Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:24:25 (25138): wrapper (7.7.26015): starting
18:24:25 (25138): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 18:24:25] Arguments: --nthreads 8
[2025-10-18 18:24:25] Threads: 8
[2025-10-18 18:24:25] Checking for CVMFS
[2025-10-18 18:24:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 18:24:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 18:24:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 18:24:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 18:24:25] 2.11.2.0 2876 10154 80196 151867 1 56 19491410 20275200 1 130560 0 5663955 99.969 657250 39429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 18:24:25] CVMFS is ok
[2025-10-18 18:24:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 18:24:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 18:24:25] Further information can be found at the LHC@home message board.
[2025-10-18 18:24:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 18:24:25] Checking for apptainer binary...
[2025-10-18 18:24:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 18:24:25] Running /usr/bin/apptainer --version
[2025-10-18 18:24:25] apptainer version 1.3.2-1.el7
[2025-10-18 18:24:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 18:24:27] c-204-40.aglt2.org
[2025-10-18 18:24:27] apptainer works
[2025-10-18 18:24:27] Set ATHENA_PROC_NUMBER=8
[2025-10-18 18:24:27] Set ATHENA_CORE_NUMBER=8
[2025-10-18 18:24:27] Starting ATLAS job with PandaID=6848042240
[2025-10-18 18:24:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 20:43:04]  *** The last 200 lines of the pilot log: ***
[2025-10-18 20:43:04] 2025-10-19 00:42:16,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 20:43:04] 2025-10-19 00:42:16,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 20:43:04] 2025-10-19 00:42:16,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 20:43:04] 2025-10-19 00:42:16,397 | INFO     | fitting pss+swap vs Time
[2025-10-18 20:43:04] 2025-10-19 00:42:16,397 | INFO     | sum of square deviations: 762879420.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,398 | INFO     | sum of deviations: -5305636589.000002
[2025-10-18 20:43:04] 2025-10-19 00:42:16,398 | INFO     | mean x: 1760830402.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,398 | INFO     | mean y: 2553028.6740740743
[2025-10-18 20:43:04] 2025-10-19 00:42:16,398 | INFO     | -- intersect: 12248690442.991507
[2025-10-18 20:43:04] 2025-10-19 00:42:16,399 | INFO     | intersect: 12248690442.991507
[2025-10-18 20:43:04] 2025-10-19 00:42:16,399 | INFO     | chi2: 1.6519767876050444
[2025-10-18 20:43:04] 2025-10-19 00:42:16,399 | INFO     | sum of square deviations: 681212772.5
[2025-10-18 20:43:04] 2025-10-19 00:42:16,400 | INFO     | sum of deviations: -4530214898.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,400 | INFO     | mean x: 1760830249.5
[2025-10-18 20:43:04] 2025-10-19 00:42:16,400 | INFO     | mean y: 2554477.5692307693
[2025-10-18 20:43:04] 2025-10-19 00:42:16,400 | INFO     | -- intersect: 11712463262.542809
[2025-10-18 20:43:04] 2025-10-19 00:42:16,400 | INFO     | intersect: 11712463262.542809
[2025-10-18 20:43:04] 2025-10-19 00:42:16,401 | INFO     | chi2: 1.6527954583683389
[2025-10-18 20:43:04] 2025-10-19 00:42:16,401 | INFO     | current chi2=1.6527954583683389 (change=-0.049557037934008626 %)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,401 | INFO     | right removable region: 129
[2025-10-18 20:43:04] 2025-10-19 00:42:16,401 | INFO     | sum of square deviations: 681212772.5
[2025-10-18 20:43:04] 2025-10-19 00:42:16,402 | INFO     | sum of deviations: -25866307691.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,402 | INFO     | mean x: 1760830554.5
[2025-10-18 20:43:04] 2025-10-19 00:42:16,402 | INFO     | mean y: 2590779.184615385
