Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:00:18 (15223): wrapper (7.7.26015): starting
18:00:18 (15223): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 18:00:18] Arguments: --nthreads 12
[2025-10-18 18:00:18] Threads: 12
[2025-10-18 18:00:18] Checking for CVMFS
[2025-10-18 18:00:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 18:00:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 18:00:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 18:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 18:00:18] 2.11.2.0 2916 232047 99804 151865 3 57 13778960 20275200 1 130560 1 114356581 99.984 13731258 12714 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 18:00:18] CVMFS is ok
[2025-10-18 18:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 18:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 18:00:18] Further information can be found at the LHC@home message board.
[2025-10-18 18:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 18:00:18] Checking for apptainer binary...
[2025-10-18 18:00:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 18:00:18] Running /usr/bin/apptainer --version
[2025-10-18 18:00:18] apptainer version 1.3.2-1.el7
[2025-10-18 18:00:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 18:00:20] c-205-23.aglt2.org
[2025-10-18 18:00:20] apptainer works
[2025-10-18 18:00:20] Set ATHENA_PROC_NUMBER=12
[2025-10-18 18:00:20] Set ATHENA_CORE_NUMBER=12
[2025-10-18 18:00:20] Starting ATLAS job with PandaID=6848041303
[2025-10-18 18:00:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 19:21:04]  *** The last 200 lines of the pilot log: ***
[2025-10-18 19:21:04]  protocol_id=None
[2025-10-18 19:21:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 19:21:04]  replicas=None
[2025-10-18 19:21:04]  scope=mc23_13p6TeV
[2025-10-18 19:21:04]  status=None
[2025-10-18 19:21:04]  status_code=0
[2025-10-18 19:21:04]  storage_token=
[2025-10-18 19:21:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6848041303/log.46771637._045880.job.log.tgz.1
[2025-10-18 19:21:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/0e/log.46771637._045880.job.log.tgz.1
[2025-10-18 19:21:04]  workdir=None
[2025-10-18 19:21:04] ]
[2025-10-18 19:21:04] 2025-10-18 23:20:27,581 | INFO     | transferring file log.46771637._045880.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848041303/log.46771637._045880.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 19:21:04] 2025-10-18 23:20:27,582 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848041303/log.46771637._045880.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._045880.job
[2025-10-18 19:21:04] 2025-10-18 23:20:27,604 | INFO     | adding to output.list: log.46771637._045880.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/0e/log.46771637._045880.job.log.tg
[2025-10-18 19:21:04] 2025-10-18 23:20:27,605 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 19:21:04] 2025-10-18 23:20:27,605 | INFO     | summary of transferred files:
[2025-10-18 19:21:04] 2025-10-18 23:20:27,605 | INFO     |  -- lfn=log.46771637._045880.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 19:21:04] 2025-10-18 23:20:27,606 | INFO     | stage-out finished correctly
[2025-10-18 19:21:04] 2025-10-18 23:20:27,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 19:21:04] 2025-10-18 23:20:27,775 | INFO     | job 6848041303 has state=finished
[2025-10-18 19:21:04] 2025-10-18 23:20:27,776 | INFO     | preparing for final server update for job 6848041303 in state='finished'
[2025-10-18 19:21:04] 2025-10-18 23:20:27,776 | INFO     | this job has now completed (state=finished)
[2025-10-18 19:21:04] 2025-10-18 23:20:27,776 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 19:21:04] 2025-10-18 23:20:27,776 | INFO     | log transfer has been attempted: DONE
[2025-10-18 19:21:04] 2025-10-18 23:20:27,777 | INFO     | job 6848041303 has finished - writing final server update
[2025-10-18 19:21:04] 2025-10-18 23:20:27,777 | INFO     | total number of processed events: 400 (read)
[2025-10-18 19:21:04] 2025-10-18 23:20:27,778 | INFO     | executing command: lscpu
[2025-10-18 19:21:04] 2025-10-18 23:20:27,804 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 19:21:04] 2025-10-18 23:20:28,493 | INFO     | time since job start (4793s) is within the limit (172800.0s)
