Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:19:47 (19304): wrapper (7.7.26015): starting
17:19:47 (19304): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 17:19:47] Arguments: --nthreads 12
[2025-10-18 17:19:47] Threads: 12
[2025-10-18 17:19:47] Checking for CVMFS
[2025-10-18 17:19:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 17:19:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 17:19:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 17:19:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 17:19:47] 2.11.2.0 2991 232007 96996 151865 0 56 19140164 20275201 1 130560 1 115499042 99.984 13776502 12687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 17:19:47] CVMFS is ok
[2025-10-18 17:19:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 17:19:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 17:19:47] Further information can be found at the LHC@home message board.
[2025-10-18 17:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 17:19:47] Checking for apptainer binary...
[2025-10-18 17:19:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 17:19:47] Running /usr/bin/apptainer --version
[2025-10-18 17:19:47] apptainer version 1.3.2-1.el7
[2025-10-18 17:19:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 17:19:48] c-205-32.aglt2.org
[2025-10-18 17:19:48] apptainer works
[2025-10-18 17:19:48] Set ATHENA_PROC_NUMBER=12
[2025-10-18 17:19:48] Set ATHENA_CORE_NUMBER=12
[2025-10-18 17:19:48] Starting ATLAS job with PandaID=6848040820
[2025-10-18 17:19:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 18:39:15]  *** The last 200 lines of the pilot log: ***
[2025-10-18 18:39:15]  protocol_id=None
[2025-10-18 18:39:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 18:39:15]  replicas=None
[2025-10-18 18:39:15]  scope=mc23_13p6TeV
[2025-10-18 18:39:15]  status=None
[2025-10-18 18:39:15]  status_code=0
[2025-10-18 18:39:15]  storage_token=
[2025-10-18 18:39:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6848040820/log.46771637._045545.job.log.tgz.1
[2025-10-18 18:39:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/61/log.46771637._045545.job.log.tgz.1
[2025-10-18 18:39:15]  workdir=None
[2025-10-18 18:39:15] ]
[2025-10-18 18:39:15] 2025-10-18 22:38:10,791 | INFO     | transferring file log.46771637._045545.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848040820/log.46771637._045545.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 18:39:15] 2025-10-18 22:38:10,791 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848040820/log.46771637._045545.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._045545.job
[2025-10-18 18:39:15] 2025-10-18 22:38:10,813 | INFO     | adding to output.list: log.46771637._045545.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/61/log.46771637._045545.job.log.tg
[2025-10-18 18:39:15] 2025-10-18 22:38:10,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 18:39:15] 2025-10-18 22:38:10,814 | INFO     | summary of transferred files:
[2025-10-18 18:39:15] 2025-10-18 22:38:10,815 | INFO     |  -- lfn=log.46771637._045545.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 18:39:15] 2025-10-18 22:38:10,815 | INFO     | stage-out finished correctly
[2025-10-18 18:39:15] 2025-10-18 22:38:11,310 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 18:39:15] 2025-10-18 22:38:11,387 | INFO     | job 6848040820 has state=finished
[2025-10-18 18:39:15] 2025-10-18 22:38:11,387 | INFO     | preparing for final server update for job 6848040820 in state='finished'
[2025-10-18 18:39:15] 2025-10-18 22:38:11,388 | INFO     | this job has now completed (state=finished)
[2025-10-18 18:39:15] 2025-10-18 22:38:11,388 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 18:39:15] 2025-10-18 22:38:11,388 | INFO     | log transfer has been attempted: DONE
[2025-10-18 18:39:15] 2025-10-18 22:38:11,388 | INFO     | job 6848040820 has finished - writing final server update
[2025-10-18 18:39:15] 2025-10-18 22:38:11,389 | INFO     | total number of processed events: 400 (read)
[2025-10-18 18:39:15] 2025-10-18 22:38:11,389 | INFO     | executing command: lscpu
[2025-10-18 18:39:15] 2025-10-18 22:38:11,449 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 18:39:15] 2025-10-18 22:38:11,961 | INFO     | time since job start (4688s) is within the limit (172800.0s)