[2025-10-18 20:43:04] 2025-10-19 00:42:16,402 | INFO     | -- intersect: 66863029621.60392
[2025-10-18 20:43:04] 2025-10-19 00:42:16,403 | INFO     | intersect: 66863029621.60392
[2025-10-18 20:43:04] 2025-10-19 00:42:16,403 | INFO     | chi2: 0.16686504369440325
[2025-10-18 20:43:04] 2025-10-19 00:42:16,403 | INFO     | current chi2=0.16686504369440325 (change=89.8990685010583 %)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,403 | INFO     | sum of square deviations: 605592750.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,404 | INFO     | sum of deviations: -27062564112.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,404 | INFO     | mean x: 1760830707.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,404 | INFO     | mean y: 2593087.584
[2025-10-18 20:43:04] 2025-10-19 00:42:16,404 | INFO     | -- intersect: 78690116837.77055
[2025-10-18 20:43:04] 2025-10-19 00:42:16,404 | INFO     | intersect: 78690116837.77055
[2025-10-18 20:43:04] 2025-10-19 00:42:16,405 | INFO     | chi2: 0.12176737351315879
[2025-10-18 20:43:04] 2025-10-19 00:42:16,405 | INFO     | current chi2=0.12176737351315879 (change=27.02643356737817 %)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,405 | INFO     | sum of square deviations: 535786790.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,406 | INFO     | sum of deviations: -24101293919.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,406 | INFO     | mean x: 1760830859.5
[2025-10-18 20:43:04] 2025-10-19 00:42:16,406 | INFO     | mean y: 2586603.183333333
[2025-10-18 20:43:04] 2025-10-19 00:42:16,406 | INFO     | -- intersect: 79210030456.83806
[2025-10-18 20:43:04] 2025-10-19 00:42:16,406 | INFO     | intersect: 79210030456.83806
[2025-10-18 20:43:04] 2025-10-19 00:42:16,406 | INFO     | chi2: 0.12156786335059326
[2025-10-18 20:43:04] 2025-10-19 00:42:16,407 | INFO     | current chi2=0.12156786335059326 (change=0.16384533624187136 %)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,407 | INFO     | left removable region: 30
[2025-10-18 20:43:04] 2025-10-19 00:42:16,407 | INFO     | sum of square deviations: 300842850.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,407 | INFO     | sum of deviations: -12468307341.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,407 | INFO     | mean x: 1760831134.0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,408 | INFO     | mean y: 2561036.303030303
[2025-10-18 20:43:04] 2025-10-19 00:42:16,408 | INFO     | -- intersect: 72979478235.14473
[2025-10-18 20:43:04] 2025-10-19 00:42:16,408 | INFO     | intersect: 72979478235.14473
[2025-10-18 20:43:04] 2025-10-19 00:42:16,408 | INFO     | chi2: 0.1055909059565084
[2025-10-18 20:43:04] 2025-10-19 00:42:16,408 | INFO     | -- intersect: 72979478235.14473
[2025-10-18 20:43:04] 2025-10-19 00:42:16,409 | INFO     | current memory leak: -41.44 B/s (using 99 data points, chi2=0.11)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,409 | INFO     | could have reported an average CPU frequency of 2001 MHz (8 samples)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,409 | INFO     | ..............................
[2025-10-18 20:43:04] 2025-10-19 00:42:16,409 | INFO     | . Timing measurements:
[2025-10-18 20:43:04] 2025-10-19 00:42:16,409 | INFO     | . get job = 0 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | . initial setup = 2 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | . payload setup = 7 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | . stage-in = 0 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | . payload execution = 8212 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | . stage-out = 0 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | . log creation = 0 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,410 | INFO     | ..............................