[2025-10-18 19:21:04] 2025-10-18 23:20:29,614 | INFO     | PID=18916 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 19:21:04] 2025-10-18 23:20:30,615 | INFO     | time since job start (4795s) is within the limit (172800.0s)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,369 | WARNING  | process 25278 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 19:21:04] 2025-10-18 23:20:32,369 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848041303/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,465 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 19:21:04] 2025-10-18 23:20:32,473 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5833333333333
[2025-10-18 19:21:04] 2025-10-18 23:20:32,476 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848041303/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,477 | INFO     | extracted standard info from prmon json
[2025-10-18 19:21:04] 2025-10-18 23:20:32,477 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 19:21:04] 2025-10-18 23:20:32,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 19:21:04] 2025-10-18 23:20:32,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 19:21:04] 2025-10-18 23:20:32,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 19:21:04] 2025-10-18 23:20:32,480 | INFO     | fitting pss+swap vs Time
[2025-10-18 19:21:04] 2025-10-18 23:20:32,481 | INFO     | sum of square deviations: 115715658.0
[2025-10-18 19:21:04] 2025-10-18 23:20:32,481 | INFO     | sum of deviations: 3735346254.5000005
[2025-10-18 19:21:04] 2025-10-18 23:20:32,481 | INFO     | mean x: 1760827335.5
[2025-10-18 19:21:04] 2025-10-18 23:20:32,481 | INFO     | mean y: 2667073.9583333335
[2025-10-18 19:21:04] 2025-10-18 23:20:32,482 | INFO     | -- intersect: -56837521247.67001
[2025-10-18 19:21:04] 2025-10-18 23:20:32,482 | INFO     | intersect: -56837521247.67001
[2025-10-18 19:21:04] 2025-10-18 23:20:32,482 | INFO     | chi2: 0.08884385587912454
[2025-10-18 19:21:04] 2025-10-18 23:20:32,482 | INFO     | -- intersect: -56837521247.67001
[2025-10-18 19:21:04] 2025-10-18 23:20:32,483 | INFO     | current memory leak: 32.28 B/s (using 72 data points, chi2=0.09)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,483 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,483 | INFO     | ..............................
[2025-10-18 19:21:04] 2025-10-18 23:20:32,483 | INFO     | . Timing measurements:
[2025-10-18 19:21:04] 2025-10-18 23:20:32,484 | INFO     | . get job = 0 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,484 | INFO     | . initial setup = 2 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,484 | INFO     | . payload setup = 7 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,484 | INFO     | . stage-in = 0 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,485 | INFO     | . payload execution = 4763 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,485 | INFO     | . stage-out = 0 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,485 | INFO     | . log creation = 0 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,485 | INFO     | ..............................
[2025-10-18 19:21:04] 2025-10-18 23:20:32,575 | INFO     | 
[2025-10-18 19:21:04] 2025-10-18 23:20:32,575 | INFO     | job summary report
[2025-10-18 19:21:04] 2025-10-18 23:20:32,575 | INFO     | --------------------------------------------------
[2025-10-18 19:21:04] 2025-10-18 23:20:32,575 | INFO     | PanDA job id: 6848041303
[2025-10-18 19:21:04] 2025-10-18 23:20:32,576 | INFO     | task id: 46771637
[2025-10-18 19:21:04] 2025-10-18 23:20:32,576 | INFO     | errors: (none)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 19:21:04] 2025-10-18 23:20:32,576 | INFO     | pilot state: finished 
[2025-10-18 19:21:04] 2025-10-18 23:20:32,577 | INFO     | transexitcode: 0
[2025-10-18 19:21:04] 2025-10-18 23:20:32,578 | INFO     | exeerrorcode: 0
[2025-10-18 19:21:04] 2025-10-18 23:20:32,578 | INFO     | exeerrordiag: 
[2025-10-18 19:21:04] 2025-10-18 23:20:32,578 | INFO     | exitcode: 0
[2025-10-18 19:21:04] 2025-10-18 23:20:32,578 | INFO     | exitmsg: OK
[2025-10-18 19:21:04] 2025-10-18 23:20:32,578 | INFO     | cpuconsumptiontime: 50553 s
[2025-10-18 19:21:04] 2025-10-18 23:20:32,579 | INFO     | nevents: 400
[2025-10-18 19:21:04] 2025-10-18 23:20:32,579 | INFO     | neventsw: 0