[2025-10-18 18:39:15] 2025-10-18 22:38:13,966 | INFO     | time since job start (4690s) is within the limit (172800.0s)
[2025-10-18 18:39:15] 2025-10-18 22:38:15,299 | WARNING  | process 31496 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 18:39:15] 2025-10-18 22:38:15,299 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848040820/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 18:39:15] 2025-10-18 22:38:15,389 | INFO     | number of running child processes to parent process 31496: 1
[2025-10-18 18:39:15] 2025-10-18 22:38:15,389 | INFO     | maximum number of monitored processes: 6
[2025-10-18 18:39:15] 2025-10-18 22:38:15,967 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 18:39:15] 2025-10-18 22:38:15,971 | INFO     | time since job start (4692s) is within the limit (172800.0s)
[2025-10-18 18:39:15] 2025-10-18 22:38:15,972 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-18 18:39:15] 2025-10-18 22:38:15,974 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848040820/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 18:39:15] 2025-10-18 22:38:15,975 | INFO     | extracted standard info from prmon json
[2025-10-18 18:39:15] 2025-10-18 22:38:15,975 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 18:39:15] 2025-10-18 22:38:15,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 18:39:15] 2025-10-18 22:38:15,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 18:39:15] 2025-10-18 22:38:15,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 18:39:15] 2025-10-18 22:38:15,978 | INFO     | fitting pss+swap vs Time
[2025-10-18 18:39:15] 2025-10-18 22:38:15,978 | INFO     | sum of square deviations: 106336877.5
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | sum of deviations: -9512641827.999998
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | mean x: 1760824841.5
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | mean y: 2840080.7714285715
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | -- intersect: 157522004013.66354
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | intersect: 157522004013.66354
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | chi2: 0.06227536971801154
[2025-10-18 18:39:15] 2025-10-18 22:38:15,979 | INFO     | -- intersect: 157522004013.66354
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | current memory leak: -89.46 B/s (using 70 data points, chi2=0.06)
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | ..............................
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | . Timing measurements:
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | . get job = 0 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | . initial setup = 2 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,980 | INFO     | . payload setup = 7 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,981 | INFO     | . stage-in = 0 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,981 | INFO     | . payload execution = 4660 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,981 | INFO     | . stage-out = 0 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,981 | INFO     | . log creation = 0 s
[2025-10-18 18:39:15] 2025-10-18 22:38:15,981 | INFO     | ..............................
[2025-10-18 18:39:15] 2025-10-18 22:38:16,063 | INFO     | 
[2025-10-18 18:39:15] 2025-10-18 22:38:16,064 | INFO     | job summary report
[2025-10-18 18:39:15] 2025-10-18 22:38:16,064 | INFO     | --------------------------------------------------
[2025-10-18 18:39:15] 2025-10-18 22:38:16,064 | INFO     | PanDA job id: 6848040820
[2025-10-18 18:39:15] 2025-10-18 22:38:16,064 | INFO     | task id: 46771637
[2025-10-18 18:39:15] 2025-10-18 22:38:16,064 | INFO     | errors: (none)
[2025-10-18 18:39:15] 2025-10-18 22:38:16,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 18:39:15] 2025-10-18 22:38:16,065 | INFO     | pilot state: finished 
[2025-10-18 18:39:15] 2025-10-18 22:38:16,065 | INFO     | transexitcode: 0
[2025-10-18 18:39:15] 2025-10-18 22:38:16,065 | INFO     | exeerrorcode: 0
[2025-10-18 18:39:15] 2025-10-18 22:38:16,065 | INFO     | exeerrordiag: 
[2025-10-18 18:39:15] 2025-10-18 22:38:16,065 | INFO     | exitcode: 0
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | exitmsg: OK