[2025-10-18 20:43:04] 2025-10-19 00:42:16,501 | INFO     | 
[2025-10-18 20:43:04] 2025-10-19 00:42:16,501 | INFO     | job summary report
[2025-10-18 20:43:04] 2025-10-19 00:42:16,501 | INFO     | --------------------------------------------------
[2025-10-18 20:43:04] 2025-10-19 00:42:16,501 | INFO     | PanDA job id: 6848042240
[2025-10-18 20:43:04] 2025-10-19 00:42:16,501 | INFO     | task id: 46771637
[2025-10-18 20:43:04] 2025-10-19 00:42:16,501 | INFO     | errors: (none)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | pilot state: finished 
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | transexitcode: 0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | exeerrorcode: 0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | exeerrordiag: 
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | exitcode: 0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | exitmsg: OK
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | cpuconsumptiontime: 60905 s
[2025-10-18 20:43:04] 2025-10-19 00:42:16,502 | INFO     | nevents: 400
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | neventsw: 0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | pid: 3077
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | pgrp: 3077
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | corecount: 8
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | event service: False
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | sizes: {0: 2348752, 1: 2348951, 6: 2349213, 12: 2349241, 8224: 2377007, 8225: 2386005, 8226: 2386189, 8235: 2386383}
[2025-10-18 20:43:04] 2025-10-19 00:42:16,503 | INFO     | --------------------------------------------------
[2025-10-18 20:43:04] 2025-10-19 00:42:16,504 | INFO     | 
[2025-10-18 20:43:04] 2025-10-19 00:42:16,504 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 20:43:04] 2025-10-19 00:42:16,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 20:43:04] 2025-10-19 00:42:16,534 | INFO     | job 6848042240 has completed (purged errors)
[2025-10-18 20:43:04] 2025-10-19 00:42:16,535 | INFO     | overall cleanup function is called
[2025-10-18 20:43:04] 2025-10-19 00:42:17,542 | INFO     | --- collectZombieJob: --- 10, [3077]
[2025-10-18 20:43:04] 2025-10-19 00:42:17,543 | INFO     | zombie collector waiting for pid 3077
[2025-10-18 20:43:04] 2025-10-19 00:42:17,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 20:43:04] 2025-10-19 00:42:17,543 | INFO     | collected zombie processes
[2025-10-18 20:43:04] 2025-10-19 00:42:17,543 | INFO     | will attempt to kill all subprocesses of pid=3077
[2025-10-18 20:43:04] 2025-10-19 00:42:17,636 | INFO     | process IDs to be killed: [3077] (in reverse order)
[2025-10-18 20:43:04] 2025-10-19 00:42:17,697 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 20:43:04] 2025-10-19 00:42:17,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 20:43:04] 2025-10-19 00:42:17,702 | INFO     | did not find any defunct processes belonging to 3077
[2025-10-18 20:43:04] 2025-10-19 00:42:17,705 | INFO     | did not find any defunct processes belonging to 3077
[2025-10-18 20:43:04] 2025-10-19 00:42:17,705 | INFO     | ready for new job
[2025-10-18 20:43:04] 2025-10-19 00:42:17,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 20:43:04] 2025-10-19 00:42:17,707 | INFO     | ***************************************
[2025-10-18 20:43:04] 2025-10-19 00:42:17,707 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 20:43:04] 2025-10-19 00:42:17,707 | INFO     | ***************************************
[2025-10-18 20:43:04] 2025-10-19 00:42:17,708 | INFO     | 
[2025-10-18 20:43:04] 2025-10-19 00:42:17,708 | INFO     | architecture information:
[2025-10-18 20:43:04] 2025-10-19 00:42:17,709 | INFO     | executing command: cat /etc/os-release
[2025-10-18 20:43:04] 2025-10-19 00:42:17,726 | INFO     | cat /etc/os-release:
[2025-10-18 20:43:04] NAME="CentOS Linux"
[2025-10-18 20:43:04] VERSION="7 (Core)"
[2025-10-18 20:43:04] ID="centos"
[2025-10-18 20:43:04] ID_LIKE="rhel fedora"
[2025-10-18 20:43:04] VERSION_ID="7"
[2025-10-18 20:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 20:43:04] ANSI_COLOR="0;31"
[2025-10-18 20:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 20:43:04] HOME_URL="https://www.centos.org/"
[2025-10-18 20:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 20:43:04] 
[2025-10-18 20:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 20:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 20:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 20:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 20:43:04] 