[2025-10-18 19:21:04] 2025-10-18 23:20:32,579 | INFO     | pid: 25278
[2025-10-18 19:21:04] 2025-10-18 23:20:32,580 | INFO     | pgrp: 25278
[2025-10-18 19:21:04] 2025-10-18 23:20:32,580 | INFO     | corecount: 12
[2025-10-18 19:21:04] 2025-10-18 23:20:32,580 | INFO     | event service: False
[2025-10-18 19:21:04] 2025-10-18 23:20:32,581 | INFO     | sizes: {0: 2348928, 5: 2349190, 11: 2349246, 4774: 2375436, 4775: 2375435, 4776: 2384673, 4781: 2384811}
[2025-10-18 19:21:04] 2025-10-18 23:20:32,581 | INFO     | --------------------------------------------------
[2025-10-18 19:21:04] 2025-10-18 23:20:32,581 | INFO     | 
[2025-10-18 19:21:04] 2025-10-18 23:20:32,581 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 19:21:04] 2025-10-18 23:20:32,588 | INFO     | number of running child processes to parent process 25278: 1
[2025-10-18 19:21:04] 2025-10-18 23:20:32,589 | INFO     | maximum number of monitored processes: 6
[2025-10-18 19:21:04] 2025-10-18 23:20:32,589 | INFO     | aborting job monitoring since job object (job id=6848041303) has expired
[2025-10-18 19:21:04] 2025-10-18 23:20:32,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 19:21:04] 2025-10-18 23:20:32,608 | INFO     | job 6848041303 has completed (purged errors)
[2025-10-18 19:21:04] 2025-10-18 23:20:32,608 | INFO     | overall cleanup function is called
[2025-10-18 19:21:04] 2025-10-18 23:20:33,616 | INFO     | --- collectZombieJob: --- 10, [25278]
[2025-10-18 19:21:04] 2025-10-18 23:20:33,617 | INFO     | zombie collector waiting for pid 25278
[2025-10-18 19:21:04] 2025-10-18 23:20:33,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 19:21:04] 2025-10-18 23:20:33,617 | INFO     | collected zombie processes
[2025-10-18 19:21:04] 2025-10-18 23:20:33,617 | INFO     | will attempt to kill all subprocesses of pid=25278
[2025-10-18 19:21:04] 2025-10-18 23:20:33,713 | INFO     | process IDs to be killed: [25278] (in reverse order)
[2025-10-18 19:21:04] 2025-10-18 23:20:33,767 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 19:21:04] 2025-10-18 23:20:33,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 19:21:04] 2025-10-18 23:20:33,770 | INFO     | did not find any defunct processes belonging to 25278
[2025-10-18 19:21:04] 2025-10-18 23:20:33,773 | INFO     | did not find any defunct processes belonging to 25278
[2025-10-18 19:21:04] 2025-10-18 23:20:33,773 | INFO     | ready for new job
[2025-10-18 19:21:04] 2025-10-18 23:20:33,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 19:21:04] 2025-10-18 23:20:33,775 | INFO     | ***************************************
[2025-10-18 19:21:04] 2025-10-18 23:20:33,775 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 19:21:04] 2025-10-18 23:20:33,775 | INFO     | ***************************************
[2025-10-18 19:21:04] 2025-10-18 23:20:33,775 | INFO     | 
[2025-10-18 19:21:04] 2025-10-18 23:20:33,776 | INFO     | architecture information:
[2025-10-18 19:21:04] 2025-10-18 23:20:33,777 | INFO     | executing command: cat /etc/os-release
[2025-10-18 19:21:04] 2025-10-18 23:20:33,793 | INFO     | cat /etc/os-release:
[2025-10-18 19:21:04] NAME="CentOS Linux"
[2025-10-18 19:21:04] VERSION="7 (Core)"
[2025-10-18 19:21:04] ID="centos"
[2025-10-18 19:21:04] ID_LIKE="rhel fedora"
[2025-10-18 19:21:04] VERSION_ID="7"
[2025-10-18 19:21:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 19:21:04] ANSI_COLOR="0;31"
[2025-10-18 19:21:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 19:21:04] HOME_URL="https://www.centos.org/"
[2025-10-18 19:21:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 19:21:04] 
[2025-10-18 19:21:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 19:21:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 19:21:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 19:21:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 19:21:04] 
[2025-10-18 19:21:04] 2025-10-18 23:20:33,793 | INFO     | ***************************************
[2025-10-18 19:21:04] 2025-10-18 23:20:34,296 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 19:21:04] 2025-10-18 23:20:34,357 | INFO     | sufficient remaining disk space (29337059328 B)
[2025-10-18 19:21:04] 2025-10-18 23:20:34,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 19:21:04] 2025-10-18 23:20:34,357 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 19:21:04] 2025-10-18 23:20:34,357 | INFO     | update_server=False