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | cpuconsumptiontime: 50252 s
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | nevents: 400
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | neventsw: 0
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | pid: 31496
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | pgrp: 31496
[2025-10-18 18:39:15] 2025-10-18 22:38:16,066 | INFO     | corecount: 12
[2025-10-18 18:39:15] 2025-10-18 22:38:16,067 | INFO     | event service: False
[2025-10-18 18:39:15] 2025-10-18 22:38:16,067 | INFO     | sizes: {0: 2348929, 5: 2349191, 11: 2349247, 4671: 2375412, 4672: 2384466, 4677: 2384604}
[2025-10-18 18:39:15] 2025-10-18 22:38:16,067 | INFO     | --------------------------------------------------
[2025-10-18 18:39:15] 2025-10-18 22:38:16,067 | INFO     | 
[2025-10-18 18:39:15] 2025-10-18 22:38:16,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 18:39:15] 2025-10-18 22:38:16,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 18:39:15] 2025-10-18 22:38:16,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 18:39:15] 2025-10-18 22:38:16,095 | INFO     | job 6848040820 has completed (purged errors)
[2025-10-18 18:39:15] 2025-10-18 22:38:16,096 | INFO     | overall cleanup function is called
[2025-10-18 18:39:15] 2025-10-18 22:38:17,103 | INFO     | --- collectZombieJob: --- 10, [31496]
[2025-10-18 18:39:15] 2025-10-18 22:38:17,104 | INFO     | zombie collector waiting for pid 31496
[2025-10-18 18:39:15] 2025-10-18 22:38:17,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 18:39:15] 2025-10-18 22:38:17,115 | INFO     | collected zombie processes
[2025-10-18 18:39:15] 2025-10-18 22:38:17,115 | INFO     | will attempt to kill all subprocesses of pid=31496
[2025-10-18 18:39:15] 2025-10-18 22:38:17,205 | INFO     | process IDs to be killed: [31496] (in reverse order)
[2025-10-18 18:39:15] 2025-10-18 22:38:17,260 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 18:39:15] 2025-10-18 22:38:17,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 18:39:15] 2025-10-18 22:38:17,264 | INFO     | did not find any defunct processes belonging to 31496
[2025-10-18 18:39:15] 2025-10-18 22:38:17,268 | INFO     | did not find any defunct processes belonging to 31496
[2025-10-18 18:39:15] 2025-10-18 22:38:17,268 | INFO     | ready for new job
[2025-10-18 18:39:15] 2025-10-18 22:38:17,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 18:39:15] 2025-10-18 22:38:17,269 | INFO     | ***************************************
[2025-10-18 18:39:15] 2025-10-18 22:38:17,269 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 18:39:15] 2025-10-18 22:38:17,269 | INFO     | ***************************************
[2025-10-18 18:39:15] 2025-10-18 22:38:17,269 | INFO     | 
[2025-10-18 18:39:15] 2025-10-18 22:38:17,270 | INFO     | architecture information:
[2025-10-18 18:39:15] 2025-10-18 22:38:17,270 | INFO     | executing command: cat /etc/os-release
[2025-10-18 18:39:15] 2025-10-18 22:38:17,285 | INFO     | cat /etc/os-release:
[2025-10-18 18:39:15] NAME="CentOS Linux"
[2025-10-18 18:39:15] VERSION="7 (Core)"
[2025-10-18 18:39:15] ID="centos"
[2025-10-18 18:39:15] ID_LIKE="rhel fedora"
[2025-10-18 18:39:15] VERSION_ID="7"
[2025-10-18 18:39:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 18:39:15] ANSI_COLOR="0;31"
[2025-10-18 18:39:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 18:39:15] HOME_URL="https://www.centos.org/"
[2025-10-18 18:39:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 18:39:15] 
[2025-10-18 18:39:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 18:39:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 18:39:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 18:39:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 18:39:15] 
[2025-10-18 18:39:15] 2025-10-18 22:38:17,285 | INFO     | ***************************************
[2025-10-18 18:39:15] 2025-10-18 22:38:17,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 18:39:15] 2025-10-18 22:38:17,804 | INFO     | sufficient remaining disk space (29330767872 B)
[2025-10-18 18:39:15] 2025-10-18 22:38:17,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 18:39:15] 2025-10-18 22:38:17,805 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 18:39:15] 2025-10-18 22:38:17,805 | INFO     | update_server=False
