 1919306
[2025-10-19 17:06:00] 2025-10-19 15:05:27,110 | INFO     | ready for new job
[2025-10-19 17:06:00] 2025-10-19 15:05:27,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 17:06:00] 2025-10-19 15:05:27,111 | INFO     | ***************************************
[2025-10-19 17:06:00] 2025-10-19 15:05:27,111 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 17:06:00] 2025-10-19 15:05:27,111 | INFO     | ***************************************
[2025-10-19 17:06:00] 2025-10-19 15:05:27,111 | INFO     | 
[2025-10-19 17:06:00] 2025-10-19 15:05:27,111 | INFO     | architecture information:
[2025-10-19 17:06:00] 2025-10-19 15:05:27,112 | INFO     | executing command: cat /etc/os-release
[2025-10-19 17:06:00] 2025-10-19 15:05:27,125 | INFO     | cat /etc/os-release:
[2025-10-19 17:06:00] NAME="CentOS Linux"
[2025-10-19 17:06:00] VERSION="7 (Core)"
[2025-10-19 17:06:00] ID="centos"
[2025-10-19 17:06:00] ID_LIKE="rhel fedora"
[2025-10-19 17:06:00] VERSION_ID="7"
[2025-10-19 17:06:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 17:06:00] ANSI_COLOR="0;31"
[2025-10-19 17:06:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 17:06:00] HOME_URL="https://www.centos.org/"
[2025-10-19 17:06:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 17:06:00] 
[2025-10-19 17:06:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 17:06:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 17:06:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 17:06:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 17:06:00] 
[2025-10-19 17:06:00] 2025-10-19 15:05:27,125 | INFO     | ***************************************
[2025-10-19 17:06:00] 2025-10-19 15:05:27,628 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 17:06:00] 2025-10-19 15:05:27,646 | INFO     | sufficient remaining disk space (331101503488 B)
[2025-10-19 17:06:00] 2025-10-19 15:05:27,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 17:06:00] 2025-10-19 15:05:27,646 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 17:06:00] 2025-10-19 15:05:27,646 | INFO     | update_server=False
[2025-10-19 17:06:00] 2025-10-19 15:05:27,646 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 17:06:00] 2025-10-19 15:05:27,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 17:06:00] 2025-10-19 15:05:27,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 17:06:00] 2025-10-19 15:05:27,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 17:06:00] 2025-10-19 15:05:28,363 | INFO     | all data control threads have been joined
[2025-10-19 17:06:00] 2025-10-19 15:05:28,447 | INFO     | all payload control threads have been joined
[2025-10-19 17:06:00] 2025-10-19 15:05:28,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 17:06:00] 2025-10-19 15:05:28,508 | INFO     | aborting loop
[2025-10-19 17:06:00] 2025-10-19 15:05:28,652 | INFO     | [job] queue monitor thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:28,652 | INFO     | [job] retrieve thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:28,695 | INFO     | all job control threads have been joined
[2025-10-19 17:06:00] 2025-10-19 15:05:28,893 | INFO     | [payload] validate_post thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,060 | INFO     | [job] validate thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,176 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,231 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,369 | INFO     | [data] control thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,453 | INFO     | [payload] control thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,513 | INFO     | [job] job monitor thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,617 | INFO     | [data] copytool_in thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,701 | INFO     | [job] control thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,971 | INFO     | [data] copytool_out thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:29,976 | INFO     | [payload] failed_post thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:30,110 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:31,654 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 17:06:00] 2025-10-19 15:05:53,544 | INFO     | [monitor] cgroup control has ended
[2025-10-19 17:06:00] 2025-10-19 15:05:55,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710638315328)>', '<ExcThread(monitor, started 140709529102080)>']
[2025-10-19 17:06:00] 2025-10-19 15:05:58,278 | INFO     | PID=1912751 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 17:06:00] 2025-10-19 15:05:58,278 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 17:06:00] 2025-10-19 15:05:58,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 17:06:00] 2025-10-19 15:05:58,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 17:06:00] 2025-10-19 15:05:58,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 17:06:00] 2025-10-19 15:05:58,278 | INFO     | [monitor] control thread has ended
[2025-10-19 17:06:00] 2025-10-19 15:06:00,043 | INFO     | all workflow threads have been joined
[2025-10-19 17:06:00] 2025-10-19 15:06:00,044 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 17:06:00] 2025-10-19 15:06:00,044 | INFO     | traces error code: 0