[2025-10-18 19:21:04] 2025-10-18 23:20:34,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 19:21:04] 2025-10-18 23:20:34,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 19:21:04] 2025-10-18 23:20:34,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 19:21:04] 2025-10-18 23:20:34,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 19:21:04] 2025-10-18 23:20:34,359 | INFO     | aborting loop
[2025-10-18 19:21:04] 2025-10-18 23:20:34,513 | INFO     | all payload control threads have been joined
[2025-10-18 19:21:04] 2025-10-18 23:20:35,225 | INFO     | all data control threads have been joined
[2025-10-18 19:21:04] 2025-10-18 23:20:35,360 | INFO     | [job] queue monitor thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:35,363 | INFO     | [job] retrieve thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:35,364 | INFO     | [job] job monitor thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:35,480 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:35,515 | INFO     | [payload] control thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:35,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 19:21:04] 2025-10-18 23:20:35,737 | INFO     | [payload] validate_post thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:35,783 | INFO     | all job control threads have been joined
[2025-10-18 19:21:04] 2025-10-18 23:20:35,938 | INFO     | [data] copytool_in thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:36,229 | INFO     | [data] control thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:36,336 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:36,384 | INFO     | [job] validate thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:36,680 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:36,789 | INFO     | [job] control thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:36,817 | INFO     | [payload] failed_post thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:37,707 | INFO     | [data] copytool_out thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:38,363 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:42,689 | INFO     | [monitor] cgroup control has ended
[2025-10-18 19:21:04] 2025-10-18 23:20:44,483 | INFO     | job.realtimelogging is not enabled
[2025-10-18 19:21:04] 2025-10-18 23:20:45,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 19:21:04] 2025-10-18 23:20:47,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340322547520)>', '<ExcThread(monitor, started 140339574720256)>']
[2025-10-18 19:21:04] 2025-10-18 23:20:52,386 | INFO     | all workflow threads have been joined
[2025-10-18 19:21:04] 2025-10-18 23:20:52,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 19:21:04] 2025-10-18 23:20:52,386 | INFO     | traces error code: 0
[2025-10-18 19:21:04] 2025-10-18 23:20:52,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 19:21:04] 2025-10-18 23:21:03,815 | INFO     | PID=18916 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 19:21:04] 2025-10-18 23:21:03,816 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 19:21:04] 2025-10-18 23:21:03,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 19:21:04] 2025-10-18 23:21:03,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 19:21:04] 2025-10-18 23:21:03,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 19:21:04] 2025-10-18 23:21:03,816 | INFO     | [monitor] control thread has ended
[2025-10-18 19:21:04] 2025-10-18 23:21:03,912 [wrapper] ==== pilot stdout END ====
[2025-10-18 19:21:04] 2025-10-18 23:21:03,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 19:21:04] 2025-10-18 23:21:03,920 [wrapper] pilotpid: 18916
[2025-10-18 19:21:04] 2025-10-18 23:21:03,924 [wrapper] Pilot exit status: 0
[2025-10-18 19:21:04] 2025-10-18 23:21:03,939 [wrapper] pandaids: 6848041303
[2025-10-18 19:21:04] 2025-10-18 23:21:03,980 [wrapper] cleanup supervisor_pilot 22686 18917
[2025-10-18 19:21:04] 2025-10-18 23:21:03,984 [wrapper] Test setup, not cleaning
[2025-10-18 19:21:04] 2025-10-18 23:21:03,988 [wrapper] apfmon messages muted
[2025-10-18 19:21:04] 2025-10-18 23:21:03,992 [wrapper] ==== wrapper stdout END ====
[2025-10-18 19:21:04] 2025-10-18 23:21:03,996 [wrapper] ==== wrapper stderr END ====