[2025-10-18 18:39:15] 2025-10-18 22:38:17,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 18:39:15] 2025-10-18 22:38:17,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 18:39:15] 2025-10-18 22:38:17,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:39:15] 2025-10-18 22:38:17,806 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-18 18:39:15] 2025-10-18 22:38:17,807 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 18:39:15] 2025-10-18 22:38:17,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 18:39:15] 2025-10-18 22:38:17,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 18:39:15] 2025-10-18 22:38:17,892 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 18:39:15] 2025-10-18 22:38:17,892 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 18:39:15] 2025-10-18 22:38:17,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:39:15] 2025-10-18 22:38:17,892 | INFO     | will abort loop
[2025-10-18 18:39:15] 2025-10-18 22:38:18,811 | INFO     | [job] retrieve thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:18,812 | INFO     | [job] queue monitor thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:18,877 | INFO     | all data control threads have been joined
[2025-10-18 18:39:15] 2025-10-18 22:38:18,898 | INFO     | [job] job monitor thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:18,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 18:39:15] 2025-10-18 22:38:18,933 | INFO     | all payload control threads have been joined
[2025-10-18 18:39:15] 2025-10-18 22:38:19,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,052 | INFO     | [payload] validate_post thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,293 | INFO     | [job] validate thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,427 | INFO     | all job control threads have been joined
[2025-10-18 18:39:15] 2025-10-18 22:38:19,460 | INFO     | [payload] failed_post thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,700 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,704 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,828 | INFO     | [data] copytool_in thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,882 | INFO     | [data] control thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,938 | INFO     | [payload] control thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:19,978 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:20,428 | INFO     | [job] control thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:20,913 | INFO     | [data] copytool_out thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:38:21,811 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 18:39:15] 2025-10-18 22:39:10,209 | INFO     | [monitor] cgroup control has ended
[2025-10-18 18:39:15] 2025-10-18 22:39:10,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303666169664)>', '<ExcThread(monitor, started 140302933280512)>']
[2025-10-18 18:39:15] 2025-10-18 22:39:11,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 18:39:15] 2025-10-18 22:39:11,037 | INFO     | [monitor] control thread has ended
[2025-10-18 18:39:15] 2025-10-18 22:39:15,324 | INFO     | all workflow threads have been joined
[2025-10-18 18:39:15] 2025-10-18 22:39:15,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 18:39:15] 2025-10-18 22:39:15,332 | INFO     | traces error code: 0
[2025-10-18 18:39:15] 2025-10-18 22:39:15,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 18:39:15] 2025-10-18 22:39:15,424 [wrapper] ==== pilot stdout END ====
[2025-10-18 18:39:15] 2025-10-18 22:39:15,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 18:39:15] 2025-10-18 22:39:15,431 [wrapper] pilotpid: 23123
[2025-10-18 18:39:15] 2025-10-18 22:39:15,434 [wrapper] Pilot exit status: 0
[2025-10-18 18:39:15] 2025-10-18 22:39:15,450 [wrapper] pandaids: 6848040820
[2025-10-18 18:39:15] 2025-10-18 22:39:15,493 [wrapper] cleanup supervisor_pilot 18493 23124
[2025-10-18 18:39:15] 2025-10-18 22:39:15,497 [wrapper] Test setup, not cleaning
[2025-10-18 18:39:15] 2025-10-18 22:39:15,500 [wrapper] apfmon messages muted
[2025-10-18 18:39:15] 2025-10-18 22:39:15,504 [wrapper] ==== wrapper stdout END ====
[2025-10-18 18:39:15] 2025-10-18 22:39:15,507 [wrapper] ==== wrapper stderr END ====