[2025-10-18 20:43:04] 2025-10-19 00:42:17,727 | INFO     | ***************************************
[2025-10-18 20:43:04] 2025-10-19 00:42:18,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 20:43:04] 2025-10-19 00:42:18,247 | INFO     | sufficient remaining disk space (18524143616 B)
[2025-10-18 20:43:04] 2025-10-19 00:42:18,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 20:43:04] 2025-10-19 00:42:18,248 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 20:43:04] 2025-10-19 00:42:18,248 | INFO     | update_server=False
[2025-10-18 20:43:04] 2025-10-19 00:42:18,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 20:43:04] 2025-10-19 00:42:18,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 20:43:04] 2025-10-19 00:42:18,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:43:04] 2025-10-19 00:42:18,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 20:43:04] 2025-10-19 00:42:18,719 | INFO     | all job control threads have been joined
[2025-10-18 20:43:04] 2025-10-19 00:42:18,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:43:04] 2025-10-19 00:42:18,742 | INFO     | aborting loop
[2025-10-18 20:43:04] 2025-10-19 00:42:18,907 | INFO     | all payload control threads have been joined
[2025-10-18 20:43:04] 2025-10-19 00:42:19,254 | INFO     | [job] retrieve thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,255 | INFO     | [job] queue monitor thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,266 | INFO     | all data control threads have been joined
[2025-10-18 20:43:04] 2025-10-19 00:42:19,372 | INFO     | [job] validate thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,435 | INFO     | [payload] validate_post thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,664 | INFO     | [payload] failed_post thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,695 | INFO     | [data] copytool_in thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,725 | INFO     | [job] control thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,743 | INFO     | [job] job monitor thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,889 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,905 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:19,913 | INFO     | [payload] control thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:20,016 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:20,255 | INFO     | [data] copytool_out thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:20,271 | INFO     | [data] control thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:22,579 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:28,755 | INFO     | job.realtimelogging is not enabled
[2025-10-18 20:43:04] 2025-10-19 00:42:29,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 20:43:04] 2025-10-19 00:42:49,342 | INFO     | PID=28890 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 20:43:04] 2025-10-19 00:42:49,343 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 20:43:04] 2025-10-19 00:42:49,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 20:43:04] 2025-10-19 00:42:49,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 20:43:04] 2025-10-19 00:42:57,590 | INFO     | [monitor] cgroup control has ended
[2025-10-18 20:43:04] 2025-10-19 00:42:59,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102366951232)>', '<ExcThread(monitor, started 140101606688512)>']
[2025-10-18 20:43:04] 2025-10-19 00:42:59,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 20:43:04] 2025-10-19 00:42:59,391 | INFO     | [monitor] control thread has ended
[2025-10-18 20:43:04] 2025-10-19 00:43:04,160 | INFO     | all workflow threads have been joined
[2025-10-18 20:43:04] 2025-10-19 00:43:04,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 20:43:04] 2025-10-19 00:43:04,161 | INFO     | traces error code: 0
[2025-10-18 20:43:04] 2025-10-19 00:43:04,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 20:43:04] 2025-10-19 00:43:04,262 [wrapper] ==== pilot stdout END ====
[2025-10-18 20:43:04] 2025-10-19 00:43:04,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 20:43:04] 2025-10-19 00:43:04,271 [wrapper] pilotpid: 28890
[2025-10-18 20:43:04] 2025-10-19 00:43:04,275 [wrapper] Pilot exit status: 0
[2025-10-18 20:43:04] 2025-10-19 00:43:04,296 [wrapper] pandaids: 6848042240
[2025-10-18 20:43:04] 2025-10-19 00:43:04,347 [wrapper] cleanup supervisor_pilot 29795 28891
[2025-10-18 20:43:04] 2025-10-19 00:43:04,352 [wrapper] Test setup, not cleaning