[2025-10-18 19:21:04]  *** Error codes and diagnostics ***
[2025-10-18 19:21:04]     "exeErrorCode": 0,
[2025-10-18 19:21:04]     "exeErrorDiag": "",
[2025-10-18 19:21:04]     "pilotErrorCode": 0,
[2025-10-18 19:21:04]     "pilotErrorDiag": "",
[2025-10-18 19:21:04]  *** Listing of results directory ***
[2025-10-18 19:21:04] total 431228
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 13:39 pilot3.tar.gz
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 14:08 queuedata.json
[2025-10-18 19:21:04] -rwx------ 1 boincer umatlas     36292 Oct 18 14:10 runpilot2-wrapper.sh
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas       100 Oct 18 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 19:21:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 18:00 run_atlas
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas       105 Oct 18 18:00 job.xml
[2025-10-18 19:21:04] -rw-r--r-- 2 boincer umatlas 225941323 Oct 18 18:00 EVNT.46771634._001934.pool.root.1
[2025-10-18 19:21:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 18:00 start_atlas.sh
[2025-10-18 19:21:04] drwxrwx--x 2 boincer umatlas      4096 Oct 18 18:00 shared
[2025-10-18 19:21:04] -rw-r--r-- 2 boincer umatlas    569677 Oct 18 18:00 input.tar.gz
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas         0 Oct 18 18:00 boinc_lockfile
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas      2557 Oct 18 18:00 pandaJob.out
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas    976750 Oct 18 18:00 agis_schedconf.cvmfs.json
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas   1560740 Oct 18 18:00 agis_ddmendpoints.agis.ALL.json
[2025-10-18 19:21:04] drwx------ 5 boincer umatlas      4096 Oct 18 18:00 pilot3
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas 209565982 Oct 18 19:19 HITS.46771637._045880.pool.root.1
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas       529 Oct 18 19:20 boinc_task_state.xml
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas      1050 Oct 18 19:20 memory_monitor_summary.json
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas      5952 Oct 18 19:20 init_data.xml
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas    392001 Oct 18 19:20 log.46771637._045880.job.log.tgz.1
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas      7852 Oct 18 19:20 heartbeat.json
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 19:20 boinc_mmap_file
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas        27 Oct 18 19:20 wrapper_checkpoint.txt
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas       745 Oct 18 19:21 pilotlog.txt
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas        95 Oct 18 19:21 pilot_heartbeat.json
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas    693192 Oct 18 19:21 log.46771637._045880.job.log.1
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas       357 Oct 18 19:21 output.list
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas       620 Oct 18 19:21 runtime_log
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas   1105920 Oct 18 19:21 result.tar.gz
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas       659 Oct 18 19:21 zV1LDmkYQU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA7xNDmtcoFVn.diag
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 19:21 runtime_log.err
[2025-10-18 19:21:04] -rw-r--r-- 1 boincer umatlas     21873 Oct 18 19:21 stderr.txt
[2025-10-18 19:21:04] HITS file was successfully produced:
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas 209565982 Oct 18 19:19 shared/HITS.pool.root.1
[2025-10-18 19:21:04]  *** Contents of shared directory: ***
[2025-10-18 19:21:04] total 426964
[2025-10-18 19:21:04] -rw-r--r-- 2 boincer umatlas 225941323 Oct 18 18:00 ATLAS.root_0
[2025-10-18 19:21:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 18:00 start_atlas.sh
[2025-10-18 19:21:04] -rw-r--r-- 2 boincer umatlas    569677 Oct 18 18:00 input.tar.gz
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas 209565982 Oct 18 19:19 HITS.pool.root.1
[2025-10-18 19:21:04] -rw------- 1 boincer umatlas   1105920 Oct 18 19:21 result.tar.gz
19:21:05 (15223): run_atlas exited; CPU time 50520.152505
19:21:05 (15223): called boinc_finish(0)

</stderr_txt>
]]>

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