[2025-10-18 18:39:15]  *** Error codes and diagnostics ***
[2025-10-18 18:39:15]     "exeErrorCode": 0,
[2025-10-18 18:39:15]     "exeErrorDiag": "",
[2025-10-18 18:39:15]     "pilotErrorCode": 0,
[2025-10-18 18:39:15]     "pilotErrorDiag": "",
[2025-10-18 18:39:15]  *** Listing of results directory ***
[2025-10-18 18:39:15] total 433656
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 13:39 pilot3.tar.gz
[2025-10-18 18:39:15] -rwx------ 1 boincer umatlas     36292 Oct 18 13:40 runpilot2-wrapper.sh
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 13:40 queuedata.json
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas       100 Oct 18 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 18:39:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 17:19 run_atlas
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas       105 Oct 18 17:19 job.xml
[2025-10-18 18:39:15] -rw-r--r-- 2 boincer umatlas 229447166 Oct 18 17:19 EVNT.46771634._001920.pool.root.1
[2025-10-18 18:39:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 17:19 start_atlas.sh
[2025-10-18 18:39:15] drwxrwx--x 2 boincer umatlas      4096 Oct 18 17:19 shared
[2025-10-18 18:39:15] -rw-r--r-- 2 boincer umatlas    569671 Oct 18 17:19 input.tar.gz
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas         0 Oct 18 17:19 boinc_lockfile
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 17:19 pandaJob.out
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas    976750 Oct 18 17:20 agis_schedconf.cvmfs.json
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas   1560740 Oct 18 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-18 18:39:15] drwx------ 5 boincer umatlas      4096 Oct 18 17:20 pilot3
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 18:37 init_data.xml
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas 208601715 Oct 18 18:37 HITS.46771637._045545.pool.root.1
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas       530 Oct 18 18:37 boinc_task_state.xml
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas        95 Oct 18 18:38 pilot_heartbeat.json
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas      1051 Oct 18 18:38 memory_monitor_summary.json
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas    379316 Oct 18 18:38 log.46771637._045545.job.log.tgz.1
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas      7859 Oct 18 18:38 heartbeat.json
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 18:39 boinc_mmap_file
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas        27 Oct 18 18:39 wrapper_checkpoint.txt
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas      4738 Oct 18 18:39 pilotlog.txt
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas    678929 Oct 18 18:39 log.46771637._045545.job.log.1
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas       357 Oct 18 18:39 output.list
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas       620 Oct 18 18:39 runtime_log
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas   1075200 Oct 18 18:39 result.tar.gz
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 18:39 runtime_log.err
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas       659 Oct 18 18:39 JY0MDmu5PU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmadcMDmjY29Vo.diag
[2025-10-18 18:39:15] -rw-r--r-- 1 boincer umatlas     21671 Oct 18 18:39 stderr.txt
[2025-10-18 18:39:15] HITS file was successfully produced:
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas 208601715 Oct 18 18:37 shared/HITS.pool.root.1
[2025-10-18 18:39:15]  *** Contents of shared directory: ***
[2025-10-18 18:39:15] total 429416
[2025-10-18 18:39:15] -rw-r--r-- 2 boincer umatlas 229447166 Oct 18 17:19 ATLAS.root_0
[2025-10-18 18:39:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 17:19 start_atlas.sh
[2025-10-18 18:39:15] -rw-r--r-- 2 boincer umatlas    569671 Oct 18 17:19 input.tar.gz
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas 208601715 Oct 18 18:37 HITS.pool.root.1
[2025-10-18 18:39:15] -rw------- 1 boincer umatlas   1075200 Oct 18 18:39 result.tar.gz
18:39:17 (19304): run_atlas exited; CPU time 50221.579267
18:39:17 (19304): called boinc_finish(0)

</stderr_txt>
]]>

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