[2025-10-19 17:06:00] 2025-10-19 15:06:00,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 17:06:00] 2025-10-19 15:06:00,113 [wrapper] ==== pilot stdout END ====
[2025-10-19 17:06:00] 2025-10-19 15:06:00,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 17:06:00] 2025-10-19 15:06:00,122 [wrapper] pilotpid: 1912751
[2025-10-19 17:06:00] 2025-10-19 15:06:00,126 [wrapper] Pilot exit status: 0
[2025-10-19 17:06:00] 2025-10-19 15:06:00,137 [wrapper] pandaids: 6848005305
[2025-10-19 17:06:00] 2025-10-19 15:06:00,160 [wrapper] cleanup supervisor_pilot 1929369 1912752
[2025-10-19 17:06:00] 2025-10-19 15:06:00,163 [wrapper] Test setup, not cleaning
[2025-10-19 17:06:00] 2025-10-19 15:06:00,167 [wrapper] apfmon messages muted
[2025-10-19 17:06:00] 2025-10-19 15:06:00,171 [wrapper] ==== wrapper stdout END ====
[2025-10-19 17:06:00] 2025-10-19 15:06:00,175 [wrapper] ==== wrapper stderr END ====
[2025-10-19 17:06:00]  *** Error codes and diagnostics ***
[2025-10-19 17:06:00]     "exeErrorCode": 0,
[2025-10-19 17:06:00]     "exeErrorDiag": "",
[2025-10-19 17:06:00]     "pilotErrorCode": 0,
[2025-10-19 17:06:00]     "pilotErrorDiag": "",
[2025-10-19 17:06:00]  *** Listing of results directory ***
[2025-10-19 17:06:00] total 427736
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc      5112 Oct 17 21:47 queuedata.json
[2025-10-19 17:06:00] -rwx------ 1 boinc boinc     36292 Oct 17 21:48 runpilot2-wrapper.sh
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc    557409 Oct 17 21:48 pilot3.tar.gz
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc       100 Oct 19 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 17:06:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 15:52 run_atlas
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc       105 Oct 19 15:52 job.xml
[2025-10-19 17:06:00] -rw-r--r-- 2 boinc boinc 227044578 Oct 19 15:52 EVNT.46771634._001364.pool.root.1
[2025-10-19 17:06:00] drwxrwx--x 2 boinc boinc      4096 Oct 19 15:52 shared
[2025-10-19 17:06:00] -rw-r--r-- 2 boinc boinc    569671 Oct 19 15:52 input.tar.gz
[2025-10-19 17:06:00] -rw-r--r-- 2 boinc boinc     15120 Oct 19 15:52 start_atlas.sh
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc         0 Oct 19 15:52 boinc_setup_complete
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc      6373 Oct 19 15:52 init_data.xml
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc         0 Oct 19 15:52 boinc_lockfile
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc      2558 Oct 19 15:52 pandaJob.out
[2025-10-19 17:06:00] -rw------- 1 boinc boinc    976750 Oct 19 15:52 agis_schedconf.cvmfs.json
[2025-10-19 17:06:00] -rw------- 1 boinc boinc   1560740 Oct 19 15:52 agis_ddmendpoints.agis.ALL.json
[2025-10-19 17:06:00] drwx------ 5 boinc boinc      4096 Oct 19 15:52 pilot3
[2025-10-19 17:06:00] -rw------- 1 boinc boinc 205253165 Oct 19 17:04 HITS.46771637._030534.pool.root.1
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc       529 Oct 19 17:04 boinc_task_state.xml
[2025-10-19 17:06:00] -rw------- 1 boinc boinc        95 Oct 19 17:05 pilot_heartbeat.json
[2025-10-19 17:06:00] -rw------- 1 boinc boinc      1019 Oct 19 17:05 memory_monitor_summary.json
[2025-10-19 17:06:00] -rw------- 1 boinc boinc    250896 Oct 19 17:05 log.46771637._030534.job.log.tgz.1
[2025-10-19 17:06:00] -rw------- 1 boinc boinc      7761 Oct 19 17:05 heartbeat.json
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc      8192 Oct 19 17:05 boinc_mmap_file
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc        27 Oct 19 17:05 wrapper_checkpoint.txt
[2025-10-19 17:06:00] -rw------- 1 boinc boinc      4752 Oct 19 17:06 pilotlog.txt
[2025-10-19 17:06:00] -rw------- 1 boinc boinc    646781 Oct 19 17:06 log.46771637._030534.job.log.1
[2025-10-19 17:06:00] -rw------- 1 boinc boinc       357 Oct 19 17:06 output.list
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc       620 Oct 19 17:06 runtime_log
[2025-10-19 17:06:00] -rw------- 1 boinc boinc    921600 Oct 19 17:06 result.tar.gz
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc      8792 Oct 19 17:06 runtime_log.err
[2025-10-19 17:06:00] -rw------- 1 boinc boinc       661 Oct 19 17:06 kFSLDmxb5T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmihuNDmEgvzSm.diag
[2025-10-19 17:06:00] -rw-r--r-- 1 boinc boinc     22136 Oct 19 17:06 stderr.txt
[2025-10-19 17:06:00] HITS file was successfully produced:
[2025-10-19 17:06:00] -rw------- 1 boinc boinc 205253165 Oct 19 17:04 shared/HITS.pool.root.1
[2025-10-19 17:06:00]  *** Contents of shared directory: ***
[2025-10-19 17:06:00] total 423652
[2025-10-19 17:06:00] -rw-r--r-- 2 boinc boinc 227044578 Oct 19 15:52 ATLAS.root_0
[2025-10-19 17:06:00] -rw-r--r-- 2 boinc boinc    569671 Oct 19 15:52 input.tar.gz
[2025-10-19 17:06:00] -rw-r--r-- 2 boinc boinc     15120 Oct 19 15:52 start_atlas.sh
[2025-10-19 17:06:00] -rw------- 1 boinc boinc 205253165 Oct 19 17:04 HITS.pool.root.1
[2025-10-19 17:06:00] -rw------- 1 boinc boinc    921600 Oct 19 17:06 result.tar.gz
17:06:01 (1908951): run_atlas exited; CPU time 16469.606056
17:06:01 (1908951): called boinc_finish(0)

</stderr_txt>
]]>

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