[2025-10-18 20:43:04] 2025-10-19 00:43:04,357 [wrapper] apfmon messages muted
[2025-10-18 20:43:04] 2025-10-19 00:43:04,362 [wrapper] ==== wrapper stdout END ====
[2025-10-18 20:43:04] 2025-10-19 00:43:04,367 [wrapper] ==== wrapper stderr END ====
[2025-10-18 20:43:04]  *** Error codes and diagnostics ***
[2025-10-18 20:43:04]     "exeErrorCode": 0,
[2025-10-18 20:43:04]     "exeErrorDiag": "",
[2025-10-18 20:43:04]     "pilotErrorCode": 0,
[2025-10-18 20:43:04]     "pilotErrorDiag": "",
[2025-10-18 20:43:04]  *** Listing of results directory ***
[2025-10-18 20:43:04] total 430912
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 14:42 pilot3.tar.gz
[2025-10-18 20:43:04] -rwx------ 1 boincer umatlas     36292 Oct 18 14:44 runpilot2-wrapper.sh
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 14:44 queuedata.json
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas       100 Oct 18 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 20:43:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 18:24 run_atlas
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas       105 Oct 18 18:24 job.xml
[2025-10-18 20:43:04] -rw-r--r-- 2 boincer umatlas 230030021 Oct 18 18:24 EVNT.46771634._001962.pool.root.1
[2025-10-18 20:43:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 18:24 start_atlas.sh
[2025-10-18 20:43:04] drwxrwx--x 2 boincer umatlas      4096 Oct 18 18:24 shared
[2025-10-18 20:43:04] -rw-r--r-- 2 boincer umatlas    569674 Oct 18 18:24 input.tar.gz
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas         0 Oct 18 18:24 boinc_lockfile
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas      2555 Oct 18 18:24 pandaJob.out
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas    976750 Oct 18 18:24 agis_schedconf.cvmfs.json
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas   1560740 Oct 18 18:24 agis_ddmendpoints.agis.ALL.json
[2025-10-18 20:43:04] drwx------ 5 boincer umatlas      4096 Oct 18 18:24 pilot3
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas      5909 Oct 18 20:37 init_data.xml
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas 204291632 Oct 18 20:41 HITS.46771637._046541.pool.root.1
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas      1049 Oct 18 20:42 memory_monitor_summary.json
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas    361386 Oct 18 20:42 log.46771637._046541.job.log.tgz.1
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas       529 Oct 18 20:42 boinc_task_state.xml
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas      7843 Oct 18 20:42 heartbeat.json
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 20:42 boinc_mmap_file
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas        27 Oct 18 20:42 wrapper_checkpoint.txt
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas        95 Oct 18 20:42 pilot_heartbeat.json
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas      4818 Oct 18 20:43 pilotlog.txt
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas   1154204 Oct 18 20:43 log.46771637._046541.job.log.1
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas       357 Oct 18 20:43 output.list
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas       620 Oct 18 20:43 runtime_log
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas   1536000 Oct 18 20:43 result.tar.gz
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas      8703 Oct 18 20:43 runtime_log.err
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas       660 Oct 18 20:43 36xKDmp5QU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJCyNDmRlseYn.diag
[2025-10-18 20:43:04] -rw-r--r-- 1 boincer umatlas     20830 Oct 18 20:43 stderr.txt
[2025-10-18 20:43:04] HITS file was successfully produced:
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas 204291632 Oct 18 20:41 shared/HITS.pool.root.1
[2025-10-18 20:43:04]  *** Contents of shared directory: ***
[2025-10-18 20:43:04] total 426224
[2025-10-18 20:43:04] -rw-r--r-- 2 boincer umatlas 230030021 Oct 18 18:24 ATLAS.root_0
[2025-10-18 20:43:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 18:24 start_atlas.sh
[2025-10-18 20:43:04] -rw-r--r-- 2 boincer umatlas    569674 Oct 18 18:24 input.tar.gz
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas 204291632 Oct 18 20:41 HITS.pool.root.1
[2025-10-18 20:43:04] -rw------- 1 boincer umatlas   1536000 Oct 18 20:43 result.tar.gz
20:43:06 (25138): run_atlas exited; CPU time 60857.770459
20:43:06 (25138): called boinc_finish(0)

</stderr_txt>
]]>

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